CircRNA Information

General Information
circRNA Basic Information
CircID chrX:41347432|41347711
Strand +
CircType exon
Host Gene ENSG00000215301.8;
Algorism CIRI2;
Sequence CCCACCAGTCAACCCCCTGGGAGTTATAATTTCCTCCATATCCATCACTGTTGTAAAAGCCTCCATAGCCACCTCCACCAAATCCTCTGCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:41347432|41347711 hsa-miR-563 0 0 1
chrX:41347432|41347711 hsa-miR-650 1 0 1
chrX:41347432|41347711 hsa-miR-765 0 0 1
chrX:41347432|41347711 hsa-miR-541-5p 0 0 1
chrX:41347432|41347711 hsa-miR-541-3p 0 0 1
chrX:41347432|41347711 hsa-miR-922 0 0 1
chrX:41347432|41347711 hsa-miR-943 0 0 1
chrX:41347432|41347711 hsa-miR-654-5p 0 0 1
chrX:41347432|41347711 hsa-miR-608 1 0 0
chrX:41347432|41347711 hsa-miR-658 1 0 0
chrX:41347432|41347711 hsa-miR-1268a 1 0 0
chrX:41347432|41347711 hsa-miR-1275 1 0 0
chrX:41347432|41347711 hsa-miR-3125 1 0 0
chrX:41347432|41347711 hsa-miR-3188 1 0 0
chrX:41347432|41347711 hsa-miR-3196 1 0 0
chrX:41347432|41347711 hsa-miR-1268b 1 0 0
chrX:41347432|41347711 hsa-miR-4450 1 0 0
chrX:41347432|41347711 hsa-miR-4466 1 0 0
chrX:41347432|41347711 hsa-miR-4487 1 0 0
chrX:41347432|41347711 hsa-miR-4488 1 0 0
chrX:41347432|41347711 hsa-miR-4534 1 0 0
chrX:41347432|41347711 hsa-miR-4651 1 0 0
chrX:41347432|41347711 hsa-miR-4748 1 0 0
chrX:41347432|41347711 hsa-miR-5194 1 0 0
chrX:41347432|41347711 hsa-miR-5787 1 0 0
chrX:41347432|41347711 hsa-miR-6134 1 0 0
chrX:41347432|41347711 hsa-miR-6165 1 0 0
chrX:41347432|41347711 hsa-miR-8082 1 0 0
chrX:41347432|41347711 hsa-miR-1843 1 0 0
chrX:41347432|41347711 hsa-miR-12114 1 0 0
chrX:41347432|41347711 hsa-miR-6825-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6894-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6799-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6510-5p 1 0 0
chrX:41347432|41347711 hsa-miR-8071 1 0 0
chrX:41347432|41347711 hsa-miR-766-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6515-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6880-5p 1 0 0
chrX:41347432|41347711 hsa-miR-7847-3p 1 0 0
chrX:41347432|41347711 hsa-miR-3064-5p 1 0 0
chrX:41347432|41347711 hsa-miR-3187-3p 1 0 0
chrX:41347432|41347711 hsa-miR-6732-5p 1 0 0
chrX:41347432|41347711 hsa-miR-2467-3p 1 0 0
chrX:41347432|41347711 hsa-miR-6782-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6786-5p 1 0 0
chrX:41347432|41347711 hsa-miR-885-3p 1 0 0
chrX:41347432|41347711 hsa-miR-4764-5p 1 0 0
chrX:41347432|41347711 hsa-miR-296-3p 1 0 0
chrX:41347432|41347711 hsa-miR-4690-5p 1 0 0
chrX:41347432|41347711 hsa-miR-877-5p 1 0 0
chrX:41347432|41347711 hsa-miR-485-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6847-5p 1 0 0
chrX:41347432|41347711 hsa-miR-4787-5p 1 0 0
chrX:41347432|41347711 hsa-miR-1225-5p 1 0 0
chrX:41347432|41347711 hsa-miR-1250-5p 1 0 0
chrX:41347432|41347711 hsa-miR-1304-5p 1 0 0
chrX:41347432|41347711 hsa-miR-331-5p 1 0 0
chrX:41347432|41347711 hsa-miR-4709-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6769b-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6787-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6865-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6737-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6752-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6756-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6769a-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6803-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6815-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6819-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6842-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6851-5p 1 0 0
chrX:41347432|41347711 hsa-miR-7110-5p 1 0 0
chrX:41347432|41347711 hsa-miR-11181-3p 1 0 0
chrX:41347432|41347711 hsa-miR-6722-3p 1 0 0
chrX:41347432|41347711 hsa-miR-6751-5p 1 0 0
chrX:41347432|41347711 hsa-miR-7111-5p 1 0 0
chrX:41347432|41347711 hsa-miR-1909-3p 1 0 0
chrX:41347432|41347711 hsa-miR-6738-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6846-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6848-5p 1 0 0
chrX:41347432|41347711 hsa-miR-3679-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6849-5p 1 0 0
chrX:41347432|41347711 hsa-miR-6884-5p 1 0 0
chrX:41347432|41347711 hsa-miR-3119 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:41347432|41347711
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MGVIISSISITVVKASIATSTKSSA
Nucleotide Sequence CTGGGAGTTATAATTTCCTCCATATCCATCACTGTTGTAAAAGCCTCCATAGCCACCTCCACCAAATCCTCTGCT
CircID chrX:41347432|41347711
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MVEVAMEAFTTVMDMEEIITPRGLTGG
Nucleotide Sequence TTGGTGGAGGTGGCTATGGAGGCTTTTACAACAGTGATGGATATGGAGGAAATTATAACTCCCAGGGGGTTGACTGGTGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab