CircRNA Information

General Information
circRNA Basic Information
CircID chrX:154446518|154448560
Strand +
CircType exon
Host Gene ENSG00000071859.13;
Algorism CIRI2;
Sequence CTCACGGTCTCGATCAGGCAAGAAGCTTGTGTCAACGTCTGGGTTCTTCCCCAGTTTTCTCTTCTTCGTGGTGATCTCTTCCCTTTCCATCTCCTCCTCATACATGGCCGCCTCCTCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:154446518|154448560 hsa-miR-197-5p 0 0 1
chrX:154446518|154448560 hsa-miR-197-3p 0 0 1
chrX:154446518|154448560 hsa-miR-765 1 1 1
chrX:154446518|154448560 hsa-miR-548e-5p 0 0 1
chrX:154446518|154448560 hsa-miR-548e-3p 0 0 1
chrX:154446518|154448560 hsa-miR-369-5p 0 0 1
chrX:154446518|154448560 hsa-miR-548a-3p 0 0 1
chrX:154446518|154448560 hsa-miR-548b-3p 0 0 1
chrX:154446518|154448560 hsa-miR-220b 0 0 1
chrX:154446518|154448560 hsa-miR-548f 0 0 1
chrX:154446518|154448560 hsa-miR-514 0 0 1
chrX:154446518|154448560 hsa-miR-1201 0 0 1
chrX:154446518|154448560 hsa-miR-571 1 0 0
chrX:154446518|154448560 hsa-miR-3125 0 1 0
chrX:154446518|154448560 hsa-miR-3132 1 0 0
chrX:154446518|154448560 hsa-miR-3154 1 0 0
chrX:154446518|154448560 hsa-miR-3175 1 1 0
chrX:154446518|154448560 hsa-miR-3178 1 0 0
chrX:154446518|154448560 hsa-miR-3196 1 0 0
chrX:154446518|154448560 hsa-miR-3197 1 0 0
chrX:154446518|154448560 hsa-miR-4271 1 1 0
chrX:154446518|154448560 hsa-miR-3915 1 0 0
chrX:154446518|154448560 hsa-miR-3916 1 0 0
chrX:154446518|154448560 hsa-miR-3937 1 0 0
chrX:154446518|154448560 hsa-miR-4441 1 0 0
chrX:154446518|154448560 hsa-miR-4467 1 0 0
chrX:154446518|154448560 hsa-miR-4479 1 0 0
chrX:154446518|154448560 hsa-miR-4488 1 0 0
chrX:154446518|154448560 hsa-miR-4516 1 0 0
chrX:154446518|154448560 hsa-miR-4533 1 0 0
chrX:154446518|154448560 hsa-miR-4534 1 0 0
chrX:154446518|154448560 hsa-miR-3960 1 0 0
chrX:154446518|154448560 hsa-miR-4689 1 1 0
chrX:154446518|154448560 hsa-miR-4739 1 0 0
chrX:154446518|154448560 hsa-miR-4784 1 1 0
chrX:154446518|154448560 hsa-miR-5194 1 0 0
chrX:154446518|154448560 hsa-miR-5739 1 0 0
chrX:154446518|154448560 hsa-miR-6124 1 0 0
chrX:154446518|154448560 hsa-miR-6165 1 0 0
chrX:154446518|154448560 hsa-miR-7150 1 0 0
chrX:154446518|154448560 hsa-miR-7515 0 1 0
chrX:154446518|154448560 hsa-miR-8085 1 0 0
chrX:154446518|154448560 hsa-miR-9500 1 1 0
chrX:154446518|154448560 hsa-miR-12114 1 0 0
chrX:154446518|154448560 hsa-miR-12118 1 0 0
chrX:154446518|154448560 hsa-miR-4433b-3p 1 0 0
chrX:154446518|154448560 hsa-miR-6734-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6765-5p 1 0 0
chrX:154446518|154448560 hsa-miR-3150a-3p 1 0 0
chrX:154446518|154448560 hsa-miR-7106-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6825-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6894-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6510-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6728-5p 1 0 0
chrX:154446518|154448560 hsa-miR-766-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6757-5p 1 0 0
chrX:154446518|154448560 hsa-miR-7847-3p 1 0 0
chrX:154446518|154448560 hsa-miR-4695-5p 1 0 0
chrX:154446518|154448560 hsa-miR-4709-3p 1 1 0
chrX:154446518|154448560 hsa-miR-6730-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6716-5p 1 0 0
chrX:154446518|154448560 hsa-miR-1292-5p 1 0 0
chrX:154446518|154448560 hsa-miR-3180-3p 1 0 0
chrX:154446518|154448560 hsa-miR-6805-5p 1 1 0
chrX:154446518|154448560 hsa-miR-1224-5p 1 0 0
chrX:154446518|154448560 hsa-miR-3150b-3p 1 0 0
chrX:154446518|154448560 hsa-miR-1229-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6771-5p 1 0 0
chrX:154446518|154448560 hsa-miR-877-5p 1 0 0
chrX:154446518|154448560 hsa-miR-3202 1 0 0
chrX:154446518|154448560 hsa-miR-7854-3p 1 0 0
chrX:154446518|154448560 hsa-miR-6717-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6824-5p 1 0 0
chrX:154446518|154448560 hsa-miR-5584-5p 1 1 0
chrX:154446518|154448560 hsa-miR-10400-5p 1 0 0
chrX:154446518|154448560 hsa-miR-1207-5p 1 0 0
chrX:154446518|154448560 hsa-miR-4763-3p 1 0 0
chrX:154446518|154448560 hsa-miR-6778-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6865-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6870-5p 1 0 0
chrX:154446518|154448560 hsa-miR-1343-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6815-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6819-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6851-5p 1 0 0
chrX:154446518|154448560 hsa-miR-11181-3p 1 1 0
chrX:154446518|154448560 hsa-miR-6763-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6797-5p 1 0 0
chrX:154446518|154448560 hsa-miR-7111-5p 1 0 0
chrX:154446518|154448560 hsa-miR-5196-5p 1 1 0
chrX:154446518|154448560 hsa-miR-6780b-5p 1 0 0
chrX:154446518|154448560 hsa-miR-10526-3p 1 0 0
chrX:154446518|154448560 hsa-miR-1237-5p 1 0 0
chrX:154446518|154448560 hsa-miR-4725-3p 1 1 0
chrX:154446518|154448560 hsa-miR-6735-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6738-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6794-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6846-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6848-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6858-5p 1 1 0
chrX:154446518|154448560 hsa-miR-4723-5p 1 0 0
chrX:154446518|154448560 hsa-miR-939-5p 1 0 0
chrX:154446518|154448560 hsa-miR-4758-5p 1 0 0
chrX:154446518|154448560 hsa-miR-4700-5p 0 1 0
chrX:154446518|154448560 hsa-miR-3679-5p 1 1 0
chrX:154446518|154448560 hsa-miR-4646-5p 1 0 0
chrX:154446518|154448560 hsa-miR-4716-3p 1 0 0
chrX:154446518|154448560 hsa-miR-6750-5p 1 0 0
chrX:154446518|154448560 hsa-miR-4667-5p 1 0 0
chrX:154446518|154448560 hsa-miR-6529-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chrX:154446518|154448560
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MYEEEMEREEITTKKRKLGKNPDVDTSFLPDRDRE
Nucleotide Sequence ATGTATGAGGAGGAGATGGAAAGGGAAGAGATCACCACGAAGAAGAGAAAACTGGGGAAGAACCCAGACGTTGACACAAGCTTCTTGCCTGATCGAGACCGTGAG
CircID chrX:154446518|154448560
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MRRRWKGKRSPRRRENWGRTQTLTQASCLIETV
Nucleotide Sequence ATGAGGAGGAGATGGAAAGGGAAGAGATCACCACGAAGAAGAGAAAACTGGGGAAGAACCCAGACGTTGACACAAGCTTCTTGCCTGATCGAGACCGTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab