CircRNA Information

General Information
circRNA Basic Information
CircID chrX:154352311|154352630
Strand -
CircType exon
Host Gene ENSG00000196924.13;
Algorism CIRI2;
Sequence GCTGACTGTGTGTGTGCCCATCTCAGCGGGAACAAAGCGGATGCAGTAGGTGTGGTTCTCCCCTTCCACGATCTCGGCCTCATGGGTCTTGCCCGATGGGCTGGTCACCTGGGCTGTCATATCCTGGATGCTAATTTCTGCAGGGTGGGGATGGGCTAGTGAGCAGCAGCCCTGGGCTCCACCCCTCCTCTTGGGGCTGCTTGAGCCCCAGGACCCCTCCCCAGGCTTCCCACAGCCCCTACCAGGGATTTTCAGGCTGAGGTCACAATGACTACCAACGTTGGCCACTGAAGGAGCCCGACGCCTGCGGGTGATGCTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:154352311|154352630 hsa-miR-31-5p 0 0 1
chrX:154352311|154352630 hsa-miR-31-3p 0 0 1
chrX:154352311|154352630 hsa-miR-205-5p 0 0 1
chrX:154352311|154352630 hsa-miR-205-3p 0 0 1
chrX:154352311|154352630 hsa-miR-217-5p 0 0 1
chrX:154352311|154352630 hsa-miR-217-3p 0 0 1
chrX:154352311|154352630 hsa-miR-143-5p 0 0 1
chrX:154352311|154352630 hsa-miR-143-3p 0 0 1
chrX:154352311|154352630 hsa-miR-375-5p 0 0 1
chrX:154352311|154352630 hsa-miR-375-3p 0 0 1
chrX:154352311|154352630 hsa-miR-425-5p 0 0 1
chrX:154352311|154352630 hsa-miR-425-3p 0 0 1
chrX:154352311|154352630 hsa-miR-589-5p 0 0 1
chrX:154352311|154352630 hsa-miR-589-3p 0 0 1
chrX:154352311|154352630 hsa-miR-605-5p 0 0 1
chrX:154352311|154352630 hsa-miR-605-3p 0 0 1
chrX:154352311|154352630 hsa-miR-608 1 0 1
chrX:154352311|154352630 hsa-miR-616-5p 0 0 1
chrX:154352311|154352630 hsa-miR-616-3p 0 0 1
chrX:154352311|154352630 hsa-miR-661 0 0 1
chrX:154352311|154352630 hsa-miR-758-5p 0 0 1
chrX:154352311|154352630 hsa-miR-758-3p 0 0 1
chrX:154352311|154352630 hsa-miR-298 0 0 1
chrX:154352311|154352630 hsa-miR-665 0 0 1
chrX:154352311|154352630 hsa-miR-939-5p 0 0 1
chrX:154352311|154352630 hsa-miR-939-3p 0 0 1
chrX:154352311|154352630 hsa-miR-1178-5p 0 0 1
chrX:154352311|154352630 hsa-miR-1178-3p 0 0 1
chrX:154352311|154352630 hsa-miR-1228-5p 0 0 1
chrX:154352311|154352630 hsa-miR-1228-3p 0 0 1
chrX:154352311|154352630 hsa-miR-671-5p 1 0 1
chrX:154352311|154352630 hsa-miR-125a-3p 0 0 1
chrX:154352311|154352630 hsa-miR-615-5p 0 0 1
chrX:154352311|154352630 hsa-miR-324-5p 0 0 1
chrX:154352311|154352630 hsa-miR-767-3p 0 0 1
chrX:154352311|154352630 hsa-miR-509-3-5p 0 0 1
chrX:154352311|154352630 hsa-miR-509-5p 0 0 1
chrX:154352311|154352630 hsa-miR-612 1 0 0
chrX:154352311|154352630 hsa-miR-637 1 0 0
chrX:154352311|154352630 hsa-miR-638 1 0 0
chrX:154352311|154352630 hsa-miR-762 1 0 0
chrX:154352311|154352630 hsa-miR-663b 1 0 0
chrX:154352311|154352630 hsa-miR-4656 1 0 0
chrX:154352311|154352630 hsa-miR-4688 1 0 0
chrX:154352311|154352630 hsa-miR-4741 1 0 0
chrX:154352311|154352630 hsa-miR-5787 1 0 0
chrX:154352311|154352630 hsa-miR-6069 1 0 0
chrX:154352311|154352630 hsa-miR-6085 1 0 0
chrX:154352311|154352630 hsa-miR-8089 1 0 0
chrX:154352311|154352630 hsa-miR-12115 1 0 0
chrX:154352311|154352630 hsa-miR-22-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6734-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6861-5p 1 0 0
chrX:154352311|154352630 hsa-miR-3663-3p 1 0 0
chrX:154352311|154352630 hsa-miR-6089 1 0 0
chrX:154352311|154352630 hsa-miR-6741-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6742-5p 1 0 0
chrX:154352311|154352630 hsa-miR-3180-3p 1 0 0
chrX:154352311|154352630 hsa-miR-6782-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6786-5p 1 0 0
chrX:154352311|154352630 hsa-miR-1229-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6771-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6824-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6789-5p 1 0 0
chrX:154352311|154352630 hsa-miR-1289 1 0 0
chrX:154352311|154352630 hsa-miR-4750-5p 1 0 0
chrX:154352311|154352630 hsa-miR-1296-5p 1 0 0
chrX:154352311|154352630 hsa-miR-1233-5p 1 0 0
chrX:154352311|154352630 hsa-miR-4763-3p 1 0 0
chrX:154352311|154352630 hsa-miR-6787-5p 1 0 0
chrX:154352311|154352630 hsa-miR-1343-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6737-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6752-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6756-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6803-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6813-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6819-5p 1 0 0
chrX:154352311|154352630 hsa-miR-7107-5p 1 0 0
chrX:154352311|154352630 hsa-miR-7110-5p 1 0 0
chrX:154352311|154352630 hsa-miR-10401-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6722-3p 1 0 0
chrX:154352311|154352630 hsa-miR-6763-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6779-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6797-5p 1 0 0
chrX:154352311|154352630 hsa-miR-7111-5p 1 0 0
chrX:154352311|154352630 hsa-miR-4728-5p 1 0 0
chrX:154352311|154352630 hsa-miR-1237-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6738-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6846-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6848-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6858-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6885-5p 1 0 0
chrX:154352311|154352630 hsa-miR-6791-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:154352311|154352630
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MGLARWAGHLGCHILDANFCRVGMG
Nucleotide Sequence ATGGGTCTTGCCCGATGGGCTGGTCACCTGGGCTGTCATATCCTGGATGCTAATTTCTGCAGGGTGGGGATGGGCTAG
CircID chrX:154352311|154352630
ORF Type ORF2
Protein Length 60
Nucleotide Length 183
Protein Sequence MPDGLVTWAVISWMLISAGWGWASEQQPWAPPLLLGLLEPQDPSPGFPQPLPGIFRLRSQ
Nucleotide Sequence TTGCCCGATGGGCTGGTCACCTGGGCTGTCATATCCTGGATGCTAATTTCTGCAGGGTGGGGATGGGCTAGTGAGCAGCAGCCCTGGGCTCCACCCCTCCTCTTGGGGCTGCTTGAGCCCCAGGACCCCTCCCCAGGCTTCCCACAGCCCCTACCAGGGATTTTCAGGCTGAGGTCACAATGA
CircID chrX:154352311|154352630
ORF Type ORF3
Protein Length 42
Nucleotide Length 129
Protein Sequence MCVCPSQREQSGCSRCGSPLPRSRPHGSCPMGWSPGLSYPGC
Nucleotide Sequence CTGTGTGTGTGCCCATCTCAGCGGGAACAAAGCGGATGCAGTAGGTGTGGTTCTCCCCTTCCACGATCTCGGCCTCATGGGTCTTGCCCGATGGGCTGGTCACCTGGGCTGTCATATCCTGGATGCTAA
CircID chrX:154352311|154352630
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MQGGDGLVSSSPGLHPSSWGCLSPRTPPQASHSPYQGFSG
Nucleotide Sequence CTGCAGGGTGGGGATGGGCTAGTGAGCAGCAGCCCTGGGCTCCACCCCTCCTCTTGGGGCTGCTTGAGCCCCAGGACCCCTCCCCAGGCTTCCCACAGCCCCTACCAGGGATTTTCAGGCTGA
CircID chrX:154352311|154352630
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MVGAVGSLGRGPGAQAAPRGGVEPRAAAH
Nucleotide Sequence CTGGTAGGGGCTGTGGGAAGCCTGGGGAGGGGTCCTGGGGCTCAAGCAGCCCCAAGAGGAGGGGTGGAGCCCAGGGCTGCTGCTCACTAG
CircID chrX:154352311|154352630
ORF Type ORF6
Protein Length 27
Nucleotide Length 81
Protein Sequence MRPRSWKGRTTPTASALFPLRWAHTQS
Nucleotide Sequence ATGAGGCCGAGATCGTGGAAGGGGAGAACCACACCTACTGCATCCGCTTTGTTCCCGCTGAGATGGGCACACACACAGTCA
CircID chrX:154352311|154352630
ORF Type ORF7
Protein Length 34
Nucleotide Length 105
Protein Sequence MWEAWGGVLGLKQPQEEGWSPGLLLTSPSPPCRN
Nucleotide Sequence CTGTGGGAAGCCTGGGGAGGGGTCCTGGGGCTCAAGCAGCCCCAAGAGGAGGGGTGGAGCCCAGGGCTGCTGCTCACTAGCCCATCCCCACCCTGCAGAAATTAG
CircID chrX:154352311|154352630
ORF Type ORF8
Protein Length 85
Nucleotide Length 255
Protein Sequence MKIPGRGCGKPGEGSWGSSSPKRRGGAQGCCSLAHPHPAEISIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVS
Nucleotide Sequence CTGAAAATCCCTGGTAGGGGCTGTGGGAAGCCTGGGGAGGGGTCCTGGGGCTCAAGCAGCCCCAAGAGGAGGGGTGGAGCCCAGGGCTGCTGCTCACTAGCCCATCCCCACCCTGCAGAAATTAGCATCCAGGATATGACAGCCCAGGTGACCAGCCCATCGGGCAAGACCCATGAGGCCGAGATCGTGGAAGGGGAGAACCACACCTACTGCATCCGCTTTGTTCCCGCTGAGATGGGCACACACACAGTCAGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab