CircRNA Information

General Information
circRNA Basic Information
CircID chrX:47586521|47586724
Strand +
CircType exon
Host Gene ENSG00000102265.10;
Algorism CIRI2;
Sequence TGTGCAGGCTTCAGCTTCCACTCCGGGCAGGATTCAGGCTATCTGGGACCGCAGGGACTGCCAGGTGCACAGCCCTGGCTCCCGAGGCAGGCAGGCAAGGTGACGGGACTGGAAGCCCTTTTCAGAGCCTTGGAGGAGCTGGTCCGTCCACAAGCAATGAGTGCCACTCTGCAGTTTGCAGGGGATGGATAAACAGGGAAACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:47586521|47586724 hsa-miR-34a-5p 0 0 1
chrX:47586521|47586724 hsa-miR-34a-3p 0 0 1
chrX:47586521|47586724 hsa-miR-184 0 0 1
chrX:47586521|47586724 hsa-miR-449a 0 0 1
chrX:47586521|47586724 hsa-miR-596 0 0 1
chrX:47586521|47586724 hsa-miR-449b-5p 0 0 1
chrX:47586521|47586724 hsa-miR-449b-3p 0 0 1
chrX:47586521|47586724 hsa-miR-760 0 0 1
chrX:47586521|47586724 hsa-miR-1247-5p 0 0 1
chrX:47586521|47586724 hsa-miR-1247-3p 0 0 1
chrX:47586521|47586724 hsa-miR-671-5p 0 0 1
chrX:47586521|47586724 hsa-miR-145-5p 0 0 1
chrX:47586521|47586724 hsa-miR-339-5p 0 0 1
chrX:47586521|47586724 hsa-miR-331-3p 0 0 1
chrX:47586521|47586724 hsa-miR-34c-5p 0 0 1
chrX:47586521|47586724 hsa-miR-509-3-5p 1 1 1
chrX:47586521|47586724 hsa-miR-509-5p 0 1 1
chrX:47586521|47586724 hsa-miR-1274a 0 0 1
chrX:47586521|47586724 hsa-miR-1274b 0 0 1
chrX:47586521|47586724 hsa-miR-759 0 1 0
chrX:47586521|47586724 hsa-miR-1539 1 0 0
chrX:47586521|47586724 hsa-miR-3909 1 0 0
chrX:47586521|47586724 hsa-miR-370-3p 1 0 0
chrX:47586521|47586724 hsa-miR-6747-3p 0 1 0
chrX:47586521|47586724 hsa-miR-505-5p 0 1 0
chrX:47586521|47586724 hsa-miR-1915-5p 1 1 0
chrX:47586521|47586724 hsa-miR-3180-3p 1 0 0
chrX:47586521|47586724 hsa-miR-3190-3p 0 1 0
chrX:47586521|47586724 hsa-miR-6827-5p 0 1 0
chrX:47586521|47586724 hsa-miR-6765-3p 0 1 0
chrX:47586521|47586724 hsa-miR-4436b-5p 1 0 0
chrX:47586521|47586724 hsa-miR-615-5p 1 0 0
chrX:47586521|47586724 hsa-miR-5187-3p 0 1 0
chrX:47586521|47586724 hsa-miR-6894-3p 0 1 0
chrX:47586521|47586724 hsa-miR-4446-5p 0 1 0
chrX:47586521|47586724 hsa-miR-4446-3p 0 1 0
chrX:47586521|47586724 hsa-miR-6736-3p 0 1 0
chrX:47586521|47586724 hsa-miR-146b-3p 1 0 0
chrX:47586521|47586724 hsa-miR-3158-5p 0 1 0
chrX:47586521|47586724 hsa-miR-3158-3p 0 1 0
chrX:47586521|47586724 hsa-miR-1910-5p 1 0 0
chrX:47586521|47586724 hsa-miR-7151-5p 0 1 0
chrX:47586521|47586724 hsa-miR-891a-3p 0 1 0
chrX:47586521|47586724 hsa-miR-4746-5p 1 1 0
chrX:47586521|47586724 hsa-miR-188-5p 0 1 0
chrX:47586521|47586724 hsa-miR-4797-5p 0 1 0
chrX:47586521|47586724 hsa-miR-500a-3p 0 1 0
chrX:47586521|47586724 hsa-miR-4652-3p 0 1 0
chrX:47586521|47586724 hsa-miR-6726-5p 0 1 0
chrX:47586521|47586724 hsa-miR-4685-5p 1 1 0
chrX:47586521|47586724 hsa-miR-10398-3p 1 1 0
chrX:47586521|47586724 hsa-miR-6792-3p 0 1 0
chrX:47586521|47586724 hsa-miR-4691-5p 0 1 0
chrX:47586521|47586724 hsa-miR-5195-3p 1 0 0
chrX:47586521|47586724 hsa-miR-1912-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chrX:47586521|47586724
ORF Type ORF1
Protein Length 49
Nucleotide Length 150
Protein Sequence MGPQGLPGAQPWLPRQAGKVTGLEALFRALEELVRPQAMSATLQFAGDG
Nucleotide Sequence CTGGGACCGCAGGGACTGCCAGGTGCACAGCCCTGGCTCCCGAGGCAGGCAGGCAAGGTGACGGGACTGGAAGCCCTTTTCAGAGCCTTGGAGGAGCTGGTCCGTCCACAAGCAATGAGTGCCACTCTGCAGTTTGCAGGGGATGGATAA

CircID chrX:47586521|47586724
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MAPEAGRQGDGTGSPFQSLGGAGPSTSNECHSAVCRGWINRET
Nucleotide Sequence CTGGCTCCCGAGGCAGGCAGGCAAGGTGACGGGACTGGAAGCCCTTTTCAGAGCCTTGGAGGAGCTGGTCCGTCCACAAGCAATGAGTGCCACTCTGCAGTTTGCAGGGGATGGATAAACAGGGAAACA

CircID chrX:47586521|47586724
ORF Type ORF3
Protein Length 46
Nucleotide Length 141
Protein Sequence MQSGTHCLWTDQLLQGSEKGFQSRHLACLPREPGLCTWQSLRSQIA
Nucleotide Sequence CTGCAGAGTGGCACTCATTGCTTGTGGACGGACCAGCTCCTCCAAGGCTCTGAAAAGGGCTTCCAGTCCCGTCACCTTGCCTGCCTGCCTCGGGAGCCAGGGCTGTGCACCTGGCAGTCCCTGCGGTCCCAGATAGCCTGA

CircID chrX:47586521|47586724
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MKRASSPVTLPACLGSQGCAPGSPCGPR
Nucleotide Sequence CTGAAAAGGGCTTCCAGTCCCGTCACCTTGCCTGCCTGCCTCGGGAGCCAGGGCTGTGCACCTGGCAGTCCCTGCGGTCCCAGATAG

CircID chrX:47586521|47586724
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MPASGARAVHLAVPAVPDSLNPARSGS
Nucleotide Sequence CTGCCTGCCTCGGGAGCCAGGGCTGTGCACCTGGCAGTCCCTGCGGTCCCAGATAGCCTGAATCCTGCCCGGAGTGGAAGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites