CircRNA Information

General Information
circRNA Basic Information
CircID chrX:47227072|47227469
Strand +
CircType exon
Host Gene ENSG00000102225.14;
Algorism CIRI2;
Sequence TGTCAGGAAGTTTGTGGATCCGCTCCCCCAGACTGAGGAAGAATGGATGTTTCATGGCATCCTCTGCGGAGATCCGATTTCGACCCTCAAACTGAGTGGGGGTGCGGGGAGGGGGATAGTATTGATATCTTCAACAAGTAGGTCTCTCTGCCCACCTCAGACCCTGCCCCTGGTTTGAGGGGGGGGGTCCCTGTTTCCCCACACTTGGAATCCCATACCCCCAAGGCTGACCCAAGGTGGTCTCACCTGCAACAGCTTGGTGAGGAGGTCGGCCCCGTCGCTATCAAGTCTGCCACAAGGACAAAGAGACCTGATTTAAAATGAGTTTGGACACTCTGGCCCCTAACGCCCACCCACCCACCAGCCTCACCGGGGTGCGTGGCTCAAAAGGGCCTCGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:47227072|47227469 hsa-miR-494-5p 0 0 1
chrX:47227072|47227469 hsa-miR-494-3p 0 0 1
chrX:47227072|47227469 hsa-miR-585-5p 0 0 1
chrX:47227072|47227469 hsa-miR-585-3p 0 0 1
chrX:47227072|47227469 hsa-miR-595 0 0 1
chrX:47227072|47227469 hsa-miR-622 0 0 1
chrX:47227072|47227469 hsa-miR-625-5p 0 0 1
chrX:47227072|47227469 hsa-miR-625-3p 0 0 1
chrX:47227072|47227469 hsa-miR-637 1 0 1
chrX:47227072|47227469 hsa-miR-653-5p 0 0 1
chrX:47227072|47227469 hsa-miR-653-3p 0 0 1
chrX:47227072|47227469 hsa-miR-657 0 0 1
chrX:47227072|47227469 hsa-miR-541-5p 0 0 1
chrX:47227072|47227469 hsa-miR-541-3p 0 0 1
chrX:47227072|47227469 hsa-miR-939-5p 0 0 1
chrX:47227072|47227469 hsa-miR-939-3p 0 0 1
chrX:47227072|47227469 hsa-miR-1182 0 1 1
chrX:47227072|47227469 hsa-miR-1200 0 0 1
chrX:47227072|47227469 hsa-miR-1293 0 0 1
chrX:47227072|47227469 hsa-miR-1304-5p 0 0 1
chrX:47227072|47227469 hsa-miR-1304-3p 0 0 1
chrX:47227072|47227469 hsa-miR-1275 0 1 1
chrX:47227072|47227469 hsa-miR-125a-3p 1 1 1
chrX:47227072|47227469 hsa-miR-769-5p 0 0 1
chrX:47227072|47227469 hsa-miR-127-3p 0 1 1
chrX:47227072|47227469 hsa-miR-491-5p 0 0 1
chrX:47227072|47227469 hsa-miR-486-3p 0 0 1
chrX:47227072|47227469 hsa-miR-485-5p 0 0 1
chrX:47227072|47227469 hsa-miR-654-5p 0 1 1
chrX:47227072|47227469 hsa-miR-1207-5p 0 1 1
chrX:47227072|47227469 hsa-miR-371-5p 0 0 1
chrX:47227072|47227469 hsa-miR-138 0 0 1
chrX:47227072|47227469 hsa-miR-1268 0 0 1
chrX:47227072|47227469 hsa-miR-608 1 1 0
chrX:47227072|47227469 hsa-miR-762 1 0 0
chrX:47227072|47227469 hsa-miR-759 0 1 0
chrX:47227072|47227469 hsa-miR-933 1 1 0
chrX:47227072|47227469 hsa-miR-940 1 0 0
chrX:47227072|47227469 hsa-miR-1268a 1 0 0
chrX:47227072|47227469 hsa-miR-2110 0 1 0
chrX:47227072|47227469 hsa-miR-2861 1 0 0
chrX:47227072|47227469 hsa-miR-4316 0 1 0
chrX:47227072|47227469 hsa-miR-4261 0 1 0
chrX:47227072|47227469 hsa-miR-3652 1 0 0
chrX:47227072|47227469 hsa-miR-1268b 1 0 0
chrX:47227072|47227469 hsa-miR-4498 1 0 0
chrX:47227072|47227469 hsa-miR-4507 1 0 0
chrX:47227072|47227469 hsa-miR-1587 1 0 0
chrX:47227072|47227469 hsa-miR-4651 1 0 0
chrX:47227072|47227469 hsa-miR-4656 1 0 0
chrX:47227072|47227469 hsa-miR-4688 0 1 0
chrX:47227072|47227469 hsa-miR-4710 0 1 0
chrX:47227072|47227469 hsa-miR-5193 0 1 0
chrX:47227072|47227469 hsa-miR-5572 1 0 0
chrX:47227072|47227469 hsa-miR-5787 1 0 0
chrX:47227072|47227469 hsa-miR-6085 1 0 0
chrX:47227072|47227469 hsa-miR-6086 1 0 0
chrX:47227072|47227469 hsa-miR-8055 0 1 0
chrX:47227072|47227469 hsa-miR-9898 1 0 0
chrX:47227072|47227469 hsa-miR-11399 1 0 0
chrX:47227072|47227469 hsa-miR-12119 0 1 0
chrX:47227072|47227469 hsa-miR-128-1-5p 0 1 0
chrX:47227072|47227469 hsa-miR-4731-5p 1 0 0
chrX:47227072|47227469 hsa-miR-1273h-3p 1 0 0
chrX:47227072|47227469 hsa-miR-4433a-3p 1 0 0
chrX:47227072|47227469 hsa-miR-6765-5p 1 0 0
chrX:47227072|47227469 hsa-miR-4687-3p 1 0 0
chrX:47227072|47227469 hsa-miR-6892-3p 0 1 0
chrX:47227072|47227469 hsa-miR-6728-5p 1 0 0
chrX:47227072|47227469 hsa-miR-3934-5p 0 1 0
chrX:47227072|47227469 hsa-miR-6089 1 0 0
chrX:47227072|47227469 hsa-miR-296-5p 0 1 0
chrX:47227072|47227469 hsa-miR-6875-3p 0 1 0
chrX:47227072|47227469 hsa-miR-6741-5p 1 0 0
chrX:47227072|47227469 hsa-miR-3622b-5p 1 0 0
chrX:47227072|47227469 hsa-miR-6759-5p 1 0 0
chrX:47227072|47227469 hsa-miR-6721-5p 0 1 0
chrX:47227072|47227469 hsa-miR-6871-5p 1 0 0
chrX:47227072|47227469 hsa-miR-1292-5p 1 0 0
chrX:47227072|47227469 hsa-miR-3180-3p 1 0 0
chrX:47227072|47227469 hsa-miR-6748-5p 1 1 0
chrX:47227072|47227469 hsa-miR-6793-5p 1 0 0
chrX:47227072|47227469 hsa-miR-2467-5p 0 1 0
chrX:47227072|47227469 hsa-miR-23a-5p 1 0 0
chrX:47227072|47227469 hsa-miR-4753-3p 0 1 0
chrX:47227072|47227469 hsa-miR-6782-5p 1 0 0
chrX:47227072|47227469 hsa-miR-6715b-3p 0 1 0
chrX:47227072|47227469 hsa-miR-5008-5p 0 1 0
chrX:47227072|47227469 hsa-miR-6786-5p 1 1 0
chrX:47227072|47227469 hsa-miR-7109-5p 1 0 0
chrX:47227072|47227469 hsa-miR-1229-5p 1 1 0
chrX:47227072|47227469 hsa-miR-4640-5p 0 1 0
chrX:47227072|47227469 hsa-miR-6753-5p 0 1 0
chrX:47227072|47227469 hsa-miR-7113-3p 0 1 0
chrX:47227072|47227469 hsa-miR-1228-5p 1 0 0
chrX:47227072|47227469 hsa-miR-6847-5p 0 1 0
chrX:47227072|47227469 hsa-miR-4667-3p 0 1 0
chrX:47227072|47227469 hsa-miR-4446-3p 1 0 0
chrX:47227072|47227469 hsa-miR-6802-5p 1 0 0
chrX:47227072|47227469 hsa-miR-6781-5p 1 0 0
chrX:47227072|47227469 hsa-miR-7162-3p 0 1 0
chrX:47227072|47227469 hsa-miR-3189-3p 1 1 0
chrX:47227072|47227469 hsa-miR-6887-3p 0 1 0
chrX:47227072|47227469 hsa-miR-2355-3p 0 1 0
chrX:47227072|47227469 hsa-miR-5089-5p 0 1 0
chrX:47227072|47227469 hsa-miR-6851-3p 0 1 0
chrX:47227072|47227469 hsa-miR-6734-3p 0 1 0
chrX:47227072|47227469 hsa-miR-499b-5p 0 1 0
chrX:47227072|47227469 hsa-miR-1233-5p 1 0 0
chrX:47227072|47227469 hsa-miR-4763-3p 0 1 0
chrX:47227072|47227469 hsa-miR-6769b-5p 1 1 0
chrX:47227072|47227469 hsa-miR-6816-5p 1 0 0
chrX:47227072|47227469 hsa-miR-6865-5p 1 0 0
chrX:47227072|47227469 hsa-miR-6893-5p 1 0 0
chrX:47227072|47227469 hsa-miR-1343-5p 0 1 0
chrX:47227072|47227469 hsa-miR-6743-5p 0 1 0
chrX:47227072|47227469 hsa-miR-6752-5p 1 0 0
chrX:47227072|47227469 hsa-miR-6756-5p 1 1 0
chrX:47227072|47227469 hsa-miR-6769a-5p 1 1 0
chrX:47227072|47227469 hsa-miR-6803-5p 1 1 0
chrX:47227072|47227469 hsa-miR-6813-5p 1 1 0
chrX:47227072|47227469 hsa-miR-6851-5p 1 0 0
chrX:47227072|47227469 hsa-miR-7110-5p 1 0 0
chrX:47227072|47227469 hsa-miR-10401-5p 1 1 0
chrX:47227072|47227469 hsa-miR-6751-5p 1 1 0
chrX:47227072|47227469 hsa-miR-6774-5p 1 0 0
chrX:47227072|47227469 hsa-miR-6879-5p 1 0 0
chrX:47227072|47227469 hsa-miR-7111-5p 0 1 0
chrX:47227072|47227469 hsa-miR-3620-5p 1 0 0
chrX:47227072|47227469 hsa-miR-1237-5p 1 0 0
chrX:47227072|47227469 hsa-miR-328-5p 1 0 0
chrX:47227072|47227469 hsa-miR-4701-3p 1 0 0
chrX:47227072|47227469 hsa-miR-4726-5p 1 1 0
chrX:47227072|47227469 hsa-miR-6846-5p 1 0 0
chrX:47227072|47227469 hsa-miR-6848-5p 1 0 0
chrX:47227072|47227469 hsa-miR-6845-5p 1 1 0
chrX:47227072|47227469 hsa-miR-4758-5p 1 0 0
chrX:47227072|47227469 hsa-miR-4665-5p 1 1 0
chrX:47227072|47227469 hsa-miR-6855-5p 1 0 0
chrX:47227072|47227469 hsa-miR-6766-5p 0 1 0
chrX:47227072|47227469 hsa-miR-3184-5p 1 0 0
chrX:47227072|47227469 hsa-miR-6762-5p 0 1 0
chrX:47227072|47227469 hsa-miR-6884-5p 0 1 0
chrX:47227072|47227469 hsa-miR-128-2-5p 0 1 0
chrX:47227072|47227469 hsa-miR-371a-5p 0 1 0
chrX:47227072|47227469 hsa-miR-181d-5p 0 1 0
chrX:47227072|47227469 hsa-miR-664a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:47227072|47227469
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MDVSWHPLRRSDFDPQTEWGCGEGDSIDIFNK
Nucleotide Sequence ATGGATGTTTCATGGCATCCTCTGCGGAGATCCGATTTCGACCCTCAAACTGAGTGGGGGTGCGGGGAGGGGGATAGTATTGATATCTTCAACAAGTAG
CircID chrX:47227072|47227469
ORF Type ORF2
Protein Length 58
Nucleotide Length 177
Protein Sequence MPTSDPAPGLRGGVPVSPHLESHTPKADPRWSHLQQLGEEVGPVAIKSATRTKRPDLK
Nucleotide Sequence CTGCCCACCTCAGACCCTGCCCCTGGTTTGAGGGGGGGGGTCCCTGTTTCCCCACACTTGGAATCCCATACCCCCAAGGCTGACCCAAGGTGGTCTCACCTGCAACAGCTTGGTGAGGAGGTCGGCCCCGTCGCTATCAAGTCTGCCACAAGGACAAAGAGACCTGATTTAAAATGA
CircID chrX:47227072|47227469
ORF Type ORF3
Protein Length 43
Nucleotide Length 132
Protein Sequence MFHGILCGDPISTLKLSGGAGRGIVLISSTSRSLCPPQTLPLV
Nucleotide Sequence ATGTTTCATGGCATCCTCTGCGGAGATCCGATTTCGACCCTCAAACTGAGTGGGGGTGCGGGGAGGGGGATAGTATTGATATCTTCAACAAGTAGGTCTCTCTGCCCACCTCAGACCCTGCCCCTGGTTTGA
CircID chrX:47227072|47227469
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence MFPHTWNPIPPRLTQGGLTCNSLVRRSAPSLSSLPQGQRDLI
Nucleotide Sequence CTGTTTCCCCACACTTGGAATCCCATACCCCCAAGGCTGACCCAAGGTGGTCTCACCTGCAACAGCTTGGTGAGGAGGTCGGCCCCGTCGCTATCAAGTCTGCCACAAGGACAAAGAGACCTGATTTAA
CircID chrX:47227072|47227469
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MWIRSPRLRKNGCFMASSAEIRFRPSN
Nucleotide Sequence TTGTGGATCCGCTCCCCCAGACTGAGGAAGAATGGATGTTTCATGGCATCCTCTGCGGAGATCCGATTTCGACCCTCAAACTGA
CircID chrX:47227072|47227469
ORF Type ORF6
Protein Length 26
Nucleotide Length 78
Protein Sequence MSLDTLAPNAHPPTSLTGVRGSKGPR
Nucleotide Sequence ATGAGTTTGGACACTCTGGCCCCTAACGCCCACCCACCCACCAGCCTCACCGGGGTGCGTGGCTCAAAAGGGCCTCGG
CircID chrX:47227072|47227469
ORF Type ORF7
Protein Length 45
Nucleotide Length 138
Protein Sequence MGVWDSKCGETGTPPLKPGAGSEVGRETYLLKISILSPSPHPHSV
Nucleotide Sequence TTGGGGGTATGGGATTCCAAGTGTGGGGAAACAGGGACCCCCCCCCTCAAACCAGGGGCAGGGTCTGAGGTGGGCAGAGAGACCTACTTGTTGAAGATATCAATACTATCCCCCTCCCCGCACCCCCACTCAGTTTGA
CircID chrX:47227072|47227469
ORF Type ORF8
Protein Length 26
Nucleotide Length 81
Protein Sequence MVGGWALGARVSKLILNQVSLSLWQT
Nucleotide Sequence CTGGTGGGTGGGTGGGCGTTAGGGGCCAGAGTGTCCAAACTCATTTTAAATCAGGTCTCTTTGTCCTTGTGGCAGACTTGA
CircID chrX:47227072|47227469
ORF Type ORF9
Protein Length 34
Nucleotide Length 105
Protein Sequence MGQPWGYGIPSVGKQGPPPSNQGQGLRWAERPTC
Nucleotide Sequence TTGGGTCAGCCTTGGGGGTATGGGATTCCAAGTGTGGGGAAACAGGGACCCCCCCCCTCAAACCAGGGGCAGGGTCTGAGGTGGGCAGAGAGACCTACTTGTTGA
CircID chrX:47227072|47227469
ORF Type ORF10
Protein Length 32
Nucleotide Length 99
Protein Sequence MLQVRPPWVSLGGMGFQVWGNRDPPPQTRGRV
Nucleotide Sequence CTGTTGCAGGTGAGACCACCTTGGGTCAGCCTTGGGGGTATGGGATTCCAAGTGTGGGGAAACAGGGACCCCCCCCCTCAAACCAGGGGCAGGGTCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab