CircRNA Information

General Information
circRNA Basic Information
CircID chrX:47181281|47181554
Strand -
CircType exon
Host Gene ENSG00000182872.14;
Algorism CIRI2;
Sequence CAACAGGATGAGGGCTATGGCAACAGCCAGGGCACAGAGTCTTCCCTCTATGCCCATGGCTACCTCAAGGGCACCAAGGGCCCTGGCATCACTGGAACCAAAGGGGATCCCACTGGAGCAGGTGAGCCCCAGCATCTCTCTCTGCAGCTGTGGTGGGGGCCAGCAGGCATAAAGTCCCCGGCCCCATTATTCACAGGCATTGTCCCTGCCCTGTCCCTCCTTACAGGTCCCGAGGCCTCCCTAGAGCCTGGGGCCGACTCTGTGTCGATGCAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:47181281|47181554 hsa-let-7b-5p 0 0 1
chrX:47181281|47181554 hsa-let-7b-3p 0 0 1
chrX:47181281|47181554 hsa-let-7c-5p 0 0 1
chrX:47181281|47181554 hsa-let-7c-3p 0 0 1
chrX:47181281|47181554 hsa-let-7d-5p 0 0 1
chrX:47181281|47181554 hsa-let-7d-3p 0 0 1
chrX:47181281|47181554 hsa-let-7e-5p 0 0 1
chrX:47181281|47181554 hsa-let-7e-3p 0 0 1
chrX:47181281|47181554 hsa-miR-98-5p 0 0 1
chrX:47181281|47181554 hsa-miR-98-3p 0 0 1
chrX:47181281|47181554 hsa-let-7g-5p 0 0 1
chrX:47181281|47181554 hsa-let-7g-3p 0 0 1
chrX:47181281|47181554 hsa-let-7i-5p 0 0 1
chrX:47181281|47181554 hsa-let-7i-3p 0 0 1
chrX:47181281|47181554 hsa-miR-370-5p 0 0 1
chrX:47181281|47181554 hsa-miR-370-3p 0 0 1
chrX:47181281|47181554 hsa-miR-484 0 0 1
chrX:47181281|47181554 hsa-miR-202-5p 0 0 1
chrX:47181281|47181554 hsa-miR-202-3p 0 0 1
chrX:47181281|47181554 hsa-miR-492 0 0 1
chrX:47181281|47181554 hsa-miR-638 0 0 1
chrX:47181281|47181554 hsa-miR-659-5p 0 0 1
chrX:47181281|47181554 hsa-miR-659-3p 0 0 1
chrX:47181281|47181554 hsa-miR-874-5p 0 0 1
chrX:47181281|47181554 hsa-miR-874-3p 0 0 1
chrX:47181281|47181554 hsa-miR-938 0 0 1
chrX:47181281|47181554 hsa-miR-1257 0 1 1
chrX:47181281|47181554 hsa-miR-1321 0 0 1
chrX:47181281|47181554 hsa-miR-1825 0 0 1
chrX:47181281|47181554 hsa-miR-145-5p 0 0 1
chrX:47181281|47181554 hsa-miR-146b-3p 0 0 1
chrX:47181281|47181554 hsa-miR-199a-5p 0 0 1
chrX:47181281|47181554 hsa-miR-532-5p 0 0 1
chrX:47181281|47181554 hsa-miR-140-3p 0 0 1
chrX:47181281|47181554 hsa-miR-199b-5p 0 0 1
chrX:47181281|47181554 hsa-miR-1207-5p 1 1 1
chrX:47181281|47181554 hsa-miR-769-3p 1 1 1
chrX:47181281|47181554 hsa-miR-450b-3p 0 1 1
chrX:47181281|47181554 hsa-miR-491-3p 0 0 1
chrX:47181281|47181554 hsa-miR-7 0 0 1
chrX:47181281|47181554 hsa-miR-9 0 0 1
chrX:47181281|47181554 hsa-let-7a 0 0 1
chrX:47181281|47181554 hsa-let-7f 0 0 1
chrX:47181281|47181554 hsa-miR-129-3p 0 0 1
chrX:47181281|47181554 hsa-miR-663a 1 0 0
chrX:47181281|47181554 hsa-miR-658 1 0 0
chrX:47181281|47181554 hsa-miR-762 1 0 0
chrX:47181281|47181554 hsa-miR-921 1 0 0
chrX:47181281|47181554 hsa-miR-1538 1 0 0
chrX:47181281|47181554 hsa-miR-3155a 0 1 0
chrX:47181281|47181554 hsa-miR-4298 1 0 0
chrX:47181281|47181554 hsa-miR-3916 1 0 0
chrX:47181281|47181554 hsa-miR-3936 1 0 0
chrX:47181281|47181554 hsa-miR-3945 0 1 0
chrX:47181281|47181554 hsa-miR-4432 0 1 0
chrX:47181281|47181554 hsa-miR-4458 0 1 0
chrX:47181281|47181554 hsa-miR-4476 1 0 0
chrX:47181281|47181554 hsa-miR-3155b 0 1 0
chrX:47181281|47181554 hsa-miR-4656 1 0 0
chrX:47181281|47181554 hsa-miR-4688 1 0 0
chrX:47181281|47181554 hsa-miR-4689 1 1 0
chrX:47181281|47181554 hsa-miR-4706 1 0 0
chrX:47181281|47181554 hsa-miR-4739 1 1 0
chrX:47181281|47181554 hsa-miR-5739 1 0 0
chrX:47181281|47181554 hsa-miR-6069 1 0 0
chrX:47181281|47181554 hsa-miR-6085 1 0 0
chrX:47181281|47181554 hsa-miR-6090 1 0 0
chrX:47181281|47181554 hsa-miR-6127 1 0 0
chrX:47181281|47181554 hsa-miR-6132 1 0 0
chrX:47181281|47181554 hsa-miR-6133 1 1 0
chrX:47181281|47181554 hsa-miR-6860 1 0 0
chrX:47181281|47181554 hsa-miR-7974 1 0 0
chrX:47181281|47181554 hsa-miR-8089 1 0 0
chrX:47181281|47181554 hsa-miR-9500 0 1 0
chrX:47181281|47181554 hsa-miR-12118 1 1 0
chrX:47181281|47181554 hsa-miR-9-5p 0 1 0
chrX:47181281|47181554 hsa-miR-211-3p 1 0 0
chrX:47181281|47181554 hsa-miR-128-1-5p 0 1 0
chrX:47181281|47181554 hsa-miR-7-5p 0 1 0
chrX:47181281|47181554 hsa-miR-4731-5p 0 1 0
chrX:47181281|47181554 hsa-miR-6765-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6861-5p 1 0 0
chrX:47181281|47181554 hsa-miR-7106-5p 1 0 0
chrX:47181281|47181554 hsa-miR-27a-5p 0 1 0
chrX:47181281|47181554 hsa-miR-218-1-3p 0 1 0
chrX:47181281|47181554 hsa-miR-1236-5p 1 0 0
chrX:47181281|47181554 hsa-miR-7114-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6089 1 0 0
chrX:47181281|47181554 hsa-miR-6757-5p 1 0 0
chrX:47181281|47181554 hsa-miR-4695-5p 1 0 0
chrX:47181281|47181554 hsa-miR-3064-5p 0 1 0
chrX:47181281|47181554 hsa-miR-6820-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6727-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6721-5p 1 1 0
chrX:47181281|47181554 hsa-miR-7845-5p 1 1 0
chrX:47181281|47181554 hsa-miR-6787-3p 1 0 0
chrX:47181281|47181554 hsa-miR-3605-5p 1 0 0
chrX:47181281|47181554 hsa-miR-185-3p 1 0 0
chrX:47181281|47181554 hsa-miR-2467-5p 0 1 0
chrX:47181281|47181554 hsa-miR-3126-5p 1 1 0
chrX:47181281|47181554 hsa-miR-2467-3p 1 0 0
chrX:47181281|47181554 hsa-miR-4633-5p 0 1 0
chrX:47181281|47181554 hsa-miR-6810-5p 1 0 0
chrX:47181281|47181554 hsa-miR-5006-5p 1 1 0
chrX:47181281|47181554 hsa-miR-6735-3p 1 0 0
chrX:47181281|47181554 hsa-miR-615-5p 1 0 0
chrX:47181281|47181554 hsa-miR-7109-5p 1 0 0
chrX:47181281|47181554 hsa-miR-3944-3p 1 0 0
chrX:47181281|47181554 hsa-miR-1229-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6894-3p 0 1 0
chrX:47181281|47181554 hsa-miR-4640-5p 1 0 0
chrX:47181281|47181554 hsa-miR-1228-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6771-5p 1 0 0
chrX:47181281|47181554 hsa-miR-92b-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6834-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6501-5p 0 1 0
chrX:47181281|47181554 hsa-miR-149-3p 1 1 0
chrX:47181281|47181554 hsa-miR-6824-5p 1 0 0
chrX:47181281|47181554 hsa-miR-3162-5p 1 1 0
chrX:47181281|47181554 hsa-miR-3158-5p 0 1 0
chrX:47181281|47181554 hsa-miR-6886-5p 1 0 0
chrX:47181281|47181554 hsa-miR-103b 0 1 0
chrX:47181281|47181554 hsa-miR-7112-5p 1 0 0
chrX:47181281|47181554 hsa-miR-423-5p 1 0 0
chrX:47181281|47181554 hsa-miR-4776-3p 0 1 0
chrX:47181281|47181554 hsa-let-7f-5p 0 1 0
chrX:47181281|47181554 hsa-let-7a-5p 0 1 0
chrX:47181281|47181554 hsa-miR-3120-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6811-3p 1 0 0
chrX:47181281|47181554 hsa-miR-4687-5p 0 1 0
chrX:47181281|47181554 hsa-miR-6792-5p 1 0 0
chrX:47181281|47181554 hsa-miR-328-3p 0 1 0
chrX:47181281|47181554 hsa-miR-654-3p 0 1 0
chrX:47181281|47181554 hsa-miR-6851-3p 0 1 0
chrX:47181281|47181554 hsa-miR-744-3p 0 1 0
chrX:47181281|47181554 hsa-miR-4763-3p 1 1 0
chrX:47181281|47181554 hsa-miR-6787-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6816-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6775-5p 1 0 0
chrX:47181281|47181554 hsa-miR-5001-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6743-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6754-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6803-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6813-5p 1 0 0
chrX:47181281|47181554 hsa-miR-11181-3p 1 0 0
chrX:47181281|47181554 hsa-miR-1249-5p 1 1 0
chrX:47181281|47181554 hsa-miR-6779-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6780a-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6797-5p 1 1 0
chrX:47181281|47181554 hsa-miR-6808-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6875-5p 1 1 0
chrX:47181281|47181554 hsa-miR-6879-5p 1 1 0
chrX:47181281|47181554 hsa-miR-7111-5p 1 0 0
chrX:47181281|47181554 hsa-miR-3620-5p 1 0 0
chrX:47181281|47181554 hsa-miR-4728-5p 1 0 0
chrX:47181281|47181554 hsa-miR-5196-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6836-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6862-5p 0 1 0
chrX:47181281|47181554 hsa-miR-10396b-5p 1 0 0
chrX:47181281|47181554 hsa-miR-1237-5p 1 0 0
chrX:47181281|47181554 hsa-miR-1909-3p 1 0 0
chrX:47181281|47181554 hsa-miR-328-5p 1 0 0
chrX:47181281|47181554 hsa-miR-4632-5p 1 0 0
chrX:47181281|47181554 hsa-miR-4685-5p 1 1 0
chrX:47181281|47181554 hsa-miR-4745-5p 1 0 0
chrX:47181281|47181554 hsa-miR-4749-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6735-5p 0 1 0
chrX:47181281|47181554 hsa-miR-6794-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6795-5p 1 1 0
chrX:47181281|47181554 hsa-miR-6848-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6858-5p 1 1 0
chrX:47181281|47181554 hsa-miR-6883-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6887-5p 1 0 0
chrX:47181281|47181554 hsa-miR-4436b-3p 0 1 0
chrX:47181281|47181554 hsa-miR-4758-5p 1 0 0
chrX:47181281|47181554 hsa-miR-365a-5p 0 1 0
chrX:47181281|47181554 hsa-miR-6511b-5p 1 0 0
chrX:47181281|47181554 hsa-miR-7843-5p 0 1 0
chrX:47181281|47181554 hsa-miR-3173-3p 1 1 0
chrX:47181281|47181554 hsa-miR-6891-5p 1 1 0
chrX:47181281|47181554 hsa-miR-6785-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6762-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6893-3p 0 1 0
chrX:47181281|47181554 hsa-miR-10392-3p 0 1 0
chrX:47181281|47181554 hsa-miR-3085-3p 0 1 0
chrX:47181281|47181554 hsa-miR-4756-5p 0 1 0
chrX:47181281|47181554 hsa-miR-128-2-5p 1 0 0
chrX:47181281|47181554 hsa-miR-6504-5p 0 1 0
chrX:47181281|47181554 hsa-miR-3059-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chrX:47181281|47181554
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MQLWWGPAGIKSPAPLFTGIVPALSLLTGPEASLEPGADSVSMQ
Nucleotide Sequence CTGCAGCTGTGGTGGGGGCCAGCAGGCATAAAGTCCCCGGCCCCATTATTCACAGGCATTGTCCCTGCCCTGTCCCTCCTTACAGGTCCCGAGGCCTCCCTAGAGCCTGGGGCCGACTCTGTGTCGATGCAG
CircID chrX:47181281|47181554
ORF Type ORF2
Protein Length 54
Nucleotide Length 165
Protein Sequence MRAMATARAQSLPSMPMATSRAPRALASLEPKGIPLEQVSPSISLCSCGGGQQA
Nucleotide Sequence ATGAGGGCTATGGCAACAGCCAGGGCACAGAGTCTTCCCTCTATGCCCATGGCTACCTCAAGGGCACCAAGGGCCCTGGCATCACTGGAACCAAAGGGGATCCCACTGGAGCAGGTGAGCCCCAGCATCTCTCTCTGCAGCTGTGGTGGGGGCCAGCAGGCATAA
CircID chrX:47181281|47181554
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MGPGTLCLLAPTTAAERDAGAHLLQWDPLWFQ
Nucleotide Sequence ATGGGGCCGGGGACTTTATGCCTGCTGGCCCCCACCACAGCTGCAGAGAGAGATGCTGGGGCTCACCTGCTCCAGTGGGATCCCCTTTGGTTCCAGTGA
CircID chrX:47181281|47181554
ORF Type ORF4
Protein Length 49
Nucleotide Length 147
Protein Sequence MQREMLGLTCSSGIPFGSSDARALGALEVAMGIEGRLCALAVAIALILL
Nucleotide Sequence CTGCAGAGAGAGATGCTGGGGCTCACCTGCTCCAGTGGGATCCCCTTTGGTTCCAGTGATGCCAGGGCCCTTGGTGCCCTTGAGGTAGCCATGGGCATAGAGGGAAGACTCTGTGCCCTGGCTGTTGCCATAGCCCTCATCCTGTTG
CircID chrX:47181281|47181554
ORF Type ORF5
Protein Length 46
Nucleotide Length 141
Protein Sequence MPVNNGAGDFMPAGPHHSCRERCWGSPAPVGSPLVPVMPGPLVPLR
Nucleotide Sequence ATGCCTGTGAATAATGGGGCCGGGGACTTTATGCCTGCTGGCCCCCACCACAGCTGCAGAGAGAGATGCTGGGGCTCACCTGCTCCAGTGGGATCCCCTTTGGTTCCAGTGATGCCAGGGCCCTTGGTGCCCTTGAGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab