CircRNA Information

General Information
circRNA Basic Information
CircID chrX:30630310|30630691
Strand +
CircType exon
Host Gene ENSG00000232368.1;
Algorism CIRI2;
Sequence TCTCCAGGAAGTCACAGAGATGGGGGTCCGTGCGAGCAGAACCCAGGGCATGAAGATCCAAAAGAGCCTGATTCAGTTTTCTCTCCGGGGCCATGGCGGCTTTCATGGTGTCCGGGGTCTTACCCCACTCATCTTCAGCTGGCTTCTTGATGTCCTGGAAGAGAGCACGGCTGCCACGCTGGTTTTGCATCTTCAGGAGACGCTCGTAGCCCTTGCACTTTTCCTCAGCCAATTCGCGGAAGAAGTGGCTCACGCCTTCCAGAGCCACATGATCGCCGTCGAAATAGAAGCCCAGAGAGAGGTAGGTGTAGGAGGCCTGCAGGTACAAATTGACCAGGCTGTTGACGGCTGCGTCCACGTCAGTGGAATAATTCTGACGAAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:30630310|30630691 hsa-miR-17-5p 0 0 1
chrX:30630310|30630691 hsa-miR-17-3p 0 0 1
chrX:30630310|30630691 hsa-miR-20a-5p 0 0 1
chrX:30630310|30630691 hsa-miR-20a-3p 0 0 1
chrX:30630310|30630691 hsa-miR-93-5p 0 0 1
chrX:30630310|30630691 hsa-miR-93-3p 0 0 1
chrX:30630310|30630691 hsa-miR-106a-5p 0 0 1
chrX:30630310|30630691 hsa-miR-106a-3p 0 0 1
chrX:30630310|30630691 hsa-miR-130a-5p 0 0 1
chrX:30630310|30630691 hsa-miR-130a-3p 0 0 1
chrX:30630310|30630691 hsa-miR-134-5p 0 0 1
chrX:30630310|30630691 hsa-miR-134-3p 0 0 1
chrX:30630310|30630691 hsa-miR-185-5p 0 0 1
chrX:30630310|30630691 hsa-miR-185-3p 0 0 1
chrX:30630310|30630691 hsa-miR-106b-5p 0 0 1
chrX:30630310|30630691 hsa-miR-106b-3p 0 0 1
chrX:30630310|30630691 hsa-miR-301a-5p 0 0 1
chrX:30630310|30630691 hsa-miR-301a-3p 0 0 1
chrX:30630310|30630691 hsa-miR-130b-5p 0 0 1
chrX:30630310|30630691 hsa-miR-130b-3p 0 0 1
chrX:30630310|30630691 hsa-miR-326 0 0 1
chrX:30630310|30630691 hsa-miR-20b-5p 0 0 1
chrX:30630310|30630691 hsa-miR-20b-3p 0 0 1
chrX:30630310|30630691 hsa-miR-484 0 0 1
chrX:30630310|30630691 hsa-miR-519d-5p 0 0 1
chrX:30630310|30630691 hsa-miR-519d-3p 0 0 1
chrX:30630310|30630691 hsa-miR-505-5p 0 0 1
chrX:30630310|30630691 hsa-miR-505-3p 0 0 1
chrX:30630310|30630691 hsa-miR-555 0 0 1
chrX:30630310|30630691 hsa-miR-612 1 0 1
chrX:30630310|30630691 hsa-miR-617 0 0 1
chrX:30630310|30630691 hsa-miR-647 0 0 1
chrX:30630310|30630691 hsa-miR-421 0 0 1
chrX:30630310|30630691 hsa-miR-454-5p 0 0 1
chrX:30630310|30630691 hsa-miR-454-3p 0 0 1
chrX:30630310|30630691 hsa-miR-874-5p 0 0 1
chrX:30630310|30630691 hsa-miR-874-3p 0 0 1
chrX:30630310|30630691 hsa-miR-665 0 0 1
chrX:30630310|30630691 hsa-miR-760 1 1 1
chrX:30630310|30630691 hsa-miR-301b-5p 0 0 1
chrX:30630310|30630691 hsa-miR-301b-3p 0 0 1
chrX:30630310|30630691 hsa-miR-937-5p 0 0 1
chrX:30630310|30630691 hsa-miR-937-3p 0 0 1
chrX:30630310|30630691 hsa-miR-944 0 0 1
chrX:30630310|30630691 hsa-miR-1236-5p 0 0 1
chrX:30630310|30630691 hsa-miR-1236-3p 0 0 1
chrX:30630310|30630691 hsa-miR-1205 0 0 1
chrX:30630310|30630691 hsa-miR-548e-5p 0 0 1
chrX:30630310|30630691 hsa-miR-548e-3p 0 0 1
chrX:30630310|30630691 hsa-miR-1299 0 1 1
chrX:30630310|30630691 hsa-miR-885-3p 0 0 1
chrX:30630310|30630691 hsa-miR-146b-3p 0 0 1
chrX:30630310|30630691 hsa-miR-767-3p 0 0 1
chrX:30630310|30630691 hsa-miR-875-3p 0 0 1
chrX:30630310|30630691 hsa-miR-330-5p 1 1 1
chrX:30630310|30630691 hsa-miR-519b-3p 0 0 1
chrX:30630310|30630691 hsa-miR-519c-3p 0 0 1
chrX:30630310|30630691 hsa-miR-548a-3p 0 0 1
chrX:30630310|30630691 hsa-miR-548f 0 0 1
chrX:30630310|30630691 hsa-miR-1285 0 0 1
chrX:30630310|30630691 hsa-miR-519a 0 0 1
chrX:30630310|30630691 hsa-miR-636 1 0 0
chrX:30630310|30630691 hsa-miR-661 1 0 0
chrX:30630310|30630691 hsa-miR-658 1 0 0
chrX:30630310|30630691 hsa-miR-762 1 0 0
chrX:30630310|30630691 hsa-miR-663b 1 0 0
chrX:30630310|30630691 hsa-miR-1291 1 0 0
chrX:30630310|30630691 hsa-miR-3183 0 1 0
chrX:30630310|30630691 hsa-miR-4306 0 1 0
chrX:30630310|30630691 hsa-miR-4322 1 0 0
chrX:30630310|30630691 hsa-miR-4265 1 0 0
chrX:30630310|30630691 hsa-miR-4281 1 0 0
chrX:30630310|30630691 hsa-miR-3615 1 0 0
chrX:30630310|30630691 hsa-miR-3685 0 1 0
chrX:30630310|30630691 hsa-miR-3915 0 1 0
chrX:30630310|30630691 hsa-miR-4436a 0 1 0
chrX:30630310|30630691 hsa-miR-4440 1 0 0
chrX:30630310|30630691 hsa-miR-4449 1 0 0
chrX:30630310|30630691 hsa-miR-4467 1 0 0
chrX:30630310|30630691 hsa-miR-4486 1 0 0
chrX:30630310|30630691 hsa-miR-1587 1 0 0
chrX:30630310|30630691 hsa-miR-3960 1 0 0
chrX:30630310|30630691 hsa-miR-4644 0 1 0
chrX:30630310|30630691 hsa-miR-4656 1 0 0
chrX:30630310|30630691 hsa-miR-4674 1 0 0
chrX:30630310|30630691 hsa-miR-4689 1 0 0
chrX:30630310|30630691 hsa-miR-5739 0 1 0
chrX:30630310|30630691 hsa-miR-5787 1 0 0
chrX:30630310|30630691 hsa-miR-6124 0 1 0
chrX:30630310|30630691 hsa-miR-6860 1 0 0
chrX:30630310|30630691 hsa-miR-8077 1 0 0
chrX:30630310|30630691 hsa-miR-8085 1 0 0
chrX:30630310|30630691 hsa-miR-8089 1 0 0
chrX:30630310|30630691 hsa-miR-187-3p 1 0 0
chrX:30630310|30630691 hsa-miR-152-5p 0 1 0
chrX:30630310|30630691 hsa-miR-4665-3p 1 0 0
chrX:30630310|30630691 hsa-miR-671-5p 1 0 0
chrX:30630310|30630691 hsa-miR-149-5p 1 0 0
chrX:30630310|30630691 hsa-miR-27a-5p 1 0 0
chrX:30630310|30630691 hsa-miR-6880-5p 1 0 0
chrX:30630310|30630691 hsa-miR-6730-5p 1 1 0
chrX:30630310|30630691 hsa-miR-296-5p 1 0 0
chrX:30630310|30630691 hsa-miR-6875-3p 0 1 0
chrX:30630310|30630691 hsa-miR-181a-2-3p 0 1 0
chrX:30630310|30630691 hsa-miR-3189-5p 1 0 0
chrX:30630310|30630691 hsa-miR-6873-3p 0 1 0
chrX:30630310|30630691 hsa-miR-6742-5p 1 1 0
chrX:30630310|30630691 hsa-miR-939-3p 1 0 0
chrX:30630310|30630691 hsa-miR-3944-3p 1 0 0
chrX:30630310|30630691 hsa-miR-4786-3p 0 1 0
chrX:30630310|30630691 hsa-miR-1908-3p 1 0 0
chrX:30630310|30630691 hsa-miR-193b-5p 1 0 0
chrX:30630310|30630691 hsa-miR-3127-5p 1 0 0
chrX:30630310|30630691 hsa-miR-3667-3p 1 0 0
chrX:30630310|30630691 hsa-miR-3191-5p 0 1 0
chrX:30630310|30630691 hsa-miR-4715-5p 0 1 0
chrX:30630310|30630691 hsa-miR-6878-5p 0 1 0
chrX:30630310|30630691 hsa-miR-6828-3p 0 1 0
chrX:30630310|30630691 hsa-miR-4778-3p 0 1 0
chrX:30630310|30630691 hsa-miR-598-5p 1 0 0
chrX:30630310|30630691 hsa-miR-532-5p 1 0 0
chrX:30630310|30630691 hsa-miR-6746-3p 0 1 0
chrX:30630310|30630691 hsa-miR-6859-3p 0 1 0
chrX:30630310|30630691 hsa-miR-2277-5p 1 0 0
chrX:30630310|30630691 hsa-miR-1296-3p 0 1 0
chrX:30630310|30630691 hsa-miR-518c-5p 0 1 0
chrX:30630310|30630691 hsa-miR-6761-3p 0 1 0
chrX:30630310|30630691 hsa-miR-6800-3p 0 1 0
chrX:30630310|30630691 hsa-miR-3913-3p 0 1 0
chrX:30630310|30630691 hsa-miR-4650-5p 0 1 0
chrX:30630310|30630691 hsa-miR-337-3p 0 1 0
chrX:30630310|30630691 hsa-miR-10400-5p 1 0 0
chrX:30630310|30630691 hsa-miR-4763-3p 1 0 0
chrX:30630310|30630691 hsa-miR-6787-5p 1 0 0
chrX:30630310|30630691 hsa-miR-6737-5p 1 0 0
chrX:30630310|30630691 hsa-miR-6756-5p 1 0 0
chrX:30630310|30630691 hsa-miR-6722-3p 1 0 0
chrX:30630310|30630691 hsa-miR-6797-5p 1 0 0
chrX:30630310|30630691 hsa-miR-3620-5p 1 0 0
chrX:30630310|30630691 hsa-miR-5189-5p 1 0 0
chrX:30630310|30630691 hsa-miR-1909-3p 1 0 0
chrX:30630310|30630691 hsa-miR-4632-5p 1 0 0
chrX:30630310|30630691 hsa-miR-4685-5p 1 0 0
chrX:30630310|30630691 hsa-miR-4745-5p 1 1 0
chrX:30630310|30630691 hsa-miR-6729-5p 1 0 0
chrX:30630310|30630691 hsa-miR-6777-5p 1 0 0
chrX:30630310|30630691 hsa-miR-6858-5p 1 0 0
chrX:30630310|30630691 hsa-miR-3187-5p 1 0 0
chrX:30630310|30630691 hsa-miR-6831-5p 1 0 0
chrX:30630310|30630691 hsa-miR-1238-5p 0 1 0
chrX:30630310|30630691 hsa-miR-10396b-3p 1 0 0
chrX:30630310|30630691 hsa-miR-6799-3p 1 0 0
chrX:30630310|30630691 hsa-miR-5008-3p 1 0 0
chrX:30630310|30630691 hsa-miR-10398-3p 0 1 0
chrX:30630310|30630691 hsa-miR-6724-5p 1 0 0
chrX:30630310|30630691 hsa-miR-6805-3p 1 0 0
chrX:30630310|30630691 hsa-miR-6829-3p 0 1 0
chrX:30630310|30630691 hsa-miR-10400-3p 1 0 0
chrX:30630310|30630691 hsa-miR-6775-3p 1 0 0
chrX:30630310|30630691 hsa-miR-10392-3p 1 0 0
chrX:30630310|30630691 hsa-miR-4723-3p 0 1 0
chrX:30630310|30630691 hsa-miR-6783-3p 1 0 0
chrX:30630310|30630691 hsa-miR-10394-5p 0 1 0
chrX:30630310|30630691 hsa-miR-619-5p 1 0 0
chrX:30630310|30630691 hsa-miR-6811-5p 0 1 0
chrX:30630310|30630691 hsa-miR-146a-5p 1 0 0
chrX:30630310|30630691 hsa-miR-146b-5p 1 0 0
chrX:30630310|30630691 hsa-miR-340-3p 0 1 0
chrX:30630310|30630691 hsa-miR-3119 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:30630310|30630691
ORF Type ORF1
Protein Length 121
Nucleotide Length 363
Protein Sequence MGVRASRTQGMKIQKSLIQFSLRGHGGFHGVRGLTPLIFSWLLDVLEESTAATLVLHLQETLVALALFLSQFAEEVAHAFQSHMIAVEIEAQREVGVGGLQVQIDQAVDGCVHVSGIILTN
Nucleotide Sequence ATGGGGGTCCGTGCGAGCAGAACCCAGGGCATGAAGATCCAAAAGAGCCTGATTCAGTTTTCTCTCCGGGGCCATGGCGGCTTTCATGGTGTCCGGGGTCTTACCCCACTCATCTTCAGCTGGCTTCTTGATGTCCTGGAAGAGAGCACGGCTGCCACGCTGGTTTTGCATCTTCAGGAGACGCTCGTAGCCCTTGCACTTTTCCTCAGCCAATTCGCGGAAGAAGTGGCTCACGCCTTCCAGAGCCACATGATCGCCGTCGAAATAGAAGCCCAGAGAGAGGTAGGTGTAGGAGGCCTGCAGGTACAAATTGACCAGGCTGTTGACGGCTGCGTCCACGTCAGTGGAATAATTCTGACGAAT
CircID chrX:30630310|30630691
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MAAFMVSGVLPHSSSAGFLMSWKRARLPRWFCIFRRRS
Nucleotide Sequence ATGGCGGCTTTCATGGTGTCCGGGGTCTTACCCCACTCATCTTCAGCTGGCTTCTTGATGTCCTGGAAGAGAGCACGGCTGCCACGCTGGTTTTGCATCTTCAGGAGACGCTCGTAG
CircID chrX:30630310|30630691
ORF Type ORF3
Protein Length 112
Nucleotide Length 336
Protein Sequence MVNLYLQASYTYLSLGFYFDGDHVALEGVSHFFRELAEEKCKGYERLLKMQNQRGSRALFQDIKKPAEDEWGKTPDTMKAAMAPERKLNQALLDLHALGSARTDPHLCDFLE
Nucleotide Sequence CTGGTCAATTTGTACCTGCAGGCCTCCTACACCTACCTCTCTCTGGGCTTCTATTTCGACGGCGATCATGTGGCTCTGGAAGGCGTGAGCCACTTCTTCCGCGAATTGGCTGAGGAAAAGTGCAAGGGCTACGAGCGTCTCCTGAAGATGCAAAACCAGCGTGGCAGCCGTGCTCTCTTCCAGGACATCAAGAAGCCAGCTGAAGATGAGTGGGGTAAGACCCCGGACACCATGAAAGCCGCCATGGCCCCGGAGAGAAAACTGAATCAGGCTCTTTTGGATCTTCATGCCCTGGGTTCTGCTCGCACGGACCCCCATCTCTGTGACTTCCTGGAG
CircID chrX:30630310|30630691
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MTWTQPSTAWSICTCRPPTPTSLWASISTAIMWLWKA
Nucleotide Sequence CTGACGTGGACGCAGCCGTCAACAGCCTGGTCAATTTGTACCTGCAGGCCTCCTACACCTACCTCTCTCTGGGCTTCTATTTCGACGGCGATCATGTGGCTCTGGAAGGCGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab