CircNet

General Information

circRNA Basic Information

CircID	chrX:24748311\|24888122
Strand	+
CircType	exon
Host Gene	ENSG00000101868.10;
Algorism	CIRI2;find_circ;DCC;
Sequence	GATGGAGAACAAGAACAGATCCCTGAGTTGCCAGATCCAAGCTTAGAAATGGGCATTTTGCCCAGAGAGATCCGGAAACTGGTAGAACGGAGAAAACAAGTCAAACAGCTAATGAAACAGCAAGACTTAAATCCAGACCTTATTCTTCAGATTTTGATGCATACGAAAGAGATGGTACAAAAGATGAATCTTGAAGTTATTTATGGAGATACAGATTCAATTATGATAAACACCAATAGCACCAATCTGGAAGAAGTATTTAAGTTGGGAAACAAGGGCTGGTTGATATGTGAAGAGCCAACCTGTCGCAATCGAACTCGTCACCTTCCCCTTCAATTCTCCCGAACTGGGCCTCTTTGCCCAGCCTGCATGAAAGCTACACTTCAACCAGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chrX:24748311\|24888122
ORF Type	ORF1
Protein Length	115
Nucleotide Length	345
Protein Sequence	MGILPREIRKLVERRKQVKQLMKQQDLNPDLILQILMHTKEMVQKMNLEVIYGDTDSIMINTNSTNLEEVFKLGNKGWLICEEPTCRNRTRHLPLQFSRTGPLCPACMKATLQPE
Nucleotide Sequence	ATGGGCATTTTGCCCAGAGAGATCCGGAAACTGGTAGAACGGAGAAAACAAGTCAAACAGCTAATGAAACAGCAAGACTTAAATCCAGACCTTATTCTTCAGATTTTGATGCATACGAAAGAGATGGTACAAAAGATGAATCTTGAAGTTATTTATGGAGATACAGATTCAATTATGATAAACACCAATAGCACCAATCTGGAAGAAGTATTTAAGTTGGGAAACAAGGGCTGGTTGATATGTGAAGAGCCAACCTGTCGCAATCGAACTCGTCACCTTCCCCTTCAATTCTCCCGAACTGGGCCTCTTTGCCCAGCCTGCATGAAAGCTACACTTCAACCAGAG

CircID	chrX:24748311\|24888122
ORF Type	ORF2
Protein Length	57
Nucleotide Length	171
Protein Sequence	LKCSFHAGWAKRPSSGELKGKVTSSIATGWLFTYQPALVSQLKYFFQIGAIGVYHN*
Nucleotide Sequence	TTGAAGTGTAGCTTTCATGCAGGCTGGGCAAAGAGGCCCAGTTCGGGAGAATTGAAGGGGAAGGTGACGAGTTCGATTGCGACAGGTTGGCTCTTCACATATCAACCAGCCCTTGTTTCCCAACTTAAATACTTCTTCCAGATTGGTGCTATTGGTGTTTATCATAATTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chrX:24748311\|24888122	NOP56	0	2	0
chrX:24748311\|24888122	ELAVL1	18	3	1
chrX:24748311\|24888122	UPF1	1	1	0
chrX:24748311\|24888122	CPSF7	4	0	0
chrX:24748311\|24888122	CPSF6	2	0	0
chrX:24748311\|24888122	NUDT21	3	0	1
chrX:24748311\|24888122	CPSF1	4	0	0
chrX:24748311\|24888122	FUS	7	2	0
chrX:24748311\|24888122	DGCR8	0	0	2
chrX:24748311\|24888122	SRSF1	0	0	2
chrX:24748311\|24888122	NOP58	0	3	4
chrX:24748311\|24888122	U2AF2	24	6	5
chrX:24748311\|24888122	HNRNPU	1	0	0
chrX:24748311\|24888122	DDX54	1	0	9
chrX:24748311\|24888122	RBM10	3	0	0
chrX:24748311\|24888122	HNRNPM	1	0	0
chrX:24748311\|24888122	PTBP1	47	0	0
chrX:24748311\|24888122	HNRNPC	74	1	9
chrX:24748311\|24888122	HNRNPD	2	0	0
chrX:24748311\|24888122	HNRNPA1	13	1	0
chrX:24748311\|24888122	ZC3H7B	3	0	0
chrX:24748311\|24888122	ACIN1	1	6	10
chrX:24748311\|24888122	LIN28B	5	0	2
chrX:24748311\|24888122	IGF2BP1	0	0	2
chrX:24748311\|24888122	IGF2BP3	0	0	2
chrX:24748311\|24888122	IGF2BP2	0	2	4
chrX:24748311\|24888122	TARDBP	6	0	0
chrX:24748311\|24888122	STAU1	1	0	0
chrX:24748311\|24888122	RBFOX2	0	1	0
chrX:24748311\|24888122	CSTF2T	6	1	3
chrX:24748311\|24888122	CSTF2	4	4	0
chrX:24748311\|24888122	WDR33	1	0	0
chrX:24748311\|24888122	FBL	0	0	1
chrX:24748311\|24888122	EWSR1	2	0	0
chrX:24748311\|24888122	EIF4A3	2	3	7
chrX:24748311\|24888122	AGO2	0	1	3

CircRNA Information