CircRNA Information

General Information
circRNA Basic Information
CircID chrX:24078169|24078356
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCTTACGAAGCAAAAACATAAAGAAAAATAAGCCGGGCAGAGTGGCTCACGCCTGTAATCCCAGCACTTTGGAAGGCAGAGGCGGGCGGATCACCTGAGGTTAGGAGTTCAAGACCAGCCTGGGCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGTATGGTGGCAAGTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:24078169|24078356 hsa-miR-17-5p 0 0 1
chrX:24078169|24078356 hsa-miR-17-3p 0 0 1
chrX:24078169|24078356 hsa-miR-20a-5p 0 0 1
chrX:24078169|24078356 hsa-miR-20a-3p 0 0 1
chrX:24078169|24078356 hsa-miR-93-5p 0 0 1
chrX:24078169|24078356 hsa-miR-93-3p 0 0 1
chrX:24078169|24078356 hsa-miR-106a-5p 0 0 1
chrX:24078169|24078356 hsa-miR-106a-3p 0 0 1
chrX:24078169|24078356 hsa-miR-197-5p 0 0 1
chrX:24078169|24078356 hsa-miR-197-3p 0 0 1
chrX:24078169|24078356 hsa-miR-106b-5p 0 0 1
chrX:24078169|24078356 hsa-miR-106b-3p 0 0 1
chrX:24078169|24078356 hsa-miR-302a-5p 0 0 1
chrX:24078169|24078356 hsa-miR-302a-3p 0 0 1
chrX:24078169|24078356 hsa-miR-302b-5p 0 0 1
chrX:24078169|24078356 hsa-miR-302b-3p 0 0 1
chrX:24078169|24078356 hsa-miR-302c-5p 0 0 1
chrX:24078169|24078356 hsa-miR-302c-3p 0 0 1
chrX:24078169|24078356 hsa-miR-302d-5p 0 0 1
chrX:24078169|24078356 hsa-miR-302d-3p 0 0 1
chrX:24078169|24078356 hsa-miR-372-5p 0 0 1
chrX:24078169|24078356 hsa-miR-372-3p 0 0 1
chrX:24078169|24078356 hsa-miR-373-5p 0 0 1
chrX:24078169|24078356 hsa-miR-373-3p 0 0 1
chrX:24078169|24078356 hsa-miR-20b-5p 0 0 1
chrX:24078169|24078356 hsa-miR-20b-3p 0 0 1
chrX:24078169|24078356 hsa-miR-520e-5p 0 0 1
chrX:24078169|24078356 hsa-miR-520e-3p 0 0 1
chrX:24078169|24078356 hsa-miR-520b-5p 0 0 1
chrX:24078169|24078356 hsa-miR-520b-3p 0 0 1
chrX:24078169|24078356 hsa-miR-519d-5p 0 0 1
chrX:24078169|24078356 hsa-miR-519d-3p 0 0 1
chrX:24078169|24078356 hsa-miR-520g-5p 0 0 1
chrX:24078169|24078356 hsa-miR-520g-3p 0 0 1
chrX:24078169|24078356 hsa-miR-520h 0 0 1
chrX:24078169|24078356 hsa-miR-411-5p 0 0 1
chrX:24078169|24078356 hsa-miR-411-3p 0 0 1
chrX:24078169|24078356 hsa-miR-302e 0 0 1
chrX:24078169|24078356 hsa-miR-125a-3p 0 0 1
chrX:24078169|24078356 hsa-miR-129-5p 0 0 1
chrX:24078169|24078356 hsa-miR-512-3p 0 0 1
chrX:24078169|24078356 hsa-miR-941 1 0 1
chrX:24078169|24078356 hsa-miR-324-3p 0 0 1
chrX:24078169|24078356 hsa-miR-520d-3p 0 0 1
chrX:24078169|24078356 hsa-miR-520a-3p 0 0 1
chrX:24078169|24078356 hsa-miR-520c-3p 0 0 1
chrX:24078169|24078356 hsa-miR-590-3p 0 0 1
chrX:24078169|24078356 hsa-miR-638 1 0 0
chrX:24078169|24078356 hsa-miR-1303 0 1 0
chrX:24078169|24078356 hsa-miR-1538 1 0 0
chrX:24078169|24078356 hsa-miR-3159 1 1 0
chrX:24078169|24078356 hsa-miR-4452 1 1 0
chrX:24078169|24078356 hsa-miR-668-3p 1 1 0
chrX:24078169|24078356 hsa-miR-6747-3p 1 0 0
chrX:24078169|24078356 hsa-miR-4726-3p 1 0 0
chrX:24078169|24078356 hsa-miR-6842-3p 1 0 0
chrX:24078169|24078356 hsa-miR-4707-3p 0 1 0
chrX:24078169|24078356 hsa-miR-4715-3p 0 1 0
chrX:24078169|24078356 hsa-miR-6501-5p 1 0 0
chrX:24078169|24078356 hsa-miR-6504-3p 0 1 0
chrX:24078169|24078356 hsa-miR-6777-3p 0 1 0
chrX:24078169|24078356 hsa-miR-2277-5p 1 0 0
chrX:24078169|24078356 hsa-miR-6855-5p 0 1 0
chrX:24078169|24078356 hsa-miR-7151-3p 1 0 0
chrX:24078169|24078356 hsa-miR-3150b-5p 0 1 0
chrX:24078169|24078356 hsa-miR-5581-5p 0 1 0
chrX:24078169|24078356 hsa-miR-619-5p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:24078169|24078356
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MRLGVQDQPGQHGETPSLLKIQKLAGYGGKC
Nucleotide Sequence CTGAGGTTAGGAGTTCAAGACCAGCCTGGGCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGTATGGTGGCAAGTGC
CircID chrX:24078169|24078356
ORF Type ORF2
Protein Length 46
Nucleotide Length 141
Protein Sequence MGFHHVAQAGLELLTSGDPPASAFQSAGITGVSHSARLIFLYVFAS
Nucleotide Sequence ATGGGGTTTCACCATGTTGCCCAGGCTGGTCTTGAACTCCTAACCTCAGGTGATCCGCCCGCCTCTGCCTTCCAAAGTGCTGGGATTACAGGCGTGAGCCACTCTGCCCGGCTTATTTTTCTTTATGTTTTTGCTTCGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab