CircRNA Information

General Information
circRNA Basic Information
CircID chrX:154364942|154365421
Strand -
CircType exon
Host Gene ENSG00000196924.13;
Algorism CIRI2;
Sequence CTTCACTTCGAAGGGACTGCGCCCGATGTTCTGACCACCCCACGTGATGGTGACGATATAGGTTCCAGGGACCATGGGGTAATACTCGAAGCCATACACGCCATCCCCCAGGTCCTTCTGCTTCACGCGCTCCTCTCCCTCTGCCAAGACAAGGAGGGCCTCAGGCCTGCCCAGCAGTGAACCCGGGGGCTGCCGCCACCCATCCTGGCCTGGCTCCAGGCCAACTTACTGGGGCCCTTCACGGTGACCTTCAGCTCCCCACTGCCAGCGCCCTTTGTGTACACCTTGAAGTCAGCTGTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:154364942|154365421 hsa-miR-34a-5p 0 0 1
chrX:154364942|154365421 hsa-miR-34a-3p 0 0 1
chrX:154364942|154365421 hsa-miR-382-5p 0 0 1
chrX:154364942|154365421 hsa-miR-382-3p 0 0 1
chrX:154364942|154365421 hsa-miR-135b-5p 0 0 1
chrX:154364942|154365421 hsa-miR-135b-3p 0 0 1
chrX:154364942|154365421 hsa-miR-449a 0 0 1
chrX:154364942|154365421 hsa-miR-431-5p 0 0 1
chrX:154364942|154365421 hsa-miR-431-3p 0 0 1
chrX:154364942|154365421 hsa-miR-511-5p 0 0 1
chrX:154364942|154365421 hsa-miR-511-3p 0 0 1
chrX:154364942|154365421 hsa-miR-492 0 1 1
chrX:154364942|154365421 hsa-miR-493-5p 0 0 1
chrX:154364942|154365421 hsa-miR-493-3p 0 0 1
chrX:154364942|154365421 hsa-miR-496 0 1 1
chrX:154364942|154365421 hsa-miR-608 1 1 1
chrX:154364942|154365421 hsa-miR-612 0 1 1
chrX:154364942|154365421 hsa-miR-617 0 0 1
chrX:154364942|154365421 hsa-miR-625-5p 0 0 1
chrX:154364942|154365421 hsa-miR-625-3p 0 0 1
chrX:154364942|154365421 hsa-miR-631 0 0 1
chrX:154364942|154365421 hsa-miR-637 0 1 1
chrX:154364942|154365421 hsa-miR-449b-5p 0 0 1
chrX:154364942|154365421 hsa-miR-449b-3p 0 0 1
chrX:154364942|154365421 hsa-miR-298 0 0 1
chrX:154364942|154365421 hsa-miR-920 0 0 1
chrX:154364942|154365421 hsa-miR-939-5p 0 0 1
chrX:154364942|154365421 hsa-miR-939-3p 0 0 1
chrX:154364942|154365421 hsa-miR-1293 1 1 1
chrX:154364942|154365421 hsa-miR-1275 0 0 1
chrX:154364942|154365421 hsa-miR-296-5p 0 0 1
chrX:154364942|154365421 hsa-miR-491-5p 0 0 1
chrX:154364942|154365421 hsa-miR-342-5p 0 0 1
chrX:154364942|154365421 hsa-miR-34c-5p 0 1 1
chrX:154364942|154365421 hsa-miR-556-3p 0 0 1
chrX:154364942|154365421 hsa-miR-323-5p 0 0 1
chrX:154364942|154365421 hsa-miR-1285 0 0 1
chrX:154364942|154365421 hsa-miR-135a 0 0 1
chrX:154364942|154365421 hsa-miR-1254 0 0 1
chrX:154364942|154365421 hsa-miR-638 1 0 0
chrX:154364942|154365421 hsa-miR-648 1 0 0
chrX:154364942|154365421 hsa-miR-658 1 0 0
chrX:154364942|154365421 hsa-miR-760 1 0 0
chrX:154364942|154365421 hsa-miR-1268a 1 0 0
chrX:154364942|154365421 hsa-miR-2861 1 1 0
chrX:154364942|154365421 hsa-miR-3132 1 0 0
chrX:154364942|154365421 hsa-miR-544b 0 1 0
chrX:154364942|154365421 hsa-miR-3141 1 0 0
chrX:154364942|154365421 hsa-miR-4300 0 1 0
chrX:154364942|154365421 hsa-miR-4308 0 1 0
chrX:154364942|154365421 hsa-miR-4254 0 1 0
chrX:154364942|154365421 hsa-miR-4290 0 1 0
chrX:154364942|154365421 hsa-miR-3943 0 1 0
chrX:154364942|154365421 hsa-miR-1268b 1 0 0
chrX:154364942|154365421 hsa-miR-4455 1 0 0
chrX:154364942|154365421 hsa-miR-4466 1 0 0
chrX:154364942|154365421 hsa-miR-4467 1 0 0
chrX:154364942|154365421 hsa-miR-4487 1 0 0
chrX:154364942|154365421 hsa-miR-4498 1 0 0
chrX:154364942|154365421 hsa-miR-2392 0 1 0
chrX:154364942|154365421 hsa-miR-4510 0 1 0
chrX:154364942|154365421 hsa-miR-4525 1 1 0
chrX:154364942|154365421 hsa-miR-3974 0 1 0
chrX:154364942|154365421 hsa-miR-4651 1 1 0
chrX:154364942|154365421 hsa-miR-4656 1 0 0
chrX:154364942|154365421 hsa-miR-4688 1 0 0
chrX:154364942|154365421 hsa-miR-4706 1 0 0
chrX:154364942|154365421 hsa-miR-4739 1 1 0
chrX:154364942|154365421 hsa-miR-4767 1 0 0
chrX:154364942|154365421 hsa-miR-5698 1 0 0
chrX:154364942|154365421 hsa-miR-5787 1 0 0
chrX:154364942|154365421 hsa-miR-6085 1 0 0
chrX:154364942|154365421 hsa-miR-6090 1 0 0
chrX:154364942|154365421 hsa-miR-6127 1 1 0
chrX:154364942|154365421 hsa-miR-6129 0 1 0
chrX:154364942|154365421 hsa-miR-6130 0 1 0
chrX:154364942|154365421 hsa-miR-6745 1 0 0
chrX:154364942|154365421 hsa-miR-6860 0 1 0
chrX:154364942|154365421 hsa-miR-7150 1 1 0
chrX:154364942|154365421 hsa-miR-8072 1 0 0
chrX:154364942|154365421 hsa-miR-8073 1 0 0
chrX:154364942|154365421 hsa-miR-8085 1 1 0
chrX:154364942|154365421 hsa-miR-9899 1 0 0
chrX:154364942|154365421 hsa-miR-150-3p 1 0 0
chrX:154364942|154365421 hsa-miR-432-3p 1 0 0
chrX:154364942|154365421 hsa-miR-6734-5p 1 0 0
chrX:154364942|154365421 hsa-miR-323a-5p 1 1 0
chrX:154364942|154365421 hsa-miR-6747-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6765-5p 1 0 0
chrX:154364942|154365421 hsa-miR-3150a-3p 1 1 0
chrX:154364942|154365421 hsa-miR-6861-5p 0 1 0
chrX:154364942|154365421 hsa-miR-7106-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6825-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6894-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6857-5p 1 0 0
chrX:154364942|154365421 hsa-miR-1972 0 1 0
chrX:154364942|154365421 hsa-miR-6799-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6510-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6728-5p 1 0 0
chrX:154364942|154365421 hsa-miR-3692-5p 0 1 0
chrX:154364942|154365421 hsa-miR-7851-3p 0 1 0
chrX:154364942|154365421 hsa-miR-6089 1 0 0
chrX:154364942|154365421 hsa-miR-4653-3p 1 0 0
chrX:154364942|154365421 hsa-miR-505-5p 0 1 0
chrX:154364942|154365421 hsa-miR-4755-3p 0 1 0
chrX:154364942|154365421 hsa-miR-6820-5p 0 1 0
chrX:154364942|154365421 hsa-miR-6741-5p 1 0 0
chrX:154364942|154365421 hsa-miR-197-5p 1 0 0
chrX:154364942|154365421 hsa-miR-8069 1 0 0
chrX:154364942|154365421 hsa-miR-432-5p 0 1 0
chrX:154364942|154365421 hsa-miR-6742-5p 0 1 0
chrX:154364942|154365421 hsa-miR-6772-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6796-5p 1 0 0
chrX:154364942|154365421 hsa-miR-185-3p 1 0 0
chrX:154364942|154365421 hsa-miR-6732-5p 1 0 0
chrX:154364942|154365421 hsa-miR-2467-5p 0 1 0
chrX:154364942|154365421 hsa-miR-6827-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6798-5p 1 1 0
chrX:154364942|154365421 hsa-miR-6760-5p 0 1 0
chrX:154364942|154365421 hsa-miR-2467-3p 1 1 0
chrX:154364942|154365421 hsa-miR-6782-5p 1 0 0
chrX:154364942|154365421 hsa-miR-5006-5p 0 1 0
chrX:154364942|154365421 hsa-miR-6786-5p 1 0 0
chrX:154364942|154365421 hsa-miR-885-3p 1 0 0
chrX:154364942|154365421 hsa-miR-92b-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6749-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6847-5p 1 0 0
chrX:154364942|154365421 hsa-miR-4787-5p 1 0 0
chrX:154364942|154365421 hsa-miR-4667-3p 0 1 0
chrX:154364942|154365421 hsa-miR-149-3p 1 0 0
chrX:154364942|154365421 hsa-miR-6789-5p 1 0 0
chrX:154364942|154365421 hsa-miR-4715-5p 0 1 0
chrX:154364942|154365421 hsa-miR-194-3p 0 1 0
chrX:154364942|154365421 hsa-miR-5010-5p 1 1 0
chrX:154364942|154365421 hsa-miR-6864-5p 0 1 0
chrX:154364942|154365421 hsa-miR-7160-3p 1 0 0
chrX:154364942|154365421 hsa-miR-4707-5p 1 0 0
chrX:154364942|154365421 hsa-miR-1250-5p 1 0 0
chrX:154364942|154365421 hsa-miR-2114-5p 0 1 0
chrX:154364942|154365421 hsa-miR-4727-3p 0 1 0
chrX:154364942|154365421 hsa-miR-6801-5p 0 1 0
chrX:154364942|154365421 hsa-miR-4750-5p 0 1 0
chrX:154364942|154365421 hsa-miR-4761-5p 0 1 0
chrX:154364942|154365421 hsa-miR-6770-3p 0 1 0
chrX:154364942|154365421 hsa-miR-4649-3p 0 1 0
chrX:154364942|154365421 hsa-miR-2277-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6816-3p 0 1 0
chrX:154364942|154365421 hsa-miR-3177-5p 1 1 0
chrX:154364942|154365421 hsa-miR-135a-5p 0 1 0
chrX:154364942|154365421 hsa-miR-589-3p 0 1 0
chrX:154364942|154365421 hsa-miR-10400-5p 1 0 0
chrX:154364942|154365421 hsa-miR-1207-5p 1 0 0
chrX:154364942|154365421 hsa-miR-1233-5p 1 0 0
chrX:154364942|154365421 hsa-miR-4763-3p 1 0 0
chrX:154364942|154365421 hsa-miR-6812-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6870-5p 1 1 0
chrX:154364942|154365421 hsa-miR-1343-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6726-5p 1 1 0
chrX:154364942|154365421 hsa-miR-6737-5p 1 1 0
chrX:154364942|154365421 hsa-miR-6752-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6756-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6769a-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6803-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6813-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6819-5p 1 1 0
chrX:154364942|154365421 hsa-miR-6842-5p 1 0 0
chrX:154364942|154365421 hsa-miR-1249-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6751-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6779-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6788-5p 0 1 0
chrX:154364942|154365421 hsa-miR-6797-5p 1 1 0
chrX:154364942|154365421 hsa-miR-6808-5p 1 0 0
chrX:154364942|154365421 hsa-miR-7111-5p 1 0 0
chrX:154364942|154365421 hsa-miR-3620-5p 1 0 0
chrX:154364942|154365421 hsa-miR-4728-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6780b-5p 1 0 0
chrX:154364942|154365421 hsa-miR-10526-3p 1 0 0
chrX:154364942|154365421 hsa-miR-1237-5p 1 0 0
chrX:154364942|154365421 hsa-miR-328-5p 1 0 0
chrX:154364942|154365421 hsa-miR-4649-5p 1 0 0
chrX:154364942|154365421 hsa-miR-4725-3p 1 0 0
chrX:154364942|154365421 hsa-miR-4745-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6729-5p 1 0 0
chrX:154364942|154365421 hsa-miR-675-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6794-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6846-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6848-5p 1 0 0
chrX:154364942|154365421 hsa-miR-3187-5p 1 1 0
chrX:154364942|154365421 hsa-miR-6831-5p 1 0 0
chrX:154364942|154365421 hsa-miR-10394-3p 1 0 0
chrX:154364942|154365421 hsa-miR-6511b-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6731-5p 0 1 0
chrX:154364942|154365421 hsa-miR-6856-5p 1 0 0
chrX:154364942|154365421 hsa-miR-4665-5p 1 1 0
chrX:154364942|154365421 hsa-miR-6855-5p 1 0 0
chrX:154364942|154365421 hsa-miR-3116 0 1 0
chrX:154364942|154365421 hsa-miR-6766-5p 1 0 0
chrX:154364942|154365421 hsa-miR-6785-5p 1 0 0
chrX:154364942|154365421 hsa-miR-4667-5p 1 1 0
chrX:154364942|154365421 hsa-miR-6791-5p 1 1 0
chrX:154364942|154365421 hsa-miR-6762-5p 1 0 0
chrX:154364942|154365421 hsa-miR-9851-5p 1 1 0
chrX:154364942|154365421 hsa-miR-6718-5p 1 0 0
chrX:154364942|154365421 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chrX:154364942|154365421
ORF Type ORF1
Protein Length 49
Nucleotide Length 150
Protein Sequence MTTPRDGDDIGSRDHGVILEAIHAIPQVLLLHALLSLCQDKEGLRPAQQ
Nucleotide Sequence CTGACCACCCCACGTGATGGTGACGATATAGGTTCCAGGGACCATGGGGTAATACTCGAAGCCATACACGCCATCCCCCAGGTCCTTCTGCTTCACGCGCTCCTCTCCCTCTGCCAAGACAAGGAGGGCCTCAGGCCTGCCCAGCAGTGA
CircID chrX:154364942|154365421
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MPPPILAWLQANLLGPFTVTFSSPLPAPFVYTLKSAV
Nucleotide Sequence CTGCCGCCACCCATCCTGGCCTGGCTCCAGGCCAACTTACTGGGGCCCTTCACGGTGACCTTCAGCTCCCCACTGCCAGCGCCCTTTGTGTACACCTTGAAGTCAGCTGTC
CircID chrX:154364942|154365421
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MPSSEPGGCRHPSWPGSRPTYWGPSR
Nucleotide Sequence CTGCCCAGCAGTGAACCCGGGGGCTGCCGCCACCCATCCTGGCCTGGCTCCAGGCCAACTTACTGGGGCCCTTCACGGTGA
CircID chrX:154364942|154365421
ORF Type ORF4
Protein Length 54
Nucleotide Length 162
Protein Sequence MPRQGGPQACPAVNPGAAATHPGLAPGQLTGALHGDLQLPTASALCVHLEVSCL
Nucleotide Sequence CTGCCAAGACAAGGAGGGCCTCAGGCCTGCCCAGCAGTGAACCCGGGGGCTGCCGCCACCCATCCTGGCCTGGCTCCAGGCCAACTTACTGGGGCCCTTCACGGTGACCTTCAGCTCCCCACTGCCAGCGCCCTTTGTGTACACCTTGAAGTCAGCTGTCTC
CircID chrX:154364942|154365421
ORF Type ORF5
Protein Length 43
Nucleotide Length 132
Protein Sequence MKVTVKGPSKLAWSQARMGGGSPRVHCWAGLRPSLSWQRERSA
Nucleotide Sequence CTGAAGGTCACCGTGAAGGGCCCCAGTAAGTTGGCCTGGAGCCAGGCCAGGATGGGTGGCGGCAGCCCCCGGGTTCACTGCTGGGCAGGCCTGAGGCCCTCCTTGTCTTGGCAGAGGGAGAGGAGCGCGTGA
CircID chrX:154364942|154365421
ORF Type ORF6
Protein Length 33
Nucleotide Length 102
Protein Sequence MACMASSITPWSLEPISSPSRGVVRTSGAVPSK
Nucleotide Sequence ATGGCGTGTATGGCTTCGAGTATTACCCCATGGTCCCTGGAACCTATATCGTCACCATCACGTGGGGTGGTCAGAACATCGGGCGCAGTCCCTTCGAAGTGA
CircID chrX:154364942|154365421
ORF Type ORF7
Protein Length 73
Nucleotide Length 219
Protein Sequence MEPGQDGWRQPPGSLLGRPEALLVLAEGEERVKQKDLGDGVYGFEYYPMVPGTYIVTITWGGQNIGRSPFEVK
Nucleotide Sequence CTGGAGCCAGGCCAGGATGGGTGGCGGCAGCCCCCGGGTTCACTGCTGGGCAGGCCTGAGGCCCTCCTTGTCTTGGCAGAGGGAGAGGAGCGCGTGAAGCAGAAGGACCTGGGGGATGGCGTGTATGGCTTCGAGTATTACCCCATGGTCCCTGGAACCTATATCGTCACCATCACGTGGGGTGGTCAGAACATCGGGCGCAGTCCCTTCGAAGTGAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab