CircRNA Information

General Information
circRNA Basic Information
CircID chrX:16870156|16870274
Strand -
CircType exon
Host Gene ENSG00000102054.16;
Algorism CIRI2;
Sequence TCCCCACTGTCGAAAGCCCGGGCCCCGTCTTGCTGCCTGGGTGCTCCCCAGACGCCGCGTCCTTCTTTCCTGCCTCCTCCCCGCTCGCGGGTACCGAGGTCTGAGGCGCTCTTCTCTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:16870156|16870274 hsa-miR-637 0 0 1
chrX:16870156|16870274 hsa-miR-650 1 0 1
chrX:16870156|16870274 hsa-miR-765 1 1 1
chrX:16870156|16870274 hsa-miR-939-5p 0 0 1
chrX:16870156|16870274 hsa-miR-939-3p 0 0 1
chrX:16870156|16870274 hsa-miR-940 0 0 1
chrX:16870156|16870274 hsa-miR-1253 0 0 1
chrX:16870156|16870274 hsa-miR-1827 0 0 1
chrX:16870156|16870274 hsa-miR-491-5p 0 0 1
chrX:16870156|16870274 hsa-miR-339-3p 0 1 1
chrX:16870156|16870274 hsa-miR-483-5p 0 0 1
chrX:16870156|16870274 hsa-miR-663a 1 0 0
chrX:16870156|16870274 hsa-miR-1538 1 1 0
chrX:16870156|16870274 hsa-miR-2861 1 0 0
chrX:16870156|16870274 hsa-miR-3141 1 0 0
chrX:16870156|16870274 hsa-miR-1268b 1 0 0
chrX:16870156|16870274 hsa-miR-4466 1 0 0
chrX:16870156|16870274 hsa-miR-4508 1 0 0
chrX:16870156|16870274 hsa-miR-4673 0 1 0
chrX:16870156|16870274 hsa-miR-4674 1 0 0
chrX:16870156|16870274 hsa-miR-4688 1 0 0
chrX:16870156|16870274 hsa-miR-4696 0 1 0
chrX:16870156|16870274 hsa-miR-4706 1 1 0
chrX:16870156|16870274 hsa-miR-4739 1 1 0
chrX:16870156|16870274 hsa-miR-6090 1 0 0
chrX:16870156|16870274 hsa-miR-8072 1 0 0
chrX:16870156|16870274 hsa-miR-8088 0 1 0
chrX:16870156|16870274 hsa-miR-8089 1 0 0
chrX:16870156|16870274 hsa-miR-4747-3p 1 1 0
chrX:16870156|16870274 hsa-miR-500b-3p 0 1 0
chrX:16870156|16870274 hsa-miR-6765-5p 1 0 0
chrX:16870156|16870274 hsa-miR-3150a-3p 0 1 0
chrX:16870156|16870274 hsa-miR-7106-5p 1 1 0
chrX:16870156|16870274 hsa-miR-6825-5p 1 0 0
chrX:16870156|16870274 hsa-miR-1227-5p 1 0 0
chrX:16870156|16870274 hsa-miR-3663-3p 0 1 0
chrX:16870156|16870274 hsa-miR-6089 1 0 0
chrX:16870156|16870274 hsa-miR-4695-5p 1 1 0
chrX:16870156|16870274 hsa-miR-4655-5p 1 0 0
chrX:16870156|16870274 hsa-miR-7109-5p 1 0 0
chrX:16870156|16870274 hsa-miR-1229-5p 1 0 0
chrX:16870156|16870274 hsa-miR-4640-5p 1 0 0
chrX:16870156|16870274 hsa-miR-1908-5p 1 0 0
chrX:16870156|16870274 hsa-miR-6771-5p 1 0 0
chrX:16870156|16870274 hsa-miR-4783-5p 1 0 0
chrX:16870156|16870274 hsa-miR-6749-5p 1 0 0
chrX:16870156|16870274 hsa-miR-4787-5p 1 0 0
chrX:16870156|16870274 hsa-miR-7112-5p 1 0 0
chrX:16870156|16870274 hsa-miR-7160-3p 0 1 0
chrX:16870156|16870274 hsa-miR-744-5p 1 0 0
chrX:16870156|16870274 hsa-miR-5197-3p 0 1 0
chrX:16870156|16870274 hsa-miR-6790-3p 0 1 0
chrX:16870156|16870274 hsa-miR-10400-5p 1 0 0
chrX:16870156|16870274 hsa-miR-1207-5p 1 0 0
chrX:16870156|16870274 hsa-miR-1233-5p 1 0 0
chrX:16870156|16870274 hsa-miR-4763-3p 1 0 0
chrX:16870156|16870274 hsa-miR-6865-5p 1 0 0
chrX:16870156|16870274 hsa-miR-6893-5p 1 0 0
chrX:16870156|16870274 hsa-miR-1343-5p 1 1 0
chrX:16870156|16870274 hsa-miR-5001-5p 1 0 0
chrX:16870156|16870274 hsa-miR-6743-5p 1 0 0
chrX:16870156|16870274 hsa-miR-6754-5p 1 0 0
chrX:16870156|16870274 hsa-miR-6819-5p 1 0 0
chrX:16870156|16870274 hsa-miR-11181-3p 1 1 0
chrX:16870156|16870274 hsa-miR-1249-5p 1 0 0
chrX:16870156|16870274 hsa-miR-6763-5p 1 1 0
chrX:16870156|16870274 hsa-miR-6808-5p 1 1 0
chrX:16870156|16870274 hsa-miR-6879-5p 1 0 0
chrX:16870156|16870274 hsa-miR-7111-5p 1 1 0
chrX:16870156|16870274 hsa-miR-4728-5p 1 1 0
chrX:16870156|16870274 hsa-miR-6836-5p 1 0 0
chrX:16870156|16870274 hsa-miR-10396a-5p 1 0 0
chrX:16870156|16870274 hsa-miR-10396b-5p 1 0 0
chrX:16870156|16870274 hsa-miR-328-5p 1 0 0
chrX:16870156|16870274 hsa-miR-4685-5p 1 0 0
chrX:16870156|16870274 hsa-miR-4745-5p 1 0 0
chrX:16870156|16870274 hsa-miR-4749-5p 1 1 0
chrX:16870156|16870274 hsa-miR-6777-5p 1 1 0
chrX:16870156|16870274 hsa-miR-6795-5p 1 0 0
chrX:16870156|16870274 hsa-miR-6846-5p 1 0 0
chrX:16870156|16870274 hsa-miR-6848-5p 1 0 0
chrX:16870156|16870274 hsa-miR-6858-5p 1 0 0
chrX:16870156|16870274 hsa-miR-6889-5p 1 0 0
chrX:16870156|16870274 hsa-miR-4723-5p 0 1 0
chrX:16870156|16870274 hsa-miR-6885-5p 1 1 0
chrX:16870156|16870274 hsa-miR-10396a-3p 1 0 0
chrX:16870156|16870274 hsa-miR-4667-5p 0 1 0
chrX:16870156|16870274 hsa-miR-6724-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:16870156|16870274
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MSKARAPSCCLGAPQTPRPSFLPPPRSRVPRSEALFS
Nucleotide Sequence CTGTCGAAAGCCCGGGCCCCGTCTTGCTGCCTGGGTGCTCCCCAGACGCCGCGTCCTTCTTTCCTGCCTCCTCCCCGCTCGCGGGTACCGAGGTCTGAGGCGCTCTTCTCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab