CircRNA Information

General Information
circRNA Basic Information
CircID chrX:48560919|48561073
Strand -
CircType exon
Host Gene ENSG00000068354.14;
Algorism CIRI2;
Sequence CTGCAGTCAGAGGTGTGGGACTCAGAGGAGGGGGCTGAGGCCACAGCCGCATCTTGATCAGGCTTTCTCAAGCCCTCCATCGGCCCCACCAGATCTCCATTCTTTGCCATGAGGGCCAACACATGAGACCCCACCTCCCTCCCTGCCTGCCAGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:48560919|48561073 hsa-miR-186-5p 0 0 1
chrX:48560919|48561073 hsa-miR-186-3p 0 0 1
chrX:48560919|48561073 hsa-miR-328-5p 0 0 1
chrX:48560919|48561073 hsa-miR-328-3p 0 0 1
chrX:48560919|48561073 hsa-miR-345-5p 0 0 1
chrX:48560919|48561073 hsa-miR-345-3p 0 0 1
chrX:48560919|48561073 hsa-miR-539-5p 0 0 1
chrX:48560919|48561073 hsa-miR-539-3p 0 0 1
chrX:48560919|48561073 hsa-miR-580-5p 0 0 1
chrX:48560919|48561073 hsa-miR-580-3p 0 0 1
chrX:48560919|48561073 hsa-miR-620 0 0 1
chrX:48560919|48561073 hsa-miR-541-5p 0 0 1
chrX:48560919|48561073 hsa-miR-541-3p 0 0 1
chrX:48560919|48561073 hsa-miR-940 0 0 1
chrX:48560919|48561073 hsa-miR-1228-5p 0 0 1
chrX:48560919|48561073 hsa-miR-1228-3p 0 0 1
chrX:48560919|48561073 hsa-miR-663b 0 0 1
chrX:48560919|48561073 hsa-miR-1291 0 0 1
chrX:48560919|48561073 hsa-miR-1270 0 1 1
chrX:48560919|48561073 hsa-miR-1321 1 1 1
chrX:48560919|48561073 hsa-miR-615-5p 0 0 1
chrX:48560919|48561073 hsa-miR-654-5p 0 0 1
chrX:48560919|48561073 hsa-miR-188-3p 0 0 1
chrX:48560919|48561073 hsa-miR-1207-5p 1 1 1
chrX:48560919|48561073 hsa-miR-509-3-5p 0 0 1
chrX:48560919|48561073 hsa-miR-509-5p 0 0 1
chrX:48560919|48561073 hsa-miR-1300 0 0 1
chrX:48560919|48561073 hsa-miR-1201 0 0 1
chrX:48560919|48561073 hsa-miR-596 1 0 0
chrX:48560919|48561073 hsa-miR-608 1 0 0
chrX:48560919|48561073 hsa-miR-650 1 0 0
chrX:48560919|48561073 hsa-miR-658 1 0 0
chrX:48560919|48561073 hsa-miR-3141 1 0 0
chrX:48560919|48561073 hsa-miR-4293 0 1 0
chrX:48560919|48561073 hsa-miR-4270 1 1 0
chrX:48560919|48561073 hsa-miR-3921 0 1 0
chrX:48560919|48561073 hsa-miR-3937 1 0 0
chrX:48560919|48561073 hsa-miR-4441 0 1 0
chrX:48560919|48561073 hsa-miR-3689c 1 0 0
chrX:48560919|48561073 hsa-miR-4510 1 1 0
chrX:48560919|48561073 hsa-miR-4514 1 1 0
chrX:48560919|48561073 hsa-miR-4534 1 0 0
chrX:48560919|48561073 hsa-miR-4651 1 0 0
chrX:48560919|48561073 hsa-miR-4656 1 0 0
chrX:48560919|48561073 hsa-miR-4673 1 0 0
chrX:48560919|48561073 hsa-miR-4683 0 1 0
chrX:48560919|48561073 hsa-miR-4692 1 1 0
chrX:48560919|48561073 hsa-miR-4706 1 1 0
chrX:48560919|48561073 hsa-miR-4710 1 0 0
chrX:48560919|48561073 hsa-miR-4739 1 1 0
chrX:48560919|48561073 hsa-miR-5193 0 1 0
chrX:48560919|48561073 hsa-miR-6090 1 0 0
chrX:48560919|48561073 hsa-miR-6127 1 1 0
chrX:48560919|48561073 hsa-miR-6129 1 1 0
chrX:48560919|48561073 hsa-miR-6133 1 1 0
chrX:48560919|48561073 hsa-miR-7150 1 1 0
chrX:48560919|48561073 hsa-miR-8073 1 1 0
chrX:48560919|48561073 hsa-miR-8081 0 1 0
chrX:48560919|48561073 hsa-miR-8085 1 0 0
chrX:48560919|48561073 hsa-miR-11400 0 1 0
chrX:48560919|48561073 hsa-miR-92a-2-5p 0 1 0
chrX:48560919|48561073 hsa-miR-128-1-5p 0 1 0
chrX:48560919|48561073 hsa-miR-7106-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6825-5p 1 1 0
chrX:48560919|48561073 hsa-miR-6857-5p 0 1 0
chrX:48560919|48561073 hsa-miR-3692-3p 0 1 0
chrX:48560919|48561073 hsa-miR-6799-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6515-5p 0 1 0
chrX:48560919|48561073 hsa-miR-6727-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6806-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6721-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6796-5p 1 1 0
chrX:48560919|48561073 hsa-miR-6732-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6760-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6782-5p 1 0 0
chrX:48560919|48561073 hsa-miR-30b-3p 1 0 0
chrX:48560919|48561073 hsa-miR-6786-5p 1 1 0
chrX:48560919|48561073 hsa-miR-7109-5p 1 0 0
chrX:48560919|48561073 hsa-miR-1908-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6771-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6878-3p 0 1 0
chrX:48560919|48561073 hsa-miR-6780a-3p 0 1 0
chrX:48560919|48561073 hsa-miR-4667-3p 0 1 0
chrX:48560919|48561073 hsa-miR-149-3p 1 1 0
chrX:48560919|48561073 hsa-miR-3162-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6877-5p 0 1 0
chrX:48560919|48561073 hsa-miR-7112-5p 1 0 0
chrX:48560919|48561073 hsa-miR-4762-3p 1 0 0
chrX:48560919|48561073 hsa-miR-4433a-5p 0 1 0
chrX:48560919|48561073 hsa-miR-6847-3p 0 1 0
chrX:48560919|48561073 hsa-miR-1233-5p 1 0 0
chrX:48560919|48561073 hsa-miR-3689b-3p 1 0 0
chrX:48560919|48561073 hsa-miR-4763-3p 1 1 0
chrX:48560919|48561073 hsa-miR-6769b-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6787-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6870-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6893-5p 1 1 0
chrX:48560919|48561073 hsa-miR-6726-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6737-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6754-5p 1 1 0
chrX:48560919|48561073 hsa-miR-6756-5p 1 1 0
chrX:48560919|48561073 hsa-miR-6803-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6851-5p 1 0 0
chrX:48560919|48561073 hsa-miR-1249-5p 1 1 0
chrX:48560919|48561073 hsa-miR-6722-3p 1 0 0
chrX:48560919|48561073 hsa-miR-6751-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6779-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6797-5p 1 1 0
chrX:48560919|48561073 hsa-miR-6808-5p 1 1 0
chrX:48560919|48561073 hsa-miR-6879-5p 1 0 0
chrX:48560919|48561073 hsa-miR-7111-5p 1 0 0
chrX:48560919|48561073 hsa-miR-4728-5p 1 1 0
chrX:48560919|48561073 hsa-miR-5196-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6780b-5p 1 0 0
chrX:48560919|48561073 hsa-miR-10396b-5p 1 0 0
chrX:48560919|48561073 hsa-miR-1909-3p 1 0 0
chrX:48560919|48561073 hsa-miR-3689a-3p 1 1 0
chrX:48560919|48561073 hsa-miR-4649-5p 1 0 0
chrX:48560919|48561073 hsa-miR-4749-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6735-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6777-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6848-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6883-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6889-5p 1 0 0
chrX:48560919|48561073 hsa-miR-4436b-3p 1 0 0
chrX:48560919|48561073 hsa-miR-6831-5p 1 0 0
chrX:48560919|48561073 hsa-miR-939-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6511b-5p 1 0 0
chrX:48560919|48561073 hsa-miR-4747-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6891-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6766-5p 1 0 0
chrX:48560919|48561073 hsa-miR-6785-5p 1 0 0
chrX:48560919|48561073 hsa-miR-3689d 0 1 0
chrX:48560919|48561073 hsa-miR-6762-5p 1 0 0
chrX:48560919|48561073 hsa-miR-9851-5p 1 1 0
chrX:48560919|48561073 hsa-miR-4756-5p 1 0 0
chrX:48560919|48561073 hsa-miR-128-2-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chrX:48560919|48561073
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MRPQPHLDQAFSSPPSAPPDLHSLP
Nucleotide Sequence CTGAGGCCACAGCCGCATCTTGATCAGGCTTTCTCAAGCCCTCCATCGGCCCCACCAGATCTCCATTCTTTGCCATGA
CircID chrX:48560919|48561073
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MIRLSQALHRPHQISILCHEGQHMRPHLPPCLPA
Nucleotide Sequence TTGATCAGGCTTTCTCAAGCCCTCCATCGGCCCCACCAGATCTCCATTCTTTGCCATGAGGGCCAACACATGAGACCCCACCTCCCTCCCTGCCTGCCAGCC
CircID chrX:48560919|48561073
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MALMAKNGDLVGPMEGLRKPDQDAAVASAPSSESHTSDC
Nucleotide Sequence TTGGCCCTCATGGCAAAGAATGGAGATCTGGTGGGGCCGATGGAGGGCTTGAGAAAGCCTGATCAAGATGCGGCTGTGGCCTCAGCCCCCTCCTCTGAGTCCCACACCTCTGACTGC
CircID chrX:48560919|48561073
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence LAGREGGGVSCVGPHGKEWRSGGADGGLEKA
Nucleotide Sequence CTGGCAGGCAGGGAGGGAGGTGGGGTCTCATGTGTTGGCCCTCATGGCAAAGAATGGAGATCTGGTGGGGCCGATGGAGGGCTTGAGAAAGCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab