CircRNA Information

General Information
circRNA Basic Information
CircID chrX:47571631|47571760
Strand -
CircType exon
Host Gene ENSG00000078061.11;
Algorism CIRI2;
Sequence CCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACTCAGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:47571631|47571760 hsa-miR-150-5p 0 0 1
chrX:47571631|47571760 hsa-miR-150-3p 0 0 1
chrX:47571631|47571760 hsa-miR-605-5p 0 0 1
chrX:47571631|47571760 hsa-miR-605-3p 0 0 1
chrX:47571631|47571760 hsa-miR-620 0 0 1
chrX:47571631|47571760 hsa-miR-622 0 0 1
chrX:47571631|47571760 hsa-miR-765 1 1 1
chrX:47571631|47571760 hsa-miR-708-5p 0 0 1
chrX:47571631|47571760 hsa-miR-708-3p 0 0 1
chrX:47571631|47571760 hsa-miR-1270 0 1 1
chrX:47571631|47571760 hsa-miR-28-5p 0 1 1
chrX:47571631|47571760 hsa-miR-9 0 0 1
chrX:47571631|47571760 hsa-miR-24 0 0 1
chrX:47571631|47571760 hsa-miR-663 0 0 1
chrX:47571631|47571760 hsa-miR-198 1 0 0
chrX:47571631|47571760 hsa-miR-637 1 0 0
chrX:47571631|47571760 hsa-miR-650 0 1 0
chrX:47571631|47571760 hsa-miR-1275 1 0 0
chrX:47571631|47571760 hsa-miR-3125 1 1 0
chrX:47571631|47571760 hsa-miR-3139 0 1 0
chrX:47571631|47571760 hsa-miR-3916 0 1 0
chrX:47571631|47571760 hsa-miR-4488 1 0 0
chrX:47571631|47571760 hsa-miR-4496 0 1 0
chrX:47571631|47571760 hsa-miR-4534 1 1 0
chrX:47571631|47571760 hsa-miR-4658 1 0 0
chrX:47571631|47571760 hsa-miR-4689 1 0 0
chrX:47571631|47571760 hsa-miR-4730 1 0 0
chrX:47571631|47571760 hsa-miR-4739 1 0 0
chrX:47571631|47571760 hsa-miR-4784 0 1 0
chrX:47571631|47571760 hsa-miR-6133 1 0 0
chrX:47571631|47571760 hsa-miR-7150 1 0 0
chrX:47571631|47571760 hsa-miR-7977 0 1 0
chrX:47571631|47571760 hsa-miR-8077 1 0 0
chrX:47571631|47571760 hsa-miR-12118 1 0 0
chrX:47571631|47571760 hsa-miR-12131 0 1 0
chrX:47571631|47571760 hsa-miR-671-5p 1 0 0
chrX:47571631|47571760 hsa-miR-7106-5p 1 0 0
chrX:47571631|47571760 hsa-miR-6894-5p 1 0 0
chrX:47571631|47571760 hsa-miR-25-5p 1 0 0
chrX:47571631|47571760 hsa-miR-766-5p 1 0 0
chrX:47571631|47571760 hsa-miR-3622a-5p 1 0 0
chrX:47571631|47571760 hsa-miR-6089 1 0 0
chrX:47571631|47571760 hsa-miR-6873-5p 1 0 0
chrX:47571631|47571760 hsa-miR-6880-5p 1 0 0
chrX:47571631|47571760 hsa-miR-7847-3p 1 0 0
chrX:47571631|47571760 hsa-miR-4695-5p 1 1 0
chrX:47571631|47571760 hsa-miR-4753-5p 0 1 0
chrX:47571631|47571760 hsa-miR-7845-5p 1 0 0
chrX:47571631|47571760 hsa-miR-6732-5p 1 0 0
chrX:47571631|47571760 hsa-miR-6805-5p 0 1 0
chrX:47571631|47571760 hsa-miR-6810-5p 1 0 0
chrX:47571631|47571760 hsa-miR-4786-3p 1 0 0
chrX:47571631|47571760 hsa-miR-4640-5p 1 0 0
chrX:47571631|47571760 hsa-miR-1908-5p 1 0 0
chrX:47571631|47571760 hsa-miR-877-5p 1 0 0
chrX:47571631|47571760 hsa-miR-6824-5p 1 0 0
chrX:47571631|47571760 hsa-miR-423-5p 1 0 0
chrX:47571631|47571760 hsa-miR-6752-3p 0 1 0
chrX:47571631|47571760 hsa-miR-551b-5p 0 1 0
chrX:47571631|47571760 hsa-miR-4283 0 1 0
chrX:47571631|47571760 hsa-miR-449b-3p 0 1 0
chrX:47571631|47571760 hsa-miR-1207-5p 1 0 0
chrX:47571631|47571760 hsa-miR-4763-3p 1 0 0
chrX:47571631|47571760 hsa-miR-6870-5p 1 1 0
chrX:47571631|47571760 hsa-miR-1343-5p 1 0 0
chrX:47571631|47571760 hsa-miR-6803-5p 1 0 0
chrX:47571631|47571760 hsa-miR-11181-3p 1 0 0
chrX:47571631|47571760 hsa-miR-1249-5p 1 0 0
chrX:47571631|47571760 hsa-miR-6722-3p 1 0 0
chrX:47571631|47571760 hsa-miR-6797-5p 1 0 0
chrX:47571631|47571760 hsa-miR-7111-5p 1 0 0
chrX:47571631|47571760 hsa-miR-4728-5p 1 0 0
chrX:47571631|47571760 hsa-miR-10396a-5p 1 0 0
chrX:47571631|47571760 hsa-miR-10396b-5p 1 0 0
chrX:47571631|47571760 hsa-miR-10526-3p 1 0 0
chrX:47571631|47571760 hsa-miR-328-5p 1 0 0
chrX:47571631|47571760 hsa-miR-4749-5p 1 0 0
chrX:47571631|47571760 hsa-miR-6846-5p 1 0 0
chrX:47571631|47571760 hsa-miR-6848-5p 1 0 0
chrX:47571631|47571760 hsa-miR-4697-5p 1 0 0
chrX:47571631|47571760 hsa-miR-939-5p 1 0 0
chrX:47571631|47571760 hsa-miR-1238-5p 0 1 0
chrX:47571631|47571760 hsa-miR-4758-5p 1 1 0
chrX:47571631|47571760 hsa-miR-3173-3p 1 0 0
chrX:47571631|47571760 hsa-miR-3184-5p 1 0 0
chrX:47571631|47571760 hsa-miR-6822-5p 1 0 0
chrX:47571631|47571760 hsa-miR-4722-3p 0 1 0
chrX:47571631|47571760 hsa-miR-10400-3p 1 0 0
chrX:47571631|47571760 hsa-miR-6859-5p 1 0 0
chrX:47571631|47571760 hsa-miR-7-2-3p 0 1 0
chrX:47571631|47571760 hsa-miR-561-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:47571631|47571760
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MSPLSPPSFGFLLALGILLNFGSSSISNGWDLWQGFHSE
Nucleotide Sequence CTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACTCAGAA
CircID chrX:47571631|47571760
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MSGIPATNPSHWRWRSSQNLEVSPKPRGNQMMEETGGSVFGG
Nucleotide Sequence CTGAGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGG
CircID chrX:47571631|47571760
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MEMEELPKFRSIPKAKRKPNDGGDRGLSLWR
Nucleotide Sequence TTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab