CircRNA Information

General Information
circRNA Basic Information
CircID chrX:48922481|48922587
Strand -
CircType exon
Host Gene ENSG00000068308.12;
Algorism CIRI2;
Sequence CCTAGACCCTGGGCCGGCCTCCATGCAGCTGGAGGCCAGAAGACAGCAACCCATATCTTTGCACCCTCCTCCATGCCCCATGGCCTGCCTGCCCAGAAAGATGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:48922481|48922587 hsa-miR-19a-5p 0 0 1
chrX:48922481|48922587 hsa-miR-19a-3p 0 0 1
chrX:48922481|48922587 hsa-miR-527 0 0 1
chrX:48922481|48922587 hsa-miR-601 0 0 1
chrX:48922481|48922587 hsa-miR-612 0 0 1
chrX:48922481|48922587 hsa-miR-626 0 0 1
chrX:48922481|48922587 hsa-miR-650 0 0 1
chrX:48922481|48922587 hsa-miR-766-5p 0 0 1
chrX:48922481|48922587 hsa-miR-766-3p 0 0 1
chrX:48922481|48922587 hsa-miR-765 0 0 1
chrX:48922481|48922587 hsa-miR-940 0 0 1
chrX:48922481|48922587 hsa-miR-1182 0 0 1
chrX:48922481|48922587 hsa-miR-486-3p 0 0 1
chrX:48922481|48922587 hsa-miR-518a-5p 0 0 1
chrX:48922481|48922587 hsa-miR-1285 0 0 1
chrX:48922481|48922587 hsa-miR-19b 0 0 1
chrX:48922481|48922587 hsa-miR-1268a 1 0 0
chrX:48922481|48922587 hsa-miR-2861 1 0 0
chrX:48922481|48922587 hsa-miR-3141 1 0 0
chrX:48922481|48922587 hsa-miR-3147 1 0 0
chrX:48922481|48922587 hsa-miR-4260 1 1 0
chrX:48922481|48922587 hsa-miR-4253 1 0 0
chrX:48922481|48922587 hsa-miR-3945 1 0 0
chrX:48922481|48922587 hsa-miR-1268b 1 1 0
chrX:48922481|48922587 hsa-miR-4488 1 0 0
chrX:48922481|48922587 hsa-miR-4514 0 1 0
chrX:48922481|48922587 hsa-miR-4692 0 1 0
chrX:48922481|48922587 hsa-miR-4706 1 0 0
chrX:48922481|48922587 hsa-miR-4736 1 0 0
chrX:48922481|48922587 hsa-miR-4739 1 0 0
chrX:48922481|48922587 hsa-miR-5698 1 0 0
chrX:48922481|48922587 hsa-miR-6075 0 1 0
chrX:48922481|48922587 hsa-miR-6090 1 0 0
chrX:48922481|48922587 hsa-miR-6860 0 1 0
chrX:48922481|48922587 hsa-miR-511-5p 0 1 0
chrX:48922481|48922587 hsa-miR-6861-5p 1 0 0
chrX:48922481|48922587 hsa-miR-7106-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6825-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6894-5p 1 0 0
chrX:48922481|48922587 hsa-miR-1972 0 1 0
chrX:48922481|48922587 hsa-miR-6804-5p 0 1 0
chrX:48922481|48922587 hsa-miR-6515-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6089 0 1 0
chrX:48922481|48922587 hsa-miR-4722-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6727-5p 1 0 0
chrX:48922481|48922587 hsa-miR-3622b-5p 1 0 0
chrX:48922481|48922587 hsa-miR-3187-3p 1 0 0
chrX:48922481|48922587 hsa-miR-6742-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6716-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6772-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6732-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6881-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6514-5p 1 0 0
chrX:48922481|48922587 hsa-miR-4711-3p 0 1 0
chrX:48922481|48922587 hsa-miR-6740-3p 0 1 0
chrX:48922481|48922587 hsa-miR-6786-5p 1 0 0
chrX:48922481|48922587 hsa-miR-4640-5p 1 0 0
chrX:48922481|48922587 hsa-miR-149-3p 1 0 0
chrX:48922481|48922587 hsa-miR-1207-5p 1 0 0
chrX:48922481|48922587 hsa-miR-4763-3p 1 0 0
chrX:48922481|48922587 hsa-miR-6816-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6893-5p 0 1 0
chrX:48922481|48922587 hsa-miR-6775-5p 1 1 0
chrX:48922481|48922587 hsa-miR-6752-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6754-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6803-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6842-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6851-5p 1 0 0
chrX:48922481|48922587 hsa-miR-1249-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6751-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6779-5p 1 0 0
chrX:48922481|48922587 hsa-miR-7111-5p 1 0 0
chrX:48922481|48922587 hsa-miR-4728-5p 1 0 0
chrX:48922481|48922587 hsa-miR-5189-5p 1 1 0
chrX:48922481|48922587 hsa-miR-5196-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6862-5p 0 1 0
chrX:48922481|48922587 hsa-miR-1237-5p 1 0 0
chrX:48922481|48922587 hsa-miR-328-5p 1 0 0
chrX:48922481|48922587 hsa-miR-4649-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6858-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6883-5p 1 1 0
chrX:48922481|48922587 hsa-miR-3187-5p 0 1 0
chrX:48922481|48922587 hsa-miR-6511a-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6511b-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6855-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6785-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6762-5p 1 0 0
chrX:48922481|48922587 hsa-miR-6876-3p 0 1 0
chrX:48922481|48922587 hsa-miR-6764-5p 0 1 0
chrX:48922481|48922587 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:48922481|48922587
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MQLEARRQQPISLHPPPCPMACLPRKMP
Nucleotide Sequence ATGCAGCTGGAGGCCAGAAGACAGCAACCCATATCTTTGCACCCTCCTCCATGCCCCATGGCCTGCCTGCCCAGAAAGATGCCA
CircID chrX:48922481|48922587
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MGRPPCSWRPEDSNPYLCTLLHAPWPACPERCH
Nucleotide Sequence CTGGGCCGGCCTCCATGCAGCTGGAGGCCAGAAGACAGCAACCCATATCTTTGCACCCTCCTCCATGCCCCATGGCCTGCCTGCCCAGAAAGATGCCAC
CircID chrX:48922481|48922587
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MGRQAMGHGGGCKDMGCCLLASSCMEAGPGSR
Nucleotide Sequence CTGGGCAGGCAGGCCATGGGGCATGGAGGAGGGTGCAAAGATATGGGTTGCTGTCTTCTGGCCTCCAGCTGCATGGAGGCCGGCCCAGGGTCTAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab