CircRNA Information

General Information
circRNA Basic Information
CircID chrX:154444572|154444736
Strand -
CircType exon
Host Gene ENSG00000071859.13;
Algorism CIRI2;
Sequence TAGCTGATGACCGGCCTCCGGCAGGAGGGAGCCGAGCCAGTGTTTCTGTTGGGAGGCACGGCGGGGACGGGCCTCTCGTCGCCTCGCCTGGGCACCCAGCGTCCTGGCTCTGGCCCCTCGGCCCTCAGAGCCAGGCCTCTGCCCCCTCGGCCCTCAGAGCCAGGC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:154444572|154444736 hsa-miR-141-5p 0 0 1
chrX:154444572|154444736 hsa-miR-141-3p 0 0 1
chrX:154444572|154444736 hsa-miR-149-5p 0 0 1
chrX:154444572|154444736 hsa-miR-149-3p 0 0 1
chrX:154444572|154444736 hsa-miR-150-5p 0 0 1
chrX:154444572|154444736 hsa-miR-150-3p 0 0 1
chrX:154444572|154444736 hsa-miR-200a-5p 0 0 1
chrX:154444572|154444736 hsa-miR-200a-3p 0 0 1
chrX:154444572|154444736 hsa-miR-892b 0 1 1
chrX:154444572|154444736 hsa-miR-760 1 1 1
chrX:154444572|154444736 hsa-miR-1247-5p 0 0 1
chrX:154444572|154444736 hsa-miR-1247-3p 0 0 1
chrX:154444572|154444736 hsa-miR-486-3p 0 0 1
chrX:154444572|154444736 hsa-miR-423-5p 0 1 1
chrX:154444572|154444736 hsa-miR-637 1 0 0
chrX:154444572|154444736 hsa-miR-663a 1 1 0
chrX:154444572|154444736 hsa-miR-762 1 0 0
chrX:154444572|154444736 hsa-miR-1203 0 1 0
chrX:154444572|154444736 hsa-miR-1538 1 0 0
chrX:154444572|154444736 hsa-miR-2861 1 0 0
chrX:154444572|154444736 hsa-miR-3196 1 0 0
chrX:154444572|154444736 hsa-miR-1268b 1 0 0
chrX:154444572|154444736 hsa-miR-4656 1 1 0
chrX:154444572|154444736 hsa-miR-4734 1 0 0
chrX:154444572|154444736 hsa-miR-5090 1 0 0
chrX:154444572|154444736 hsa-miR-5691 0 1 0
chrX:154444572|154444736 hsa-miR-8057 0 1 0
chrX:154444572|154444736 hsa-miR-8089 1 0 0
chrX:154444572|154444736 hsa-miR-12119 1 1 0
chrX:154444572|154444736 hsa-miR-4747-3p 0 1 0
chrX:154444572|154444736 hsa-miR-6089 1 0 0
chrX:154444572|154444736 hsa-miR-4755-3p 0 1 0
chrX:154444572|154444736 hsa-miR-6741-5p 1 1 0
chrX:154444572|154444736 hsa-miR-197-5p 1 0 0
chrX:154444572|154444736 hsa-miR-5589-5p 0 1 0
chrX:154444572|154444736 hsa-miR-6776-5p 0 1 0
chrX:154444572|154444736 hsa-miR-3180-3p 1 0 0
chrX:154444572|154444736 hsa-miR-6732-5p 1 0 0
chrX:154444572|154444736 hsa-miR-6805-5p 1 0 0
chrX:154444572|154444736 hsa-miR-1226-5p 1 1 0
chrX:154444572|154444736 hsa-miR-4640-5p 0 1 0
chrX:154444572|154444736 hsa-miR-6757-3p 0 1 0
chrX:154444572|154444736 hsa-miR-1908-5p 1 0 0
chrX:154444572|154444736 hsa-miR-6749-5p 1 0 0
chrX:154444572|154444736 hsa-miR-6781-5p 0 1 0
chrX:154444572|154444736 hsa-miR-6877-5p 1 1 0
chrX:154444572|154444736 hsa-miR-10400-5p 1 0 0
chrX:154444572|154444736 hsa-miR-1207-5p 1 0 0
chrX:154444572|154444736 hsa-miR-1233-5p 1 0 0
chrX:154444572|154444736 hsa-miR-4763-3p 1 1 0
chrX:154444572|154444736 hsa-miR-6743-5p 1 0 0
chrX:154444572|154444736 hsa-miR-6722-3p 1 0 0
chrX:154444572|154444736 hsa-miR-10396b-5p 1 0 0
chrX:154444572|154444736 hsa-miR-1237-5p 1 0 0
chrX:154444572|154444736 hsa-miR-1909-3p 0 1 0
chrX:154444572|154444736 hsa-miR-328-5p 1 1 0
chrX:154444572|154444736 hsa-miR-4649-5p 1 0 0
chrX:154444572|154444736 hsa-miR-4726-5p 0 1 0
chrX:154444572|154444736 hsa-miR-6729-5p 1 0 0
chrX:154444572|154444736 hsa-miR-6735-5p 1 0 0
chrX:154444572|154444736 hsa-miR-6738-5p 1 0 0
chrX:154444572|154444736 hsa-miR-6795-5p 1 0 0
chrX:154444572|154444736 hsa-miR-6846-5p 1 0 0
chrX:154444572|154444736 hsa-miR-6848-5p 1 0 0
chrX:154444572|154444736 hsa-miR-6845-5p 0 1 0
chrX:154444572|154444736 hsa-miR-3184-5p 0 1 0
chrX:154444572|154444736 hsa-miR-10398-5p 0 1 0
chrX:154444572|154444736 hsa-miR-6791-5p 1 0 0
chrX:154444572|154444736 hsa-miR-6762-5p 0 1 0
chrX:154444572|154444736 hsa-miR-10401-3p 0 1 0
chrX:154444572|154444736 hsa-miR-5581-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:154444572|154444736
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence MMTGLRQEGAEPVFLLGGTAGTGLSSPRLGTQRPGSGPSALRARPLPPRPSEPG
Nucleotide Sequence CTGATGACCGGCCTCCGGCAGGAGGGAGCCGAGCCAGTGTTTCTGTTGGGAGGCACGGCGGGGACGGGCCTCTCGTCGCCTCGCCTGGGCACCCAGCGTCCTGGCTCTGGCCCCTCGGCCCTCAGAGCCAGGCCTCTGCCCCCTCGGCCCTCAGAGCCAGGC
CircID chrX:154444572|154444736
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MGAQARRREARPRRASQQKHWLGSLLPEAGHQL
Nucleotide Sequence CTGGGTGCCCAGGCGAGGCGACGAGAGGCCCGTCCCCGCCGTGCCTCCCAACAGAAACACTGGCTCGGCTCCCTCCTGCCGGAGGCCGGTCATCAGCTA
CircID chrX:154444572|154444736
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MALRAEGPEPGRWVPRRGDERPVPAVPPNRNTGSAPSCRRPVIS
Nucleotide Sequence CTGGCTCTGAGGGCCGAGGGGCCAGAGCCAGGACGCTGGGTGCCCAGGCGAGGCGACGAGAGGCCCGTCCCCGCCGTGCCTCCCAACAGAAACACTGGCTCGGCTCCCTCCTGCCGGAGGCCGGTCATCAGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab