CircRNA Information

General Information
circRNA Basic Information
CircID chrX:154352181|154352423
Strand -
CircType exon
Host Gene ENSG00000196924.13;
Algorism CIRI2;
Sequence CTGGCACTCCAGCTTCAGCTCTCTCCAGGCCAGGGCCCCCAGCTCGGACCTTGTGGGCTCCCCCTTCCCCTAGGGGCCCCACGGTGAACTGGAAGGGGCTCCCAGGCACGTGCTGGCCCTTGTACTTCACGCTGACTGTGTGTGTGCCCATCTCAGCGGGAACAAAGCGGATGCAGTAGGTGTGGTTCTCCCCTTCCACGATCTCGGCCTCATGGGTCTTGCCCGATGGGCTGGTCACCTGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:154352181|154352423 hsa-miR-31-5p 0 0 1
chrX:154352181|154352423 hsa-miR-31-3p 0 0 1
chrX:154352181|154352423 hsa-miR-217-5p 0 0 1
chrX:154352181|154352423 hsa-miR-217-3p 0 0 1
chrX:154352181|154352423 hsa-miR-122-5p 0 0 1
chrX:154352181|154352423 hsa-miR-122-3p 0 0 1
chrX:154352181|154352423 hsa-miR-143-5p 0 0 1
chrX:154352181|154352423 hsa-miR-143-3p 0 0 1
chrX:154352181|154352423 hsa-miR-185-5p 0 0 1
chrX:154352181|154352423 hsa-miR-185-3p 0 0 1
chrX:154352181|154352423 hsa-miR-375-5p 0 0 1
chrX:154352181|154352423 hsa-miR-375-3p 0 0 1
chrX:154352181|154352423 hsa-miR-589-5p 0 0 1
chrX:154352181|154352423 hsa-miR-589-3p 0 0 1
chrX:154352181|154352423 hsa-miR-624-5p 0 0 1
chrX:154352181|154352423 hsa-miR-624-3p 0 0 1
chrX:154352181|154352423 hsa-miR-637 0 0 1
chrX:154352181|154352423 hsa-miR-661 0 0 1
chrX:154352181|154352423 hsa-miR-920 0 0 1
chrX:154352181|154352423 hsa-miR-939-5p 0 0 1
chrX:154352181|154352423 hsa-miR-939-3p 0 0 1
chrX:154352181|154352423 hsa-miR-1228-5p 0 0 1
chrX:154352181|154352423 hsa-miR-1228-3p 0 0 1
chrX:154352181|154352423 hsa-miR-1291 0 0 1
chrX:154352181|154352423 hsa-miR-127-5p 0 0 1
chrX:154352181|154352423 hsa-miR-125a-3p 0 0 1
chrX:154352181|154352423 hsa-miR-1225-3p 0 0 1
chrX:154352181|154352423 hsa-miR-145-5p 0 0 1
chrX:154352181|154352423 hsa-miR-296-5p 0 0 1
chrX:154352181|154352423 hsa-miR-615-3p 0 0 1
chrX:154352181|154352423 hsa-miR-324-5p 0 0 1
chrX:154352181|154352423 hsa-miR-509-3-5p 0 0 1
chrX:154352181|154352423 hsa-miR-509-5p 0 0 1
chrX:154352181|154352423 hsa-miR-550 0 0 1
chrX:154352181|154352423 hsa-miR-1254 0 0 1
chrX:154352181|154352423 hsa-miR-638 1 0 0
chrX:154352181|154352423 hsa-miR-762 1 0 0
chrX:154352181|154352423 hsa-miR-4538 1 0 0
chrX:154352181|154352423 hsa-miR-4656 1 0 0
chrX:154352181|154352423 hsa-miR-4739 1 0 0
chrX:154352181|154352423 hsa-miR-6860 1 0 0
chrX:154352181|154352423 hsa-miR-8485 0 1 0
chrX:154352181|154352423 hsa-miR-6734-5p 1 0 0
chrX:154352181|154352423 hsa-miR-4731-5p 1 0 0
chrX:154352181|154352423 hsa-miR-671-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6825-5p 1 0 0
chrX:154352181|154352423 hsa-miR-7114-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6089 1 0 0
chrX:154352181|154352423 hsa-miR-6757-5p 1 0 0
chrX:154352181|154352423 hsa-miR-874-3p 1 0 0
chrX:154352181|154352423 hsa-miR-6827-5p 1 1 0
chrX:154352181|154352423 hsa-miR-6798-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6782-5p 1 0 0
chrX:154352181|154352423 hsa-miR-149-3p 1 0 0
chrX:154352181|154352423 hsa-miR-6824-5p 0 1 0
chrX:154352181|154352423 hsa-miR-6877-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6895-5p 0 1 0
chrX:154352181|154352423 hsa-miR-1207-5p 1 0 0
chrX:154352181|154352423 hsa-miR-4763-3p 1 0 0
chrX:154352181|154352423 hsa-miR-6787-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6870-5p 1 0 0
chrX:154352181|154352423 hsa-miR-1343-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6726-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6743-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6756-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6803-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6851-5p 1 0 0
chrX:154352181|154352423 hsa-miR-7107-5p 1 1 0
chrX:154352181|154352423 hsa-miR-1249-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6779-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6797-5p 1 0 0
chrX:154352181|154352423 hsa-miR-3620-5p 1 0 0
chrX:154352181|154352423 hsa-miR-4728-5p 1 0 0
chrX:154352181|154352423 hsa-miR-5196-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6780b-5p 1 0 0
chrX:154352181|154352423 hsa-miR-1237-5p 1 0 0
chrX:154352181|154352423 hsa-miR-328-5p 1 0 0
chrX:154352181|154352423 hsa-miR-4649-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6794-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6846-5p 1 0 0
chrX:154352181|154352423 hsa-miR-4723-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6885-5p 1 0 0
chrX:154352181|154352423 hsa-miR-4664-5p 1 0 0
chrX:154352181|154352423 hsa-miR-4646-5p 1 0 0
chrX:154352181|154352423 hsa-miR-6807-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:154352181|154352423
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence LALQLQLSPGQGPQLGPCGLPLPLGAPR
Nucleotide Sequence CTGGCACTCCAGCTTCAGCTCTCTCCAGGCCAGGGCCCCCAGCTCGGACCTTGTGGGCTCCCCCTTCCCCTAGGGGCCCCACGGTGA
CircID chrX:154352181|154352423
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MCVCPSQREQSGCSRCGSPLPRSRPHGSCPMGWSPG
Nucleotide Sequence CTGTGTGTGTGCCCATCTCAGCGGGAACAAAGCGGATGCAGTAGGTGTGGTTCTCCCCTTCCACGATCTCGGCCTCATGGGTCTTGCCCGATGGGCTGGTCACCTGGG
CircID chrX:154352181|154352423
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MEGAPRHVLALVLHADCVCAHLSGNKADAVGVVLPFHDLGLMGLARWAGHL
Nucleotide Sequence CTGGAAGGGGCTCCCAGGCACGTGCTGGCCCTTGTACTTCACGCTGACTGTGTGTGTGCCCATCTCAGCGGGAACAAAGCGGATGCAGTAGGTGTGGTTCTCCCCTTCCACGATCTCGGCCTCATGGGTCTTGCCCGATGGGCTGGTCACCTG
CircID chrX:154352181|154352423
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence MWAPPSPRGPTVNWKGLPGTCWPLYFTLTVCVPISAGTKRMQ
Nucleotide Sequence TTGTGGGCTCCCCCTTCCCCTAGGGGCCCCACGGTGAACTGGAAGGGGCTCCCAGGCACGTGCTGGCCCTTGTACTTCACGCTGACTGTGTGTGTGCCCATCTCAGCGGGAACAAAGCGGATGCAGTAG
CircID chrX:154352181|154352423
ORF Type ORF5
Protein Length 28
Nucleotide Length 87
Protein Sequence MRPRSWKGRTTPTASALFPLRWAHTQSA
Nucleotide Sequence ATGAGGCCGAGATCGTGGAAGGGGAGAACCACACCTACTGCATCCGCTTTGTTCCCGCTGAGATGGGCACACACACAGTCAGCGTGA
CircID chrX:154352181|154352423
ORF Type ORF6
Protein Length 50
Nucleotide Length 150
Protein Sequence MGTHTVSVKYKGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEAGVP
Nucleotide Sequence ATGGGCACACACACAGTCAGCGTGAAGTACAAGGGCCAGCACGTGCCTGGGAGCCCCTTCCAGTTCACCGTGGGGCCCCTAGGGGAAGGGGGAGCCCACAAGGTCCGAGCTGGGGGCCCTGGCCTGGAGAGAGCTGAAGCTGGAGTGCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab