CircRNA Information

General Information
circRNA Basic Information
CircID chrX:38804862|38805105
Strand +
CircType exon
Host Gene ENSG00000165175.14;
Algorism CIRI2;
Sequence GCCAACATCGTTGTCTAACCCGGGGTCAGCCAGGGGCACGTCGCGCAGCAAGCTGGGCACCATCACCGTCTGGTCCATGTTGTTCACGGCGCCAATGAAGCGATTCATGGCGTTAAAGAGCGAGTGCTTCTGGTTGTAGGTGTCGCAGATTTGCATCATGGTGGCCGCGCGGACGTTGGAGCGCAGGGACGCAGGGGCACGGGGATGGTCGGCCGGGTCAAGGGGATGCCCGCCTTCACGCGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:38804862|38805105 hsa-miR-614 0 0 1
chrX:38804862|38805105 hsa-miR-937-5p 0 0 1
chrX:38804862|38805105 hsa-miR-937-3p 0 0 1
chrX:38804862|38805105 hsa-miR-1322 0 0 1
chrX:38804862|38805105 hsa-miR-324-5p 0 1 1
chrX:38804862|38805105 hsa-miR-941 1 1 1
chrX:38804862|38805105 hsa-miR-566 0 0 1
chrX:38804862|38805105 hsa-miR-331-3p 0 0 1
chrX:38804862|38805105 hsa-miR-631 1 0 0
chrX:38804862|38805105 hsa-miR-663b 1 0 0
chrX:38804862|38805105 hsa-miR-1538 1 0 0
chrX:38804862|38805105 hsa-miR-3907 1 0 0
chrX:38804862|38805105 hsa-miR-4479 1 1 0
chrX:38804862|38805105 hsa-miR-4767 1 1 0
chrX:38804862|38805105 hsa-miR-4780 1 1 0
chrX:38804862|38805105 hsa-miR-4747-3p 1 0 0
chrX:38804862|38805105 hsa-miR-4665-3p 1 0 0
chrX:38804862|38805105 hsa-miR-125b-1-3p 0 1 0
chrX:38804862|38805105 hsa-miR-210-5p 0 1 0
chrX:38804862|38805105 hsa-miR-1225-3p 1 0 0
chrX:38804862|38805105 hsa-miR-6840-5p 1 0 0
chrX:38804862|38805105 hsa-miR-191-3p 0 1 0
chrX:38804862|38805105 hsa-miR-6765-3p 1 0 0
chrX:38804862|38805105 hsa-miR-6774-3p 0 1 0
chrX:38804862|38805105 hsa-miR-939-3p 1 0 0
chrX:38804862|38805105 hsa-miR-6772-3p 1 1 0
chrX:38804862|38805105 hsa-miR-6763-3p 1 0 0
chrX:38804862|38805105 hsa-miR-1908-3p 1 0 0
chrX:38804862|38805105 hsa-miR-7113-3p 1 0 0
chrX:38804862|38805105 hsa-miR-4783-5p 1 0 0
chrX:38804862|38805105 hsa-miR-5196-3p 0 1 0
chrX:38804862|38805105 hsa-miR-4776-5p 0 1 0
chrX:38804862|38805105 hsa-miR-6811-3p 1 0 0
chrX:38804862|38805105 hsa-miR-6889-3p 1 1 0
chrX:38804862|38805105 hsa-miR-6813-3p 1 0 0
chrX:38804862|38805105 hsa-miR-3619-3p 1 0 0
chrX:38804862|38805105 hsa-miR-204-5p 1 0 0
chrX:38804862|38805105 hsa-miR-6729-3p 0 1 0
chrX:38804862|38805105 hsa-miR-4726-5p 1 0 0
chrX:38804862|38805105 hsa-miR-4745-3p 1 0 0
chrX:38804862|38805105 hsa-miR-10396a-3p 1 0 0
chrX:38804862|38805105 hsa-miR-10396b-3p 1 0 0
chrX:38804862|38805105 hsa-miR-6791-5p 1 0 0
chrX:38804862|38805105 hsa-miR-6756-3p 1 0 0
chrX:38804862|38805105 hsa-miR-6810-3p 1 1 0
chrX:38804862|38805105 hsa-miR-10397-5p 0 1 0
chrX:38804862|38805105 hsa-miR-383-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chrX:38804862|38805105
ORF Type ORF1
Protein Length 58
Nucleotide Length 174
Protein Sequence MVHVVHGANEAIHGVKERVLLVVGVADLHHGGRADVGAQGRRGTGMVGRVKGMPAFTR
Nucleotide Sequence CTGGTCCATGTTGTTCACGGCGCCAATGAAGCGATTCATGGCGTTAAAGAGCGAGTGCTTCTGGTTGTAGGTGTCGCAGATTTGCATCATGGTGGCCGCGCGGACGTTGGAGCGCAGGGACGCAGGGGCACGGGGATGGTCGGCCGGGTCAAGGGGATGCCCGCCTTCACGCGC

CircID chrX:38804862|38805105
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MSNPGSARGTSRSKLGTITVWSMLFTAPMKRFMALKSECFWL
Nucleotide Sequence TTGTCTAACCCGGGGTCAGCCAGGGGCACGTCGCGCAGCAAGCTGGGCACCATCACCGTCTGGTCCATGTTGTTCACGGCGCCAATGAAGCGATTCATGGCGTTAAAGAGCGAGTGCTTCTGGTTGTAG

CircID chrX:38804862|38805105
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MVAARTLERRDAGARGWSAGSRGCPPSRA
Nucleotide Sequence ATGGTGGCCGCGCGGACGTTGGAGCGCAGGGACGCAGGGGCACGGGGATGGTCGGCCGGGTCAAGGGGATGCCCGCCTTCACGCGCT

CircID chrX:38804862|38805105
ORF Type ORF4
Protein Length 62
Nucleotide Length 186
Protein Sequence MRSNVRAATMMQICDTYNQKHSLFNAMNRFIGAVNNMDQTVMVPSLLRDVPLADPGLDNDVG
Nucleotide Sequence CTGCGCTCCAACGTCCGCGCGGCCACCATGATGCAAATCTGCGACACCTACAACCAGAAGCACTCGCTCTTTAACGCCATGAATCGCTTCATTGGCGCCGTGAACAACATGGACCAGACGGTGATGGTGCCCAGCTTGCTGCGCGACGTGCCCCTGGCTGACCCCGGGTTAGACAACGATGTTGGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites