CircRNA Information

General Information
circRNA Basic Information
CircID chrX:154349493|154349743
Strand +
CircType exon
Host Gene ENSG00000196924.13;
Algorism CIRI2;
Sequence CTATACCCCCATGGCACCTGGCAGCTACCTCATCTCCATCAAGTACGGCGGCCCCTACCACATTGGGGGCAGCCCCTTCAAGGCCAAAGTCACAGGTGAGCCTGGGGCCAAGCTATTGGCATCTGCCCAACGCCCGGCACCACAGCCACCTCTTAGCCCCACCCACTCTGCCTTGCAGGCCCCCGTCTCGTCAGCAACCACAGCCTCCACGAGACATCATCAGTGTTTGTAGACTCTCTGACCAAGGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:154349493|154349743 hsa-let-7b-5p 0 0 1
chrX:154349493|154349743 hsa-let-7b-3p 0 0 1
chrX:154349493|154349743 hsa-let-7c-5p 0 0 1
chrX:154349493|154349743 hsa-let-7c-3p 0 0 1
chrX:154349493|154349743 hsa-let-7d-5p 0 0 1
chrX:154349493|154349743 hsa-let-7d-3p 0 0 1
chrX:154349493|154349743 hsa-let-7e-5p 0 0 1
chrX:154349493|154349743 hsa-let-7e-3p 0 0 1
chrX:154349493|154349743 hsa-miR-22-5p 0 0 1
chrX:154349493|154349743 hsa-miR-22-3p 0 0 1
chrX:154349493|154349743 hsa-miR-98-5p 0 0 1
chrX:154349493|154349743 hsa-miR-98-3p 0 0 1
chrX:154349493|154349743 hsa-let-7g-5p 0 0 1
chrX:154349493|154349743 hsa-let-7g-3p 0 0 1
chrX:154349493|154349743 hsa-let-7i-5p 0 0 1
chrX:154349493|154349743 hsa-let-7i-3p 0 0 1
chrX:154349493|154349743 hsa-miR-141-5p 0 0 1
chrX:154349493|154349743 hsa-miR-141-3p 0 0 1
chrX:154349493|154349743 hsa-miR-143-5p 0 0 1
chrX:154349493|154349743 hsa-miR-143-3p 0 0 1
chrX:154349493|154349743 hsa-miR-134-5p 0 0 1
chrX:154349493|154349743 hsa-miR-134-3p 0 0 1
chrX:154349493|154349743 hsa-miR-200a-5p 0 0 1
chrX:154349493|154349743 hsa-miR-200a-3p 0 0 1
chrX:154349493|154349743 hsa-miR-328-5p 0 0 1
chrX:154349493|154349743 hsa-miR-328-3p 0 0 1
chrX:154349493|154349743 hsa-miR-484 0 0 1
chrX:154349493|154349743 hsa-miR-202-5p 0 0 1
chrX:154349493|154349743 hsa-miR-202-3p 0 0 1
chrX:154349493|154349743 hsa-miR-620 0 0 1
chrX:154349493|154349743 hsa-miR-650 0 0 1
chrX:154349493|154349743 hsa-miR-1293 0 0 1
chrX:154349493|154349743 hsa-miR-1270 1 1 1
chrX:154349493|154349743 hsa-miR-1283 0 0 1
chrX:154349493|154349743 hsa-miR-485-5p 0 1 1
chrX:154349493|154349743 hsa-miR-483-5p 0 1 1
chrX:154349493|154349743 hsa-miR-628-5p 0 0 1
chrX:154349493|154349743 hsa-miR-324-3p 0 0 1
chrX:154349493|154349743 hsa-let-7a 0 0 1
chrX:154349493|154349743 hsa-let-7f 0 0 1
chrX:154349493|154349743 hsa-miR-608 1 0 0
chrX:154349493|154349743 hsa-miR-612 1 0 0
chrX:154349493|154349743 hsa-miR-638 1 0 0
chrX:154349493|154349743 hsa-miR-663a 1 0 0
chrX:154349493|154349743 hsa-miR-760 1 0 0
chrX:154349493|154349743 hsa-miR-1202 1 1 0
chrX:154349493|154349743 hsa-miR-2861 1 0 0
chrX:154349493|154349743 hsa-miR-3141 1 0 0
chrX:154349493|154349743 hsa-miR-3147 0 1 0
chrX:154349493|154349743 hsa-miR-3155a 0 1 0
chrX:154349493|154349743 hsa-miR-3188 1 0 0
chrX:154349493|154349743 hsa-miR-4270 1 0 0
chrX:154349493|154349743 hsa-miR-3936 1 0 0
chrX:154349493|154349743 hsa-miR-4443 0 1 0
chrX:154349493|154349743 hsa-miR-4447 0 1 0
chrX:154349493|154349743 hsa-miR-3155b 0 1 0
chrX:154349493|154349743 hsa-miR-4481 1 0 0
chrX:154349493|154349743 hsa-miR-4487 1 0 0
chrX:154349493|154349743 hsa-miR-4489 1 0 0
chrX:154349493|154349743 hsa-miR-4498 1 0 0
chrX:154349493|154349743 hsa-miR-4502 0 1 0
chrX:154349493|154349743 hsa-miR-2392 1 0 0
chrX:154349493|154349743 hsa-miR-4507 1 0 0
chrX:154349493|154349743 hsa-miR-4525 1 0 0
chrX:154349493|154349743 hsa-miR-4534 1 1 0
chrX:154349493|154349743 hsa-miR-4651 1 0 0
chrX:154349493|154349743 hsa-miR-4656 1 0 0
chrX:154349493|154349743 hsa-miR-4741 1 0 0
chrX:154349493|154349743 hsa-miR-5093 1 0 0
chrX:154349493|154349743 hsa-miR-5787 1 0 0
chrX:154349493|154349743 hsa-miR-6088 1 0 0
chrX:154349493|154349743 hsa-miR-6132 1 0 0
chrX:154349493|154349743 hsa-miR-6860 1 0 0
chrX:154349493|154349743 hsa-miR-7150 1 0 0
chrX:154349493|154349743 hsa-miR-7974 0 1 0
chrX:154349493|154349743 hsa-miR-8075 1 0 0
chrX:154349493|154349743 hsa-miR-8082 0 1 0
chrX:154349493|154349743 hsa-miR-12114 1 0 0
chrX:154349493|154349743 hsa-miR-4433b-3p 1 0 0
chrX:154349493|154349743 hsa-miR-128-1-5p 0 1 0
chrX:154349493|154349743 hsa-miR-6747-5p 1 0 0
chrX:154349493|154349743 hsa-miR-4726-3p 0 1 0
chrX:154349493|154349743 hsa-miR-6765-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6861-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6857-5p 1 0 0
chrX:154349493|154349743 hsa-miR-4687-3p 1 0 0
chrX:154349493|154349743 hsa-miR-125a-3p 1 0 0
chrX:154349493|154349743 hsa-miR-486-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6799-5p 1 0 0
chrX:154349493|154349743 hsa-miR-7114-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6089 1 0 0
chrX:154349493|154349743 hsa-miR-6880-5p 1 0 0
chrX:154349493|154349743 hsa-miR-7847-3p 1 0 0
chrX:154349493|154349743 hsa-miR-7160-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6820-5p 1 0 0
chrX:154349493|154349743 hsa-miR-874-5p 0 1 0
chrX:154349493|154349743 hsa-miR-6741-5p 1 0 0
chrX:154349493|154349743 hsa-miR-4474-3p 1 0 0
chrX:154349493|154349743 hsa-miR-6759-5p 1 0 0
chrX:154349493|154349743 hsa-miR-197-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6742-5p 1 0 0
chrX:154349493|154349743 hsa-miR-3151-5p 0 1 0
chrX:154349493|154349743 hsa-miR-6748-5p 1 1 0
chrX:154349493|154349743 hsa-miR-6793-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6796-5p 0 1 0
chrX:154349493|154349743 hsa-miR-185-3p 0 1 0
chrX:154349493|154349743 hsa-miR-4697-3p 1 0 0
chrX:154349493|154349743 hsa-miR-5006-5p 1 1 0
chrX:154349493|154349743 hsa-miR-6735-3p 1 0 0
chrX:154349493|154349743 hsa-miR-6786-5p 1 0 0
chrX:154349493|154349743 hsa-miR-1229-5p 1 0 0
chrX:154349493|154349743 hsa-miR-1228-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6749-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6501-5p 1 0 0
chrX:154349493|154349743 hsa-miR-4787-5p 1 0 0
chrX:154349493|154349743 hsa-miR-2276-3p 0 1 0
chrX:154349493|154349743 hsa-miR-6877-5p 1 0 0
chrX:154349493|154349743 hsa-miR-664b-5p 0 1 0
chrX:154349493|154349743 hsa-let-7a-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6811-3p 0 1 0
chrX:154349493|154349743 hsa-miR-6801-5p 1 1 0
chrX:154349493|154349743 hsa-miR-4746-3p 1 0 0
chrX:154349493|154349743 hsa-miR-1207-5p 1 0 0
chrX:154349493|154349743 hsa-miR-1233-5p 1 0 0
chrX:154349493|154349743 hsa-miR-4763-3p 1 0 0
chrX:154349493|154349743 hsa-miR-6769b-5p 1 1 0
chrX:154349493|154349743 hsa-miR-6778-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6787-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6865-5p 0 1 0
chrX:154349493|154349743 hsa-miR-6870-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6893-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6726-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6752-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6754-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6756-5p 1 1 0
chrX:154349493|154349743 hsa-miR-6769a-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6815-5p 1 1 0
chrX:154349493|154349743 hsa-miR-6851-5p 1 1 0
chrX:154349493|154349743 hsa-miR-7110-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6779-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6808-5p 1 1 0
chrX:154349493|154349743 hsa-miR-6879-5p 1 1 0
chrX:154349493|154349743 hsa-miR-4728-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6836-5p 1 0 0
chrX:154349493|154349743 hsa-miR-10396a-5p 1 0 0
chrX:154349493|154349743 hsa-miR-10396b-5p 1 0 0
chrX:154349493|154349743 hsa-miR-1237-5p 1 0 0
chrX:154349493|154349743 hsa-miR-1909-3p 1 0 0
chrX:154349493|154349743 hsa-miR-449c-5p 1 0 0
chrX:154349493|154349743 hsa-miR-4632-5p 1 1 0
chrX:154349493|154349743 hsa-miR-4701-3p 1 0 0
chrX:154349493|154349743 hsa-miR-4745-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6735-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6846-5p 1 1 0
chrX:154349493|154349743 hsa-miR-6848-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6858-5p 1 0 0
chrX:154349493|154349743 hsa-miR-3187-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6831-5p 1 1 0
chrX:154349493|154349743 hsa-miR-6845-5p 1 0 0
chrX:154349493|154349743 hsa-miR-939-5p 1 0 0
chrX:154349493|154349743 hsa-miR-4758-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6511a-5p 1 1 0
chrX:154349493|154349743 hsa-miR-3085-5p 0 1 0
chrX:154349493|154349743 hsa-miR-6856-5p 1 0 0
chrX:154349493|154349743 hsa-miR-1271-3p 1 0 0
chrX:154349493|154349743 hsa-miR-7843-5p 1 0 0
chrX:154349493|154349743 hsa-miR-1914-3p 1 0 0
chrX:154349493|154349743 hsa-miR-4700-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6753-3p 1 0 0
chrX:154349493|154349743 hsa-miR-6762-5p 1 0 0
chrX:154349493|154349743 hsa-miR-6775-3p 1 0 0
chrX:154349493|154349743 hsa-miR-6884-5p 0 1 0
chrX:154349493|154349743 hsa-miR-196b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chrX:154349493|154349743
ORF Type ORF1
Protein Length 73
Nucleotide Length 222
Protein Sequence MAPGSYLISIKYGGPYHIGGSPFKAKVTGEPGAKLLASAQRPAPQPPLSPTHSALQAPVSSATTASTRHHQCL
Nucleotide Sequence ATGGCACCTGGCAGCTACCTCATCTCCATCAAGTACGGCGGCCCCTACCACATTGGGGGCAGCCCCTTCAAGGCCAAAGTCACAGGTGAGCCTGGGGCCAAGCTATTGGCATCTGCCCAACGCCCGGCACCACAGCCACCTCTTAGCCCCACCCACTCTGCCTTGCAGGCCCCCGTCTCGTCAGCAACCACAGCCTCCACGAGACATCATCAGTGTTTGTAG
CircID chrX:154349493|154349743
ORF Type ORF2
Protein Length 78
Nucleotide Length 234
Protein Sequence MAATSSPSSTAAPTTLGAAPSRPKSQVSLGPSYWHLPNARHHSHLLAPPTLPCRPPSRQQPQPPRDIISVCRLSDQGH
Nucleotide Sequence CTGGCAGCTACCTCATCTCCATCAAGTACGGCGGCCCCTACCACATTGGGGGCAGCCCCTTCAAGGCCAAAGTCACAGGTGAGCCTGGGGCCAAGCTATTGGCATCTGCCCAACGCCCGGCACCACAGCCACCTCTTAGCCCCACCCACTCTGCCTTGCAGGCCCCCGTCTCGTCAGCAACCACAGCCTCCACGAGACATCATCAGTGTTTGTAGACTCTCTGACCAAGGCCAC
CircID chrX:154349493|154349743
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MVRESTNTDDVSWRLWLLTRRGPARQSGWG
Nucleotide Sequence TTGGTCAGAGAGTCTACAAACACTGATGATGTCTCGTGGAGGCTGTGGTTGCTGACGAGACGGGGGCCTGCAAGGCAGAGTGGGTGGGGCTAA
CircID chrX:154349493|154349743
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MAPGSYLISIKYGGPYHIGGSPFKAKVTGPRLVSNHSLHETSSVFVDSLTKA
Nucleotide Sequence ATGGCACCTGGCAGCTACCTCATCTCCATCAAGTACGGCGGCCCCTACCACATTGGGGGCAGCCCCTTCAAGGCCAAAGTCACAGGCCCCCGTCTCGTCAGCAACCACAGCCTCCACGAGACATCATCAGTGTTTGTAGACTCTCTGACCAAGGCC
CircID chrX:154349493|154349743
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MAATSSPSSTAAPTTLGAAPSRPKSQAPVSSATTASTRHHQCL
Nucleotide Sequence CTGGCAGCTACCTCATCTCCATCAAGTACGGCGGCCCCTACCACATTGGGGGCAGCCCCTTCAAGGCCAAAGTCACAGGCCCCCGTCTCGTCAGCAACCACAGCCTCCACGAGACATCATCAGTGTTTGTAG
CircID chrX:154349493|154349743
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MVRESTNTDDVSWRLWLLTRRGPVTLALKGLPPMW
Nucleotide Sequence TTGGTCAGAGAGTCTACAAACACTGATGATGTCTCGTGGAGGCTGTGGTTGCTGACGAGACGGGGGCCTGTGACTTTGGCCTTGAAGGGGCTGCCCCCAATGTGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab