CircRNA Information

General Information
circRNA Basic Information
CircID chrX:40074608|40074733
Strand +
CircType exon
Host Gene ENSG00000183337.15;
Algorism CIRI2;
Sequence CCTTTCCTCGACTCGCCAAATAAGTATTCACTGAACATGTACAAGGCCTTGCTACCTCAGCAGTCCTACAGCTTGGCCCAGCCGCTGTATTCTCCAGTCTGCACCAATGGGGAGCGCTTTCTCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:40074608|40074733 hsa-let-7b-5p 0 0 1
chrX:40074608|40074733 hsa-let-7b-3p 0 0 1
chrX:40074608|40074733 hsa-let-7c-5p 0 0 1
chrX:40074608|40074733 hsa-let-7c-3p 0 0 1
chrX:40074608|40074733 hsa-let-7d-5p 0 0 1
chrX:40074608|40074733 hsa-let-7d-3p 0 0 1
chrX:40074608|40074733 hsa-let-7e-5p 0 0 1
chrX:40074608|40074733 hsa-let-7e-3p 0 0 1
chrX:40074608|40074733 hsa-miR-98-5p 0 0 1
chrX:40074608|40074733 hsa-miR-98-3p 0 0 1
chrX:40074608|40074733 hsa-let-7g-5p 0 0 1
chrX:40074608|40074733 hsa-let-7g-3p 0 0 1
chrX:40074608|40074733 hsa-let-7i-5p 0 0 1
chrX:40074608|40074733 hsa-let-7i-3p 0 0 1
chrX:40074608|40074733 hsa-miR-202-5p 0 0 1
chrX:40074608|40074733 hsa-miR-202-3p 0 0 1
chrX:40074608|40074733 hsa-miR-518f-5p 0 0 1
chrX:40074608|40074733 hsa-miR-518f-3p 0 0 1
chrX:40074608|40074733 hsa-miR-518b 1 1 1
chrX:40074608|40074733 hsa-miR-518c-5p 0 0 1
chrX:40074608|40074733 hsa-miR-518c-3p 0 0 1
chrX:40074608|40074733 hsa-miR-518e-5p 0 0 1
chrX:40074608|40074733 hsa-miR-518e-3p 0 0 1
chrX:40074608|40074733 hsa-miR-611 0 0 1
chrX:40074608|40074733 hsa-miR-1288-5p 0 0 1
chrX:40074608|40074733 hsa-miR-1288-3p 0 0 1
chrX:40074608|40074733 hsa-miR-518a-3p 1 1 1
chrX:40074608|40074733 hsa-miR-518d-3p 1 1 1
chrX:40074608|40074733 hsa-miR-151-5p 0 0 1
chrX:40074608|40074733 hsa-let-7a 0 0 1
chrX:40074608|40074733 hsa-let-7f 0 0 1
chrX:40074608|40074733 hsa-miR-1183 1 0 0
chrX:40074608|40074733 hsa-miR-2110 0 1 0
chrX:40074608|40074733 hsa-miR-3142 0 1 0
chrX:40074608|40074733 hsa-miR-3135b 1 0 0
chrX:40074608|40074733 hsa-miR-4466 1 0 0
chrX:40074608|40074733 hsa-miR-4505 0 1 0
chrX:40074608|40074733 hsa-miR-4754 1 0 0
chrX:40074608|40074733 hsa-miR-6090 1 0 0
chrX:40074608|40074733 hsa-miR-8089 1 0 0
chrX:40074608|40074733 hsa-miR-93-3p 0 1 0
chrX:40074608|40074733 hsa-miR-6894-5p 1 1 0
chrX:40074608|40074733 hsa-miR-7160-5p 1 1 0
chrX:40074608|40074733 hsa-miR-6772-5p 1 0 0
chrX:40074608|40074733 hsa-miR-6829-5p 1 0 0
chrX:40074608|40074733 hsa-miR-4640-5p 1 0 0
chrX:40074608|40074733 hsa-miR-7162-3p 0 1 0
chrX:40074608|40074733 hsa-let-7f-5p 1 1 0
chrX:40074608|40074733 hsa-let-7a-5p 1 1 0
chrX:40074608|40074733 hsa-miR-6815-5p 1 0 0
chrX:40074608|40074733 hsa-miR-6851-5p 1 0 0
chrX:40074608|40074733 hsa-miR-675-5p 1 0 0
chrX:40074608|40074733 hsa-miR-3199 0 1 0
chrX:40074608|40074733 hsa-miR-6511b-5p 1 0 0
chrX:40074608|40074733 hsa-miR-7151-3p 1 0 0
chrX:40074608|40074733 hsa-miR-6849-5p 1 0 0
chrX:40074608|40074733 hsa-miR-520d-3p 1 1 0
chrX:40074608|40074733 hsa-miR-526b-3p 0 1 0
chrX:40074608|40074733 hsa-miR-524-3p 1 1 0
chrX:40074608|40074733 hsa-miR-525-3p 1 1 0
chrX:40074608|40074733 hsa-miR-520a-3p 1 1 0
chrX:40074608|40074733 hsa-miR-526a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chrX:40074608|40074733
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MNMYKALLPQQSYSLAQPLYSPVCTNGERFLY
Nucleotide Sequence CTGAACATGTACAAGGCCTTGCTACCTCAGCAGTCCTACAGCTTGGCCCAGCCGCTGTATTCTCCAGTCTGCACCAATGGGGAGCGCTTTCTCTAC

CircID chrX:40074608|40074733
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MENTAAGPSCRTAEVARPCTCSVNTYLASRGK
Nucleotide Sequence CTGGAGAATACAGCGGCTGGGCCAAGCTGTAGGACTGCTGAGGTAGCAAGGCCTTGTACATGTTCAGTGAATACTTATTTGGCGAGTCGAGGAAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites