CircNet

General Information

circRNA Basic Information

CircID	chrX:24005989\|24025058
Strand	-
CircType	exon
Host Gene	ENSG00000174010.9;
Algorism	find_circ;CIRI2;DCC;
Sequence	GACTTATCCAGAGGGGGCTGCAGGCGAGCACTCTCGTGCCCCGCCGGAGCGACCCGGCTCGTGCCGGGAGCGGCTGCTCGTAGACGTCCGAGGAGCCTGCCGAGTGCCGTCCCGGCGCCCGACCGCCCACCCATCGGCCCGCTGGCCCGGTTCTTCCTGATGCAGACTGCCGTCCACTAGAGGCTGGACAGGACCCCCCGAGGTGATTCATGGCAGGGGACGTGGAAGGATTCTGTTCCTCCATCCACGACACCAGTGTCTCTGCTGGGTTCAGAGCACTGTATGAGGAGGGATTGCTTCTTGATGTCACTCTGGTTATTGAAGATCATCAGTTCCAGGCCCATAAAGCACTCTTGGCCACCCAGAGTGATTACTTCAGAATTATGTTTACTGCAGACATGAGGGAACGAGATCAGGACAAAATTCATTTAAAAGGTCTAACAGCTACCGGTTTCAGCCATGTCCTGCAATTTATGTACTATGGAACTATAGAGCTGAGTATGAATACCGTTCATGAGATTCTTCAGGCTGCCATGTATGTTCAACTTATAGAAGTGGTGAAGTTCTGCTGCTCTTTTCTCTTAGCGAAGATCTGCCTAGAAAATTGTGCAGAAATTATGAGACTCTTAGATGATTTCGGCGTAAACATCGAGGGAGTCAGGGAGAAGTTAGACACCTTTCTGCTAGACAACTTTGTGCCACTCATGTCTAGGCCTGACTTTCTGTCCTATCTGAGCTTTGAGAAGCTCATGTCTTACTTGGATAATGATCATCTGAGCAGGTTCCCAGAGATAGAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGGCATGATAGAAGACGCTGGAGACATACCGATACCATCATTCAGAATATCCGGTTTTGCTTGATGACCCCAACCAGCGTTTTTGAGAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chrX:24005989\|24025058	hsa-miR-29b-1-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chrX:24005989\|24025058
ORF Type	ORF1
Protein Length	235
Nucleotide Length	705
Protein Sequence	MAGDVEGFCSSIHDTSVSAGFRALYEEGLLLDVTLVIEDHQFQAHKALLATQSDYFRIMFTADMRERDQDKIHLKGLTATGFSHVLQFMYYGTIELSMNTVHEILQAAMYVQLIEVVKFCCSFLLAKICLENCAEIMRLLDDFGVNIEGVREKLDTFLLDNFVPLMSRPDFLSYLSFEKLMSYLDNDHLSRFPEIELYEAVQSWLRHDRRRWRHTDTIIQNIRFCLMTPTSVFEK
Nucleotide Sequence	ATGGCAGGGGACGTGGAAGGATTCTGTTCCTCCATCCACGACACCAGTGTCTCTGCTGGGTTCAGAGCACTGTATGAGGAGGGATTGCTTCTTGATGTCACTCTGGTTATTGAAGATCATCAGTTCCAGGCCCATAAAGCACTCTTGGCCACCCAGAGTGATTACTTCAGAATTATGTTTACTGCAGACATGAGGGAACGAGATCAGGACAAAATTCATTTAAAAGGTCTAACAGCTACCGGTTTCAGCCATGTCCTGCAATTTATGTACTATGGAACTATAGAGCTGAGTATGAATACCGTTCATGAGATTCTTCAGGCTGCCATGTATGTTCAACTTATAGAAGTGGTGAAGTTCTGCTGCTCTTTTCTCTTAGCGAAGATCTGCCTAGAAAATTGTGCAGAAATTATGAGACTCTTAGATGATTTCGGCGTAAACATCGAGGGAGTCAGGGAGAAGTTAGACACCTTTCTGCTAGACAACTTTGTGCCACTCATGTCTAGGCCTGACTTTCTGTCCTATCTGAGCTTTGAGAAGCTCATGTCTTACTTGGATAATGATCATCTGAGCAGGTTCCCAGAGATAGAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGGCATGATAGAAGACGCTGGAGACATACCGATACCATCATTCAGAATATCCGGTTTTGCTTGATGACCCCAACCAGCGTTTTTGAGAAG

CircID	chrX:24005989\|24025058
ORF Type	ORF2
Protein Length	84
Nucleotide Length	252
Protein Sequence	MNFVLISFPHVCSKHNSEVITLGGQECFMGLELMIFNNQSDIKKQSLLIQCSEPSRDTGVVDGGTESFHVPCHESPRGVLSSL*
Nucleotide Sequence	ATGAATTTTGTCCTGATCTCGTTCCCTCATGTCTGCAGTAAACATAATTCTGAAGTAATCACTCTGGGTGGCCAAGAGTGCTTTATGGGCCTGGAACTGATGATCTTCAATAACCAGAGTGACATCAAGAAGCAATCCCTCCTCATACAGTGCTCTGAACCCAGCAGAGACACTGGTGTCGTGGATGGAGGAACAGAATCCTTCCACGTCCCCTGCCATGAATCACCTCGGGGGGTCCTGTCCAGCCTCTAG

CircID	chrX:24005989\|24025058
ORF Type	ORF3
Protein Length	81
Nucleotide Length	243
Protein Sequence	MEEQNPSTSPAMNHLGGSCPASSGRQSASGRTGPAGRWVGGRAPGRHSAGSSDVYEQPLPARAGSLRRGTRVLACSPLWIS
Nucleotide Sequence	ATGGAGGAACAGAATCCTTCCACGTCCCCTGCCATGAATCACCTCGGGGGGTCCTGTCCAGCCTCTAGTGGACGGCAGTCTGCATCAGGAAGAACCGGGCCAGCGGGCCGATGGGTGGGCGGTCGGGCGCCGGGACGGCACTCGGCAGGCTCCTCGGACGTCTACGAGCAGCCGCTCCCGGCACGAGCCGGGTCGCTCCGGCGGGGCACGAGAGTGCTCGCCTGCAGCCCCCTCTGGATAAGT

CircID	chrX:24005989\|24025058
ORF Type	ORF4
Protein Length	56
Nucleotide Length	168
Protein Sequence	MSPASSIMPQPRLHSLVQLYLWEPAQMIIIQVRHELLKAQIGQKVRPRHEWHKVV*
Nucleotide Sequence	ATGTCTCCAGCGTCTTCTATCATGCCGCAGCCAAGACTGCACAGCCTCGTACAGCTCTATCTCTGGGAACCTGCTCAGATGATCATTATCCAAGTAAGACATGAGCTTCTCAAAGCTCAGATAGGACAGAAAGTCAGGCCTAGACATGAGTGGCACAAAGTTGTCTAG

CircID	chrX:24005989\|24025058
ORF Type	ORF5
Protein Length	55
Nucleotide Length	165
Protein Sequence	MSGTKLSSRKVSNFSLTPSMFTPKSSKSLIISAQFSRQIFAKRKEQQNFTTSIS*
Nucleotide Sequence	ATGAGTGGCACAAAGTTGTCTAGCAGAAAGGTGTCTAACTTCTCCCTGACTCCCTCGATGTTTACGCCGAAATCATCTAAGAGTCTCATAATTTCTGCACAATTTTCTAGGCAGATCTTCGCTAAGAGAAAAGAGCAGCAGAACTTCACCACTTCTATAAGTTGA

CircID	chrX:24005989\|24025058
ORF Type	ORF6
Protein Length	44
Nucleotide Length	132
Protein Sequence	MGGRSGAGTALGRLLGRLRAAAPGTSRVAPAGHESARLQPPLDK
Nucleotide Sequence	ATGGGTGGGCGGTCGGGCGCCGGGACGGCACTCGGCAGGCTCCTCGGACGTCTACGAGCAGCCGCTCCCGGCACGAGCCGGGTCGCTCCGGCGGGGCACGAGAGTGCTCGCCTGCAGCCCCCTCTGGATAAG

CircID	chrX:24005989\|24025058
ORF Type	ORF7
Protein Length	40
Nucleotide Length	120
Protein Sequence	MRRDCFLMSLWLLKIISSRPIKHSWPPRVITSELCLLQT*
Nucleotide Sequence	ATGAGGAGGGATTGCTTCTTGATGTCACTCTGGTTATTGAAGATCATCAGTTCCAGGCCCATAAAGCACTCTTGGCCACCCAGAGTGATTACTTCAGAATTATGTTTACTGCAGACATGA

CircID	chrX:24005989\|24025058
ORF Type	ORF8
Protein Length	32
Nucleotide Length	96
Protein Sequence	MMVSVCLQRLLSCRSQDCTASYSSISGNLLR*
Nucleotide Sequence	ATGATGGTATCGGTATGTCTCCAGCGTCTTCTATCATGCCGCAGCCAAGACTGCACAGCCTCGTACAGCTCTATCTCTGGGAACCTGCTCAGATGA

CircID	chrX:24005989\|24025058
ORF Type	ORF9
Protein Length	58
Nucleotide Length	174
Protein Sequence	VDGSLHQEEPGQRADGWAVGRRDGTRQAPRTSTSSRSRHEPGRSGGARECSPAAPSG*
Nucleotide Sequence	GTGGACGGCAGTCTGCATCAGGAAGAACCGGGCCAGCGGGCCGATGGGTGGGCGGTCGGGCGCCGGGACGGCACTCGGCAGGCTCCTCGGACGTCTACGAGCAGCCGCTCCCGGCACGAGCCGGGTCGCTCCGGCGGGGCACGAGAGTGCTCGCCTGCAGCCCCCTCTGGATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chrX:24005989\|24025058	FMR1	14	0	26
chrX:24005989\|24025058	NOP56	0	1	2
chrX:24005989\|24025058	MOV10	3	13	1
chrX:24005989\|24025058	ELAVL1	2	18	7
chrX:24005989\|24025058	NUMA1	0	0	1
chrX:24005989\|24025058	SF3B4	1	0	0
chrX:24005989\|24025058	RC3H1	0	0	1
chrX:24005989\|24025058	CNBP	1	0	4
chrX:24005989\|24025058	YTHDF1	0	0	1
chrX:24005989\|24025058	UPF1	0	2	0
chrX:24005989\|24025058	TNRC6A	0	0	1
chrX:24005989\|24025058	CAPRIN1	0	0	4
chrX:24005989\|24025058	CPSF7	0	5	3
chrX:24005989\|24025058	CPSF6	0	0	1
chrX:24005989\|24025058	NUDT21	0	0	1
chrX:24005989\|24025058	CPSF4	1	0	0
chrX:24005989\|24025058	CPSF3	1	0	0
chrX:24005989\|24025058	AGO2	0	0	9
chrX:24005989\|24025058	DGCR8	3	0	0
chrX:24005989\|24025058	QKI	0	1	0
chrX:24005989\|24025058	SRSF1	1	2	7
chrX:24005989\|24025058	NOP58	2	3	7
chrX:24005989\|24025058	DHX9	0	1	0
chrX:24005989\|24025058	CSTF2	0	1	0
chrX:24005989\|24025058	U2AF1	1	0	8
chrX:24005989\|24025058	U2AF2	8	35	12
chrX:24005989\|24025058	RBM10	1	0	0
chrX:24005989\|24025058	FIP1L1	0	0	1
chrX:24005989\|24025058	PTBP1	1	7	1
chrX:24005989\|24025058	HNRNPC	0	10	4
chrX:24005989\|24025058	HNRNPD	0	2	0
chrX:24005989\|24025058	TRA2A	0	0	4
chrX:24005989\|24025058	ZNF184	0	0	2
chrX:24005989\|24025058	DDX3X	3	0	4
chrX:24005989\|24025058	ZC3H7B	1	0	5
chrX:24005989\|24025058	LARP4B	1	0	0
chrX:24005989\|24025058	SMNDC1	1	0	2
chrX:24005989\|24025058	HNRNPA1	0	33	2
chrX:24005989\|24025058	LIN28B	0	1	6
chrX:24005989\|24025058	LIN28A	0	0	1
chrX:24005989\|24025058	RANGAP1	2	0	3
chrX:24005989\|24025058	FXR1	1	0	5
chrX:24005989\|24025058	FXR2	2	0	6
chrX:24005989\|24025058	IGF2BP1	0	1	5
chrX:24005989\|24025058	BUD13	1	0	0
chrX:24005989\|24025058	IGF2BP3	2	2	6
chrX:24005989\|24025058	IGF2BP2	3	0	7
chrX:24005989\|24025058	FTO	2	0	0
chrX:24005989\|24025058	RBFOX2	0	2	0
chrX:24005989\|24025058	STAU1	0	2	0
chrX:24005989\|24025058	TAF15	0	1	0
chrX:24005989\|24025058	DICER1	4	0	1
chrX:24005989\|24025058	KHSRP	0	4	4
chrX:24005989\|24025058	PRPF8	1	0	1
chrX:24005989\|24025058	DDX42	2	0	0
chrX:24005989\|24025058	CSTF2T	0	3	2
chrX:24005989\|24025058	YWHAG	1	0	1
chrX:24005989\|24025058	FUS	0	1	0
chrX:24005989\|24025058	NONO	0	0	1
chrX:24005989\|24025058	WDR33	0	0	1
chrX:24005989\|24025058	DKC1	2	0	0
chrX:24005989\|24025058	AIFM1	1	0	1
chrX:24005989\|24025058	AGO1	2	0	5
chrX:24005989\|24025058	EWSR1	0	1	0
chrX:24005989\|24025058	EIF4A3	3	0	7
chrX:24005989\|24025058	FBL	5	2	10

CircRNA Information