CircRNA Information

General Information
circRNA Basic Information
CircID chrX:16760945|16761146
Strand +
CircType exon
Host Gene ENSG00000169895.5;
Algorism CIRI2;
Sequence CTCTGCCTCCTGGGTTCAAAAGCCTCCCTAGTAGCTGGGATTACAGGTGCCTGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACTATGTTGGCAAGGCTGGTCTCGAACTCCTGACCTCCGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCACGCATGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:16760945|16761146 hsa-miR-10a-5p 0 0 1
chrX:16760945|16761146 hsa-miR-10a-3p 0 0 1
chrX:16760945|16761146 hsa-miR-10b-5p 0 0 1
chrX:16760945|16761146 hsa-miR-10b-3p 0 0 1
chrX:16760945|16761146 hsa-miR-593-5p 0 0 1
chrX:16760945|16761146 hsa-miR-593-3p 0 0 1
chrX:16760945|16761146 hsa-miR-650 0 0 1
chrX:16760945|16761146 hsa-miR-541-5p 0 0 1
chrX:16760945|16761146 hsa-miR-541-3p 0 0 1
chrX:16760945|16761146 hsa-miR-665 0 1 1
chrX:16760945|16761146 hsa-miR-1321 0 0 1
chrX:16760945|16761146 hsa-miR-1827 0 0 1
chrX:16760945|16761146 hsa-miR-339-5p 0 1 1
chrX:16760945|16761146 hsa-miR-654-5p 0 0 1
chrX:16760945|16761146 hsa-miR-1207-5p 0 0 1
chrX:16760945|16761146 hsa-miR-548c-3p 0 0 1
chrX:16760945|16761146 hsa-miR-24 0 0 1
chrX:16760945|16761146 hsa-miR-612 0 1 0
chrX:16760945|16761146 hsa-miR-1268a 1 1 0
chrX:16760945|16761146 hsa-miR-2861 1 0 0
chrX:16760945|16761146 hsa-miR-3132 1 0 0
chrX:16760945|16761146 hsa-miR-3929 0 1 0
chrX:16760945|16761146 hsa-miR-1268b 1 1 0
chrX:16760945|16761146 hsa-miR-4651 1 0 0
chrX:16760945|16761146 hsa-miR-4739 1 1 0
chrX:16760945|16761146 hsa-miR-6134 0 1 0
chrX:16760945|16761146 hsa-miR-6840-3p 1 1 0
chrX:16760945|16761146 hsa-miR-671-5p 1 0 0
chrX:16760945|16761146 hsa-miR-3150a-3p 1 0 0
chrX:16760945|16761146 hsa-miR-6861-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6825-5p 1 0 0
chrX:16760945|16761146 hsa-miR-4687-3p 1 0 0
chrX:16760945|16761146 hsa-miR-6854-5p 0 1 0
chrX:16760945|16761146 hsa-miR-6089 1 1 0
chrX:16760945|16761146 hsa-miR-6880-5p 1 0 0
chrX:16760945|16761146 hsa-miR-4695-5p 0 1 0
chrX:16760945|16761146 hsa-miR-3622b-5p 0 1 0
chrX:16760945|16761146 hsa-miR-6806-5p 1 0 0
chrX:16760945|16761146 hsa-miR-197-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6849-3p 0 1 0
chrX:16760945|16761146 hsa-miR-6871-5p 0 1 0
chrX:16760945|16761146 hsa-miR-3180-3p 1 0 0
chrX:16760945|16761146 hsa-miR-6782-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6821-5p 1 1 0
chrX:16760945|16761146 hsa-miR-30b-3p 0 1 0
chrX:16760945|16761146 hsa-miR-6735-3p 0 1 0
chrX:16760945|16761146 hsa-miR-1229-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6771-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6749-5p 1 0 0
chrX:16760945|16761146 hsa-miR-4787-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6789-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6877-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6804-3p 0 1 0
chrX:16760945|16761146 hsa-miR-3140-3p 0 1 0
chrX:16760945|16761146 hsa-miR-20b-3p 0 1 0
chrX:16760945|16761146 hsa-miR-6732-3p 0 1 0
chrX:16760945|16761146 hsa-miR-3664-5p 0 1 0
chrX:16760945|16761146 hsa-miR-1233-5p 1 0 0
chrX:16760945|16761146 hsa-miR-1273h-5p 1 1 0
chrX:16760945|16761146 hsa-miR-4763-3p 1 0 0
chrX:16760945|16761146 hsa-miR-6769b-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6778-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6775-5p 1 0 0
chrX:16760945|16761146 hsa-miR-3180 1 0 0
chrX:16760945|16761146 hsa-miR-6737-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6754-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6756-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6769a-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6815-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6819-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6851-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6780a-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6862-5p 0 1 0
chrX:16760945|16761146 hsa-miR-328-5p 1 0 0
chrX:16760945|16761146 hsa-miR-4649-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6729-5p 1 0 0
chrX:16760945|16761146 hsa-miR-6846-5p 1 0 0
chrX:16760945|16761146 hsa-miR-939-5p 1 0 0
chrX:16760945|16761146 hsa-miR-7843-5p 1 0 0
chrX:16760945|16761146 hsa-miR-7107-3p 0 1 0
chrX:16760945|16761146 hsa-miR-6811-5p 1 0 0
chrX:16760945|16761146 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:16760945|16761146
ORF Type ORF1
Protein Length 64
Nucleotide Length 192
Protein Sequence MGSKASLVAGITGACHHARLIFVFLVETGFHYVGKAGLELLTSGDLPTSASQSAGITGLSHHAW
Nucleotide Sequence CTGGGTTCAAAAGCCTCCCTAGTAGCTGGGATTACAGGTGCCTGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACTATGTTGGCAAGGCTGGTCTCGAACTCCTGACCTCCGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCACGCATGG
CircID chrX:16760945|16761146
ORF Type ORF2
Protein Length 46
Nucleotide Length 141
Protein Sequence LPPGFKSLPSSWDYRCLPPCPANFCIFSRDRVSLCWQGWSRTPDLR
Nucleotide Sequence CTGCCTCCTGGGTTCAAAAGCCTCCCTAGTAGCTGGGATTACAGGTGCCTGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACTATGTTGGCAAGGCTGGTCTCGAACTCCTGACCTCCGGTGA
CircID chrX:16760945|16761146
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MGGRGGQITGGQEFETSLANIVKPCLY
Nucleotide Sequence TTGGGAGGCCGAGGTGGGCAGATCACCGGAGGTCAGGAGTTCGAGACCAGCCTTGCCAACATAGTGAAACCCTGTCTCTACTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab