CircRNA Information

General Information
circRNA Basic Information
CircID chrX:47585274|47585646
Strand +
CircType exon
Host Gene ENSG00000102265.10;
Algorism CIRI2;
Sequence AGTGTAGGTCTTGGTGAAGCCCCGGCGCTGAGCTAAGCTCAGGCTGTTCCAGGGAGCCACAAAACTGCAGGTAGTGATGTGCAAGAGTCCATCCTGCAGTTTTCCTAAGGAGAAAGGCGGGGCGGGGACCGACAAGCAGCTTGTGATTGGCTGAGCTGCCAAGCTGCCAAAGGCCCGGCCTTCTGATAGACTGAAATTGGGGTGGTCCCCATTTCCAGTGGGACCATTCCCATCAGAGCCTCGCCCCCTCGTGGTTGCTAGGCCGCGCCCCAGGGACTGGTTGGTGTGGCACAGGGCGCGGGGACGGTGCCTCACCAGCAATGAGAAACTCCTCGCTGCGGTTGTGGGACCTGTGGAAGTATCCGCAGACACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:47585274|47585646 hsa-miR-96-5p 0 0 1
chrX:47585274|47585646 hsa-miR-96-3p 0 0 1
chrX:47585274|47585646 hsa-miR-197-5p 0 0 1
chrX:47585274|47585646 hsa-miR-197-3p 0 0 1
chrX:47585274|47585646 hsa-miR-182-5p 0 0 1
chrX:47585274|47585646 hsa-miR-182-3p 0 0 1
chrX:47585274|47585646 hsa-miR-346 0 0 1
chrX:47585274|47585646 hsa-miR-412-5p 0 0 1
chrX:47585274|47585646 hsa-miR-412-3p 0 0 1
chrX:47585274|47585646 hsa-miR-622 0 0 1
chrX:47585274|47585646 hsa-miR-632 0 0 1
chrX:47585274|47585646 hsa-miR-1271-5p 0 0 1
chrX:47585274|47585646 hsa-miR-1271-3p 0 0 1
chrX:47585274|47585646 hsa-miR-760 0 0 1
chrX:47585274|47585646 hsa-miR-1227-5p 0 0 1
chrX:47585274|47585646 hsa-miR-1227-3p 0 0 1
chrX:47585274|47585646 hsa-miR-1205 0 1 1
chrX:47585274|47585646 hsa-miR-548e-5p 0 0 1
chrX:47585274|47585646 hsa-miR-548e-3p 0 0 1
chrX:47585274|47585646 hsa-miR-1286 0 0 1
chrX:47585274|47585646 hsa-miR-513b-5p 0 0 1
chrX:47585274|47585646 hsa-miR-513b-3p 0 0 1
chrX:47585274|47585646 hsa-miR-1827 0 0 1
chrX:47585274|47585646 hsa-miR-885-3p 0 0 1
chrX:47585274|47585646 hsa-miR-361-5p 0 0 1
chrX:47585274|47585646 hsa-miR-146b-3p 0 0 1
chrX:47585274|47585646 hsa-miR-188-3p 0 1 1
chrX:47585274|47585646 hsa-miR-875-3p 0 0 1
chrX:47585274|47585646 hsa-miR-34c-3p 0 0 1
chrX:47585274|47585646 hsa-miR-509-3-5p 0 0 1
chrX:47585274|47585646 hsa-miR-509-5p 0 0 1
chrX:47585274|47585646 hsa-miR-548a-3p 0 0 1
chrX:47585274|47585646 hsa-miR-151-5p 0 0 1
chrX:47585274|47585646 hsa-miR-138 0 0 1
chrX:47585274|47585646 hsa-miR-548f 0 0 1
chrX:47585274|47585646 hsa-miR-499-3p 0 0 1
chrX:47585274|47585646 hsa-miR-636 0 1 0
chrX:47585274|47585646 hsa-miR-661 0 1 0
chrX:47585274|47585646 hsa-miR-663a 1 0 0
chrX:47585274|47585646 hsa-miR-665 1 0 0
chrX:47585274|47585646 hsa-miR-3178 0 1 0
chrX:47585274|47585646 hsa-miR-4292 0 1 0
chrX:47585274|47585646 hsa-miR-1268b 1 0 0
chrX:47585274|47585646 hsa-miR-4418 0 1 0
chrX:47585274|47585646 hsa-miR-4449 1 0 0
chrX:47585274|47585646 hsa-miR-4488 0 1 0
chrX:47585274|47585646 hsa-miR-4538 0 1 0
chrX:47585274|47585646 hsa-miR-4706 1 0 0
chrX:47585274|47585646 hsa-miR-4739 1 0 0
chrX:47585274|47585646 hsa-miR-6081 1 0 0
chrX:47585274|47585646 hsa-miR-9900 0 1 0
chrX:47585274|47585646 hsa-miR-3692-3p 0 1 0
chrX:47585274|47585646 hsa-miR-6854-5p 0 1 0
chrX:47585274|47585646 hsa-miR-6089 1 0 0
chrX:47585274|47585646 hsa-miR-4755-3p 0 1 0
chrX:47585274|47585646 hsa-miR-6762-3p 0 1 0
chrX:47585274|47585646 hsa-miR-27b-5p 0 1 0
chrX:47585274|47585646 hsa-miR-6716-5p 0 1 0
chrX:47585274|47585646 hsa-miR-6805-5p 0 1 0
chrX:47585274|47585646 hsa-miR-2467-5p 0 1 0
chrX:47585274|47585646 hsa-miR-7855-5p 0 1 0
chrX:47585274|47585646 hsa-miR-6784-5p 0 1 0
chrX:47585274|47585646 hsa-miR-7113-3p 1 1 0
chrX:47585274|47585646 hsa-miR-7106-3p 0 1 0
chrX:47585274|47585646 hsa-miR-1914-5p 0 1 0
chrX:47585274|47585646 hsa-miR-5589-3p 1 0 0
chrX:47585274|47585646 hsa-miR-3173-5p 1 1 0
chrX:47585274|47585646 hsa-miR-548av-3p 0 1 0
chrX:47585274|47585646 hsa-miR-6816-5p 1 0 0
chrX:47585274|47585646 hsa-miR-1343-5p 1 0 0
chrX:47585274|47585646 hsa-miR-6756-5p 1 0 0
chrX:47585274|47585646 hsa-miR-6751-5p 1 0 0
chrX:47585274|47585646 hsa-miR-6754-3p 0 1 0
chrX:47585274|47585646 hsa-miR-1237-5p 0 1 0
chrX:47585274|47585646 hsa-miR-4649-5p 0 1 0
chrX:47585274|47585646 hsa-miR-4697-5p 0 1 0
chrX:47585274|47585646 hsa-miR-10394-3p 0 1 0
chrX:47585274|47585646 hsa-miR-6791-5p 1 1 0
chrX:47585274|47585646 hsa-miR-10392-3p 1 0 0
chrX:47585274|47585646 hsa-miR-32-5p 1 1 0
chrX:47585274|47585646 hsa-miR-4659b-3p 0 1 0
chrX:47585274|47585646 hsa-miR-3064-3p 0 1 0
chrX:47585274|47585646 hsa-miR-4999-3p 0 1 0
chrX:47585274|47585646 hsa-miR-548ar-3p 0 1 0
chrX:47585274|47585646 hsa-miR-548az-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:47585274|47585646
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MFQGATKLQVVMCKSPSCSFPKEKGGAGTDKQLVIG
Nucleotide Sequence CTGTTCCAGGGAGCCACAAAACTGCAGGTAGTGATGTGCAAGAGTCCATCCTGCAGTTTTCCTAAGGAGAAAGGCGGGGCGGGGACCGACAAGCAGCTTGTGATTGGCTGA
CircID chrX:47585274|47585646
ORF Type ORF2
Protein Length 70
Nucleotide Length 210
Protein Sequence MPKARPSDRLKLGWSPFPVGPFPSEPRPLVVARPRPRDWLVWHRARGRCLTSNEKLLAAVVGPVEVSADT
Nucleotide Sequence CTGCCAAAGGCCCGGCCTTCTGATAGACTGAAATTGGGGTGGTCCCCATTTCCAGTGGGACCATTCCCATCAGAGCCTCGCCCCCTCGTGGTTGCTAGGCCGCGCCCCAGGGACTGGTTGGTGTGGCACAGGGCGCGGGGACGGTGCCTCACCAGCAATGAGAAACTCCTCGCTGCGGTTGTGGGACCTGTGGAAGTATCCGCAGACACT
CircID chrX:47585274|47585646
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MLGRAPGTGWCGTGRGDGASPAMRNSSLRLWDLWKYPQT
Nucleotide Sequence TTGCTAGGCCGCGCCCCAGGGACTGGTTGGTGTGGCACAGGGCGCGGGGACGGTGCCTCACCAGCAATGAGAAACTCCTCGCTGCGGTTGTGGGACCTGTGGAAGTATCCGCAGACA
CircID chrX:47585274|47585646
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MLVGPRPAFLLRKTAGWTLAHHYLQFCGSLEQPELSSAPGLHQDLH
Nucleotide Sequence CTGCTTGTCGGTCCCCGCCCCGCCTTTCTCCTTAGGAAAACTGCAGGATGGACTCTTGCACATCACTACCTGCAGTTTTGTGGCTCCCTGGAACAGCCTGAGCTTAGCTCAGCGCCGGGGCTTCACCAAGACCTACAC
CircID chrX:47585274|47585646
ORF Type ORF5
Protein Length 107
Nucleotide Length 321
Protein Sequence MLVRHRPRALCHTNQSLGRGLATTRGRGSDGNGPTGNGDHPNFSLSEGRAFGSLAAQPITSCLSVPAPPFSLGKLQDGLLHITTCSFVAPWNSLSLAQRRGFTKTYT
Nucleotide Sequence TTGCTGGTGAGGCACCGTCCCCGCGCCCTGTGCCACACCAACCAGTCCCTGGGGCGCGGCCTAGCAACCACGAGGGGGCGAGGCTCTGATGGGAATGGTCCCACTGGAAATGGGGACCACCCCAATTTCAGTCTATCAGAAGGCCGGGCCTTTGGCAGCTTGGCAGCTCAGCCAATCACAAGCTGCTTGTCGGTCCCCGCCCCGCCTTTCTCCTTAGGAAAACTGCAGGATGGACTCTTGCACATCACTACCTGCAGTTTTGTGGCTCCCTGGAACAGCCTGAGCTTAGCTCAGCGCCGGGGCTTCACCAAGACCTACACT
CircID chrX:47585274|47585646
ORF Type ORF6
Protein Length 43
Nucleotide Length 132
Protein Sequence MMGMVPLEMGTTPISVYQKAGPLAAWQLSQSQAACRSPPRLSP
Nucleotide Sequence CTGATGGGAATGGTCCCACTGGAAATGGGGACCACCCCAATTTCAGTCTATCAGAAGGCCGGGCCTTTGGCAGCTTGGCAGCTCAGCCAATCACAAGCTGCTTGTCGGTCCCCGCCCCGCCTTTCTCCTTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab