CircRNA Information

General Information
circRNA Basic Information
CircID chrX:154465488|154465847
Strand +
CircType exon
Host Gene ENSG00000130827.6;
Algorism CIRI2;
Sequence CTGCGTGATGCGGGGGTGGCTGCACCGGGTGCCCTTCTGGCTCAGGTGCATCCAGTTGGTCTTCGGGGCCGGGCAGTGGGTCCGCAGCTGGCACCTGTGCTCTGAGATGCACCAGCCACAGTTGAAGCGGGGATCAGCCTTGAGGCAGAGGCCACAGCTGGGCCGCTGCGCCCAGCACTTGTACAGGAGGGCTGCAGGCACAGAAGGCACTGCTGACGGAGCAGGCAGTGGCAGAAAAGTGGAAAGTGGGGAGCACTAGGGCCCCCAGACCCGACCCCAGCAGTGCCAATTGCCTTAGGAGGGAAGCTCCCTGGCCCATGCCTTCACCTCGGAAGCTGGGAGGCTTGTCTATGGGGAAGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:154465488|154465847 hsa-miR-96-5p 0 0 1
chrX:154465488|154465847 hsa-miR-96-3p 0 0 1
chrX:154465488|154465847 hsa-miR-214-5p 0 0 1
chrX:154465488|154465847 hsa-miR-214-3p 0 0 1
chrX:154465488|154465847 hsa-miR-302a-5p 0 0 1
chrX:154465488|154465847 hsa-miR-302a-3p 0 0 1
chrX:154465488|154465847 hsa-miR-302b-5p 0 0 1
chrX:154465488|154465847 hsa-miR-302b-3p 0 0 1
chrX:154465488|154465847 hsa-miR-302c-5p 0 0 1
chrX:154465488|154465847 hsa-miR-302c-3p 0 0 1
chrX:154465488|154465847 hsa-miR-302d-5p 0 0 1
chrX:154465488|154465847 hsa-miR-302d-3p 0 0 1
chrX:154465488|154465847 hsa-miR-372-5p 0 0 1
chrX:154465488|154465847 hsa-miR-372-3p 0 0 1
chrX:154465488|154465847 hsa-miR-373-5p 0 0 1
chrX:154465488|154465847 hsa-miR-373-3p 0 0 1
chrX:154465488|154465847 hsa-miR-520e-5p 0 0 1
chrX:154465488|154465847 hsa-miR-520e-3p 0 0 1
chrX:154465488|154465847 hsa-miR-519e-5p 0 0 1
chrX:154465488|154465847 hsa-miR-519e-3p 0 0 1
chrX:154465488|154465847 hsa-miR-520f-5p 0 0 1
chrX:154465488|154465847 hsa-miR-520f-3p 0 0 1
chrX:154465488|154465847 hsa-miR-520b-5p 0 0 1
chrX:154465488|154465847 hsa-miR-520b-3p 0 0 1
chrX:154465488|154465847 hsa-miR-506-5p 0 0 1
chrX:154465488|154465847 hsa-miR-506-3p 0 0 1
chrX:154465488|154465847 hsa-miR-552-5p 0 0 1
chrX:154465488|154465847 hsa-miR-552-3p 0 0 1
chrX:154465488|154465847 hsa-miR-637 1 1 1
chrX:154465488|154465847 hsa-miR-1271-5p 0 0 1
chrX:154465488|154465847 hsa-miR-1271-3p 0 0 1
chrX:154465488|154465847 hsa-miR-920 0 0 1
chrX:154465488|154465847 hsa-miR-922 0 0 1
chrX:154465488|154465847 hsa-miR-1237-5p 0 0 1
chrX:154465488|154465847 hsa-miR-1237-3p 0 0 1
chrX:154465488|154465847 hsa-miR-1202 0 1 1
chrX:154465488|154465847 hsa-miR-663b 0 1 1
chrX:154465488|154465847 hsa-miR-1243 0 0 1
chrX:154465488|154465847 hsa-miR-302e 0 0 1
chrX:154465488|154465847 hsa-miR-486-5p 0 1 1
chrX:154465488|154465847 hsa-miR-512-3p 0 0 1
chrX:154465488|154465847 hsa-miR-615-5p 1 0 1
chrX:154465488|154465847 hsa-miR-1184 0 0 1
chrX:154465488|154465847 hsa-miR-515-3p 0 1 1
chrX:154465488|154465847 hsa-miR-520d-3p 0 0 1
chrX:154465488|154465847 hsa-miR-502-3p 0 1 1
chrX:154465488|154465847 hsa-miR-501-3p 0 1 1
chrX:154465488|154465847 hsa-miR-520a-3p 0 0 1
chrX:154465488|154465847 hsa-miR-520c-3p 0 0 1
chrX:154465488|154465847 hsa-miR-886-5p 0 0 1
chrX:154465488|154465847 hsa-miR-550 0 0 1
chrX:154465488|154465847 hsa-miR-642 0 0 1
chrX:154465488|154465847 hsa-miR-138 0 0 1
chrX:154465488|154465847 hsa-miR-124 0 0 1
chrX:154465488|154465847 hsa-miR-544 0 0 1
chrX:154465488|154465847 hsa-miR-636 1 0 0
chrX:154465488|154465847 hsa-miR-764 0 1 0
chrX:154465488|154465847 hsa-miR-1248 0 1 0
chrX:154465488|154465847 hsa-miR-3137 1 0 0
chrX:154465488|154465847 hsa-miR-3154 0 1 0
chrX:154465488|154465847 hsa-miR-3907 1 0 0
chrX:154465488|154465847 hsa-miR-4473 0 1 0
chrX:154465488|154465847 hsa-miR-4486 0 1 0
chrX:154465488|154465847 hsa-miR-4734 1 0 0
chrX:154465488|154465847 hsa-miR-4767 1 0 0
chrX:154465488|154465847 hsa-miR-6075 0 1 0
chrX:154465488|154465847 hsa-miR-9899 1 0 0
chrX:154465488|154465847 hsa-miR-128-1-5p 1 0 0
chrX:154465488|154465847 hsa-miR-210-3p 1 0 0
chrX:154465488|154465847 hsa-miR-6720-5p 1 0 0
chrX:154465488|154465847 hsa-miR-3692-5p 0 1 0
chrX:154465488|154465847 hsa-miR-4786-5p 1 1 0
chrX:154465488|154465847 hsa-miR-4474-3p 0 1 0
chrX:154465488|154465847 hsa-miR-6842-3p 1 1 0
chrX:154465488|154465847 hsa-miR-6776-5p 0 1 0
chrX:154465488|154465847 hsa-miR-6787-3p 0 1 0
chrX:154465488|154465847 hsa-miR-4711-3p 0 1 0
chrX:154465488|154465847 hsa-miR-5008-5p 1 0 0
chrX:154465488|154465847 hsa-miR-6882-3p 1 0 0
chrX:154465488|154465847 hsa-miR-6858-3p 1 0 0
chrX:154465488|154465847 hsa-miR-4436b-5p 1 1 0
chrX:154465488|154465847 hsa-miR-7109-3p 0 1 0
chrX:154465488|154465847 hsa-miR-1226-5p 1 1 0
chrX:154465488|154465847 hsa-miR-4763-5p 1 0 0
chrX:154465488|154465847 hsa-miR-6894-3p 1 1 0
chrX:154465488|154465847 hsa-miR-4640-5p 1 1 0
chrX:154465488|154465847 hsa-miR-5001-3p 0 1 0
chrX:154465488|154465847 hsa-miR-7854-3p 0 1 0
chrX:154465488|154465847 hsa-miR-6878-3p 0 1 0
chrX:154465488|154465847 hsa-miR-7156-3p 0 1 0
chrX:154465488|154465847 hsa-miR-3120-5p 1 0 0
chrX:154465488|154465847 hsa-miR-6811-3p 1 0 0
chrX:154465488|154465847 hsa-miR-6499-3p 0 1 0
chrX:154465488|154465847 hsa-miR-660-3p 0 1 0
chrX:154465488|154465847 hsa-miR-4687-5p 0 1 0
chrX:154465488|154465847 hsa-miR-3944-5p 0 1 0
chrX:154465488|154465847 hsa-miR-1180-5p 0 1 0
chrX:154465488|154465847 hsa-miR-4746-3p 1 0 0
chrX:154465488|154465847 hsa-miR-3160-5p 1 1 0
chrX:154465488|154465847 hsa-miR-1914-5p 1 0 0
chrX:154465488|154465847 hsa-miR-6738-3p 1 1 0
chrX:154465488|154465847 hsa-miR-6759-3p 1 0 0
chrX:154465488|154465847 hsa-miR-219a-2-3p 1 0 0
chrX:154465488|154465847 hsa-miR-6890-3p 0 1 0
chrX:154465488|154465847 hsa-miR-500a-3p 0 1 0
chrX:154465488|154465847 hsa-miR-4763-3p 1 0 0
chrX:154465488|154465847 hsa-miR-6816-5p 1 0 0
chrX:154465488|154465847 hsa-miR-1343-5p 1 0 0
chrX:154465488|154465847 hsa-miR-6722-3p 1 0 0
chrX:154465488|154465847 hsa-miR-3127-3p 1 0 0
chrX:154465488|154465847 hsa-miR-10392-5p 1 1 0
chrX:154465488|154465847 hsa-miR-1909-3p 1 0 0
chrX:154465488|154465847 hsa-miR-4649-5p 1 0 0
chrX:154465488|154465847 hsa-miR-4726-5p 1 1 0
chrX:154465488|154465847 hsa-miR-6889-5p 1 0 0
chrX:154465488|154465847 hsa-miR-939-5p 1 0 0
chrX:154465488|154465847 hsa-miR-3085-5p 0 1 0
chrX:154465488|154465847 hsa-miR-1199-5p 0 1 0
chrX:154465488|154465847 hsa-miR-5008-3p 1 0 0
chrX:154465488|154465847 hsa-miR-6877-3p 1 0 0
chrX:154465488|154465847 hsa-miR-324-3p 0 1 0
chrX:154465488|154465847 hsa-miR-6724-5p 1 0 0
chrX:154465488|154465847 hsa-miR-550a-5p 1 0 0
chrX:154465488|154465847 hsa-miR-4757-5p 0 1 0
chrX:154465488|154465847 hsa-miR-6511b-3p 1 0 0
chrX:154465488|154465847 hsa-miR-6529-3p 0 1 0
chrX:154465488|154465847 hsa-miR-7114-3p 0 1 0
chrX:154465488|154465847 hsa-miR-33b-3p 1 1 0
chrX:154465488|154465847 hsa-miR-4690-3p 1 1 0
chrX:154465488|154465847 hsa-miR-3622b-3p 0 1 0
chrX:154465488|154465847 hsa-miR-6737-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chrX:154465488|154465847
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence LRDAGVAAPGALLAQVHPVGLRGRAVGPQLAPVL
Nucleotide Sequence CTGCGTGATGCGGGGGTGGCTGCACCGGGTGCCCTTCTGGCTCAGGTGCATCCAGTTGGTCTTCGGGGCCGGGCAGTGGGTCCGCAGCTGGCACCTGTGCTCTGA

CircID chrX:154465488|154465847
ORF Type ORF2
Protein Length 83
Nucleotide Length 252
Protein Sequence MRGWLHRVPFWLRCIQLVFGAGQWVRSWHLCSEMHQPQLKRGSALRQRPQLGRCAQHLYRRAAGTEGTADGAGSGRKVESGEH
Nucleotide Sequence ATGCGGGGGTGGCTGCACCGGGTGCCCTTCTGGCTCAGGTGCATCCAGTTGGTCTTCGGGGCCGGGCAGTGGGTCCGCAGCTGGCACCTGTGCTCTGAGATGCACCAGCCACAGTTGAAGCGGGGATCAGCCTTGAGGCAGAGGCCACAGCTGGGCCGCTGCGCCCAGCACTTGTACAGGAGGGCTGCAGGCACAGAAGGCACTGCTGACGGAGCAGGCAGTGGCAGAAAAGTGGAAAGTGGGGAGCACTAG

CircID chrX:154465488|154465847
ORF Type ORF3
Protein Length 56
Nucleotide Length 168
Protein Sequence MQAQKALLTEQAVAEKWKVGSTRAPRPDPSSANCLRREAPWPMPSPRKLGGLSMGK
Nucleotide Sequence CTGCAGGCACAGAAGGCACTGCTGACGGAGCAGGCAGTGGCAGAAAAGTGGAAAGTGGGGAGCACTAGGGCCCCCAGACCCGACCCCAGCAGTGCCAATTGCCTTAGGAGGGAAGCTCCCTGGCCCATGCCTTCACCTCGGAAGCTGGGAGGCTTGTCTATGGGGAAG

CircID chrX:154465488|154465847
ORF Type ORF4
Protein Length 78
Nucleotide Length 234
Protein Sequence MPLPAPSAVPSVPAALLYKCWAQRPSCGLCLKADPRFNCGWCISEHRCQLRTHCPAPKTNWMHLSQKGTRCSHPRITQ
Nucleotide Sequence CTGCCACTGCCTGCTCCGTCAGCAGTGCCTTCTGTGCCTGCAGCCCTCCTGTACAAGTGCTGGGCGCAGCGGCCCAGCTGTGGCCTCTGCCTCAAGGCTGATCCCCGCTTCAACTGTGGCTGGTGCATCTCAGAGCACAGGTGCCAGCTGCGGACCCACTGCCCGGCCCCGAAGACCAACTGGATGCACCTGAGCCAGAAGGGCACCCGGTGCAGCCACCCCCGCATCACGCAG

CircID chrX:154465488|154465847
ORF Type ORF5
Protein Length 60
Nucleotide Length 183
Protein Sequence MLRQQCLLCLQPSCTSAGRSGPAVASASRLIPASTVAGASQSTGASCGPTARPRRPTGCT
Nucleotide Sequence CTGCTCCGTCAGCAGTGCCTTCTGTGCCTGCAGCCCTCCTGTACAAGTGCTGGGCGCAGCGGCCCAGCTGTGGCCTCTGCCTCAAGGCTGATCCCCGCTTCAACTGTGGCTGGTGCATCTCAGAGCACAGGTGCCAGCTGCGGACCCACTGCCCGGCCCCGAAGACCAACTGGATGCACCTGA

CircID chrX:154465488|154465847
ORF Type ORF6
Protein Length 61
Nucleotide Length 186
Protein Sequence MGQGASLLRQLALLGSGLGALVLPTFHFSATACSVSSAFCACSPPVQVLGAAAQLWPLPQG
Nucleotide Sequence ATGGGCCAGGGAGCTTCCCTCCTAAGGCAATTGGCACTGCTGGGGTCGGGTCTGGGGGCCCTAGTGCTCCCCACTTTCCACTTTTCTGCCACTGCCTGCTCCGTCAGCAGTGCCTTCTGTGCCTGCAGCCCTCCTGTACAAGTGCTGGGCGCAGCGGCCCAGCTGTGGCCTCTGCCTCAAGGCTGA

CircID chrX:154465488|154465847
ORF Type ORF7
Protein Length 40
Nucleotide Length 120
Protein Sequence MWLVHLRAQVPAADPLPGPEDQLDAPEPEGHPVQPPPHHA
Nucleotide Sequence CTGTGGCTGGTGCATCTCAGAGCACAGGTGCCAGCTGCGGACCCACTGCCCGGCCCCGAAGACCAACTGGATGCACCTGAGCCAGAAGGGCACCCGGTGCAGCCACCCCCGCATCACGCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites