CircRNA Information

General Information
circRNA Basic Information
CircID chrX:18983855|18984010
Strand -
CircType exon
Host Gene ENSG00000044446.10;
Algorism CIRI2;
Sequence CTGGTAACACAGGATGGTTTGCTGCACCAGCCGCGCGTACCCGTCCAAGCGGACCCCGGAATTGCTCCTGCTCCGCATCTCCCCGAGGCTCCCAGGCCGCAGCGCCCGATCTGCCGCGTGGGCGCGGGACGTCGGGGCTGTGGCCTCCAAGCGGGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:18983855|18984010 hsa-miR-107 0 0 1
chrX:18983855|18984010 hsa-miR-184 0 0 1
chrX:18983855|18984010 hsa-miR-432-5p 0 0 1
chrX:18983855|18984010 hsa-miR-432-3p 0 0 1
chrX:18983855|18984010 hsa-miR-545-5p 0 0 1
chrX:18983855|18984010 hsa-miR-545-3p 0 0 1
chrX:18983855|18984010 hsa-miR-650 0 0 1
chrX:18983855|18984010 hsa-miR-661 0 1 1
chrX:18983855|18984010 hsa-miR-658 1 0 1
chrX:18983855|18984010 hsa-miR-920 1 0 1
chrX:18983855|18984010 hsa-miR-1234-3p 0 0 1
chrX:18983855|18984010 hsa-miR-1234 0 0 1
chrX:18983855|18984010 hsa-miR-615-5p 0 0 1
chrX:18983855|18984010 hsa-miR-542-5p 0 0 1
chrX:18983855|18984010 hsa-miR-103 0 0 1
chrX:18983855|18984010 hsa-miR-138 0 0 1
chrX:18983855|18984010 hsa-miR-768-5p 0 0 1
chrX:18983855|18984010 hsa-miR-608 1 0 0
chrX:18983855|18984010 hsa-miR-637 1 1 0
chrX:18983855|18984010 hsa-miR-638 1 0 0
chrX:18983855|18984010 hsa-miR-639 0 1 0
chrX:18983855|18984010 hsa-miR-663a 1 0 0
chrX:18983855|18984010 hsa-miR-548q 0 1 0
chrX:18983855|18984010 hsa-miR-3137 1 0 0
chrX:18983855|18984010 hsa-miR-3665 1 0 0
chrX:18983855|18984010 hsa-miR-4449 1 0 0
chrX:18983855|18984010 hsa-miR-4479 0 1 0
chrX:18983855|18984010 hsa-miR-4706 1 0 0
chrX:18983855|18984010 hsa-miR-5572 1 0 0
chrX:18983855|18984010 hsa-miR-6081 1 0 0
chrX:18983855|18984010 hsa-miR-6090 1 0 0
chrX:18983855|18984010 hsa-miR-8089 1 0 0
chrX:18983855|18984010 hsa-miR-12115 1 0 0
chrX:18983855|18984010 hsa-miR-138-5p 0 1 0
chrX:18983855|18984010 hsa-miR-6825-5p 1 1 0
chrX:18983855|18984010 hsa-miR-6799-5p 1 0 0
chrX:18983855|18984010 hsa-miR-139-3p 1 0 0
chrX:18983855|18984010 hsa-miR-6820-5p 0 1 0
chrX:18983855|18984010 hsa-miR-6727-5p 1 0 0
chrX:18983855|18984010 hsa-miR-6871-5p 0 1 0
chrX:18983855|18984010 hsa-miR-3180-3p 1 0 0
chrX:18983855|18984010 hsa-miR-6827-5p 1 1 0
chrX:18983855|18984010 hsa-miR-6798-5p 1 0 0
chrX:18983855|18984010 hsa-miR-1228-5p 1 0 0
chrX:18983855|18984010 hsa-miR-92b-5p 1 0 0
chrX:18983855|18984010 hsa-miR-3648 1 0 0
chrX:18983855|18984010 hsa-miR-6824-5p 1 0 0
chrX:18983855|18984010 hsa-miR-7850-5p 1 0 0
chrX:18983855|18984010 hsa-miR-3944-5p 0 1 0
chrX:18983855|18984010 hsa-miR-6715a-3p 0 1 0
chrX:18983855|18984010 hsa-miR-6856-3p 0 1 0
chrX:18983855|18984010 hsa-miR-4717-5p 0 1 0
chrX:18983855|18984010 hsa-miR-3186-3p 0 1 0
chrX:18983855|18984010 hsa-miR-6812-5p 1 0 0
chrX:18983855|18984010 hsa-miR-6870-5p 1 0 0
chrX:18983855|18984010 hsa-miR-6775-5p 1 0 0
chrX:18983855|18984010 hsa-miR-6726-5p 1 0 0
chrX:18983855|18984010 hsa-miR-6743-5p 1 0 0
chrX:18983855|18984010 hsa-miR-7107-5p 0 1 0
chrX:18983855|18984010 hsa-miR-6722-3p 1 0 0
chrX:18983855|18984010 hsa-miR-3620-5p 1 0 0
chrX:18983855|18984010 hsa-miR-10396a-5p 1 0 0
chrX:18983855|18984010 hsa-miR-10396b-5p 1 0 0
chrX:18983855|18984010 hsa-miR-1909-3p 1 0 0
chrX:18983855|18984010 hsa-miR-328-5p 1 0 0
chrX:18983855|18984010 hsa-miR-6777-5p 1 1 0
chrX:18983855|18984010 hsa-miR-6887-5p 1 0 0
chrX:18983855|18984010 hsa-miR-6889-5p 1 1 0
chrX:18983855|18984010 hsa-miR-939-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chrX:18983855|18984010
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence LVTQDGLLHQPRVPVQADPGIAPAPHLPEAPRPQRPICRVGAGRRGCGLQAG
Nucleotide Sequence CTGGTAACACAGGATGGTTTGCTGCACCAGCCGCGCGTACCCGTCCAAGCGGACCCCGGAATTGCTCCTGCTCCGCATCTCCCCGAGGCTCCCAGGCCGCAGCGCCCGATCTGCCGCGTGGGCGCGGGACGTCGGGGCTGTGGCCTCCAAGCGGGT

CircID chrX:18983855|18984010
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MVCCTSRAYPSKRTPELLLLRISPRLPGRSARSAAWARDVGAVASKR
Nucleotide Sequence ATGGTTTGCTGCACCAGCCGCGCGTACCCGTCCAAGCGGACCCCGGAATTGCTCCTGCTCCGCATCTCCCCGAGGCTCCCAGGCCGCAGCGCCCGATCTGCCGCGTGGGCGCGGGACGTCGGGGCTGTGGCCTCCAAGCGG

CircID chrX:18983855|18984010
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MEATAPTSRAHAADRALRPGSLGEMRSRSNSGVRLDGYARLVQQTILCYQ
Nucleotide Sequence TTGGAGGCCACAGCCCCGACGTCCCGCGCCCACGCGGCAGATCGGGCGCTGCGGCCTGGGAGCCTCGGGGAGATGCGGAGCAGGAGCAATTCCGGGGTCCGCTTGGACGGGTACGCGCGGCTGGTGCAGCAAACCATCCTGTGTTACCAG

CircID chrX:18983855|18984010
ORF Type ORF4
Protein Length 31
Nucleotide Length 93
Protein Sequence MGASGRCGAGAIPGSAWTGTRGWCSKPSCVT
Nucleotide Sequence CTGGGAGCCTCGGGGAGATGCGGAGCAGGAGCAATTCCGGGGTCCGCTTGGACGGGTACGCGCGGCTGGTGCAGCAAACCATCCTGTGTTACC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites