CircRNA Information

General Information
circRNA Basic Information
CircID chrX:49071453|49071725
Strand +
CircType exon
Host Gene ENSG00000243279.3;
Algorism CIRI2;
Sequence CCCCACGCCAGCCCCAAACTAAGATATCCCTCACACCCAGCCCCCATTACCTAGGGACAAGAGTCTTCCCCAGCCTTGAACCCAGGACCAAGAGCCACCTACATCCAGCCCCAAAACTGGCTTCAGGCCAGAGCATCCATGGCCAATTTCAAATTGTGAACCCAGAGACACTCCCATCCACCCTTCTCCATGCTCATCCCCAAACTGGGGCCTGGGGCAAGGCACTCTCAAATCTTGAACCCTGGACCAAAGCTTTTCCAGACCCCACCCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:49071453|49071725 hsa-miR-122-5p 0 0 1
chrX:49071453|49071725 hsa-miR-122-3p 0 0 1
chrX:49071453|49071725 hsa-miR-326 0 0 1
chrX:49071453|49071725 hsa-miR-133b 0 0 1
chrX:49071453|49071725 hsa-miR-519e-5p 0 0 1
chrX:49071453|49071725 hsa-miR-519e-3p 0 0 1
chrX:49071453|49071725 hsa-miR-575 0 1 1
chrX:49071453|49071725 hsa-miR-588 0 0 1
chrX:49071453|49071725 hsa-miR-593-5p 0 0 1
chrX:49071453|49071725 hsa-miR-593-3p 0 0 1
chrX:49071453|49071725 hsa-miR-609 0 0 1
chrX:49071453|49071725 hsa-miR-760 1 0 1
chrX:49071453|49071725 hsa-miR-1287-5p 0 0 1
chrX:49071453|49071725 hsa-miR-1287-3p 0 0 1
chrX:49071453|49071725 hsa-miR-1294 0 0 1
chrX:49071453|49071725 hsa-miR-1299 0 0 1
chrX:49071453|49071725 hsa-miR-1255a 1 1 1
chrX:49071453|49071725 hsa-miR-513b-5p 0 0 1
chrX:49071453|49071725 hsa-miR-513b-3p 0 0 1
chrX:49071453|49071725 hsa-miR-615-5p 0 0 1
chrX:49071453|49071725 hsa-miR-490-5p 0 0 1
chrX:49071453|49071725 hsa-miR-875-3p 0 0 1
chrX:49071453|49071725 hsa-miR-330-5p 0 0 1
chrX:49071453|49071725 hsa-miR-515-3p 0 1 1
chrX:49071453|49071725 hsa-miR-1255b 0 0 1
chrX:49071453|49071725 hsa-miR-7 0 0 1
chrX:49071453|49071725 hsa-miR-9 0 0 1
chrX:49071453|49071725 hsa-miR-203 0 0 1
chrX:49071453|49071725 hsa-miR-768-3p 0 0 1
chrX:49071453|49071725 hsa-miR-133a 0 0 1
chrX:49071453|49071725 hsa-miR-601 1 0 0
chrX:49071453|49071725 hsa-miR-608 1 1 0
chrX:49071453|49071725 hsa-miR-637 1 0 0
chrX:49071453|49071725 hsa-miR-638 1 0 0
chrX:49071453|49071725 hsa-miR-661 1 0 0
chrX:49071453|49071725 hsa-miR-762 1 1 0
chrX:49071453|49071725 hsa-miR-765 1 0 0
chrX:49071453|49071725 hsa-miR-1293 1 0 0
chrX:49071453|49071725 hsa-miR-1275 1 0 0
chrX:49071453|49071725 hsa-miR-1538 1 0 0
chrX:49071453|49071725 hsa-miR-2861 1 0 0
chrX:49071453|49071725 hsa-miR-3141 1 0 0
chrX:49071453|49071725 hsa-miR-3147 1 0 0
chrX:49071453|49071725 hsa-miR-3154 1 1 0
chrX:49071453|49071725 hsa-miR-3165 0 1 0
chrX:49071453|49071725 hsa-miR-3176 0 1 0
chrX:49071453|49071725 hsa-miR-4316 1 0 0
chrX:49071453|49071725 hsa-miR-4322 1 0 0
chrX:49071453|49071725 hsa-miR-4259 1 0 0
chrX:49071453|49071725 hsa-miR-4260 1 1 0
chrX:49071453|49071725 hsa-miR-4253 1 0 0
chrX:49071453|49071725 hsa-miR-4271 1 0 0
chrX:49071453|49071725 hsa-miR-4281 1 0 0
chrX:49071453|49071725 hsa-miR-3652 1 1 0
chrX:49071453|49071725 hsa-miR-3945 1 0 0
chrX:49071453|49071725 hsa-miR-4430 1 1 0
chrX:49071453|49071725 hsa-miR-4440 1 0 0
chrX:49071453|49071725 hsa-miR-4447 1 0 0
chrX:49071453|49071725 hsa-miR-4449 1 0 0
chrX:49071453|49071725 hsa-miR-4450 1 0 0
chrX:49071453|49071725 hsa-miR-4466 1 0 0
chrX:49071453|49071725 hsa-miR-4488 1 0 0
chrX:49071453|49071725 hsa-miR-4489 1 0 0
chrX:49071453|49071725 hsa-miR-4492 1 1 0
chrX:49071453|49071725 hsa-miR-4498 1 1 0
chrX:49071453|49071725 hsa-miR-4505 1 1 0
chrX:49071453|49071725 hsa-miR-2392 1 0 0
chrX:49071453|49071725 hsa-miR-4507 1 0 0
chrX:49071453|49071725 hsa-miR-4508 1 0 0
chrX:49071453|49071725 hsa-miR-4510 1 0 0
chrX:49071453|49071725 hsa-miR-4516 1 1 0
chrX:49071453|49071725 hsa-miR-4525 1 0 0
chrX:49071453|49071725 hsa-miR-4531 0 1 0
chrX:49071453|49071725 hsa-miR-4534 1 0 0
chrX:49071453|49071725 hsa-miR-1587 1 0 0
chrX:49071453|49071725 hsa-miR-3978 1 1 0
chrX:49071453|49071725 hsa-miR-4651 1 0 0
chrX:49071453|49071725 hsa-miR-4654 1 0 0
chrX:49071453|49071725 hsa-miR-4656 1 0 0
chrX:49071453|49071725 hsa-miR-4706 1 0 0
chrX:49071453|49071725 hsa-miR-4710 1 0 0
chrX:49071453|49071725 hsa-miR-4739 1 0 0
chrX:49071453|49071725 hsa-miR-4741 1 0 0
chrX:49071453|49071725 hsa-miR-5194 1 0 0
chrX:49071453|49071725 hsa-miR-5572 1 0 0
chrX:49071453|49071725 hsa-miR-5703 1 0 0
chrX:49071453|49071725 hsa-miR-5705 1 0 0
chrX:49071453|49071725 hsa-miR-5787 1 1 0
chrX:49071453|49071725 hsa-miR-6069 1 0 0
chrX:49071453|49071725 hsa-miR-6085 1 0 0
chrX:49071453|49071725 hsa-miR-6086 1 0 0
chrX:49071453|49071725 hsa-miR-6124 1 0 0
chrX:49071453|49071725 hsa-miR-6127 1 0 0
chrX:49071453|49071725 hsa-miR-6129 1 0 0
chrX:49071453|49071725 hsa-miR-6132 1 0 0
chrX:49071453|49071725 hsa-miR-6133 1 0 0
chrX:49071453|49071725 hsa-miR-6745 1 1 0
chrX:49071453|49071725 hsa-miR-7704 1 0 0
chrX:49071453|49071725 hsa-miR-8077 1 0 0
chrX:49071453|49071725 hsa-miR-8089 1 0 0
chrX:49071453|49071725 hsa-miR-12118 1 0 0
chrX:49071453|49071725 hsa-miR-12119 1 0 0
chrX:49071453|49071725 hsa-miR-7-5p 0 1 0
chrX:49071453|49071725 hsa-miR-4731-5p 1 0 0
chrX:49071453|49071725 hsa-miR-629-5p 1 1 0
chrX:49071453|49071725 hsa-miR-6747-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6861-5p 1 0 0
chrX:49071453|49071725 hsa-miR-7106-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6894-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6857-5p 1 0 0
chrX:49071453|49071725 hsa-miR-1972 1 0 0
chrX:49071453|49071725 hsa-miR-4687-3p 1 0 0
chrX:49071453|49071725 hsa-miR-8071 1 0 0
chrX:49071453|49071725 hsa-miR-5187-5p 1 1 0
chrX:49071453|49071725 hsa-miR-1227-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6089 1 0 0
chrX:49071453|49071725 hsa-miR-6807-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6880-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6744-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6730-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6890-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6741-5p 1 0 0
chrX:49071453|49071725 hsa-miR-4474-3p 1 0 0
chrX:49071453|49071725 hsa-miR-3622b-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6759-5p 1 0 0
chrX:49071453|49071725 hsa-miR-3187-3p 0 1 0
chrX:49071453|49071725 hsa-miR-6721-5p 1 0 0
chrX:49071453|49071725 hsa-miR-5589-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6776-5p 1 0 0
chrX:49071453|49071725 hsa-miR-1915-5p 0 1 0
chrX:49071453|49071725 hsa-miR-6742-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6716-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6871-5p 1 1 0
chrX:49071453|49071725 hsa-miR-3151-5p 1 0 0
chrX:49071453|49071725 hsa-miR-659-3p 1 0 0
chrX:49071453|49071725 hsa-miR-6748-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6772-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6793-5p 1 1 0
chrX:49071453|49071725 hsa-miR-6796-5p 1 1 0
chrX:49071453|49071725 hsa-miR-185-3p 1 1 0
chrX:49071453|49071725 hsa-miR-6829-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6732-5p 1 0 0
chrX:49071453|49071725 hsa-miR-23a-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6798-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6760-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6881-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6782-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6810-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6786-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6835-5p 1 0 0
chrX:49071453|49071725 hsa-miR-7109-5p 1 0 0
chrX:49071453|49071725 hsa-miR-1226-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6740-5p 1 1 0
chrX:49071453|49071725 hsa-miR-1909-5p 0 1 0
chrX:49071453|49071725 hsa-miR-3944-3p 1 0 0
chrX:49071453|49071725 hsa-miR-4786-3p 1 1 0
chrX:49071453|49071725 hsa-miR-4640-5p 1 0 0
chrX:49071453|49071725 hsa-miR-3691-5p 1 1 0
chrX:49071453|49071725 hsa-miR-296-3p 1 0 0
chrX:49071453|49071725 hsa-miR-6823-5p 0 1 0
chrX:49071453|49071725 hsa-miR-485-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6834-5p 1 0 0
chrX:49071453|49071725 hsa-miR-4743-5p 1 0 0
chrX:49071453|49071725 hsa-miR-4787-5p 1 0 0
chrX:49071453|49071725 hsa-miR-4446-3p 1 0 0
chrX:49071453|49071725 hsa-miR-149-3p 1 0 0
chrX:49071453|49071725 hsa-miR-202-3p 1 0 0
chrX:49071453|49071725 hsa-miR-6781-5p 1 0 0
chrX:49071453|49071725 hsa-miR-194-3p 1 0 0
chrX:49071453|49071725 hsa-miR-5010-5p 1 0 0
chrX:49071453|49071725 hsa-miR-7152-3p 1 0 0
chrX:49071453|49071725 hsa-miR-4727-3p 1 0 0
chrX:49071453|49071725 hsa-miR-208a-5p 1 0 0
chrX:49071453|49071725 hsa-miR-3675-5p 1 0 0
chrX:49071453|49071725 hsa-miR-1207-5p 1 0 0
chrX:49071453|49071725 hsa-miR-1233-5p 1 0 0
chrX:49071453|49071725 hsa-miR-4763-3p 1 0 0
chrX:49071453|49071725 hsa-miR-6769b-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6778-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6812-5p 1 1 0
chrX:49071453|49071725 hsa-miR-6816-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6870-5p 1 0 0
chrX:49071453|49071725 hsa-miR-5001-5p 1 1 0
chrX:49071453|49071725 hsa-miR-6726-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6737-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6752-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6756-5p 1 1 0
chrX:49071453|49071725 hsa-miR-6769a-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6803-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6813-5p 1 1 0
chrX:49071453|49071725 hsa-miR-6815-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6819-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6842-5p 1 0 0
chrX:49071453|49071725 hsa-miR-7110-5p 1 0 0
chrX:49071453|49071725 hsa-miR-10401-5p 1 0 0
chrX:49071453|49071725 hsa-miR-11181-3p 1 0 0
chrX:49071453|49071725 hsa-miR-1249-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6751-5p 1 1 0
chrX:49071453|49071725 hsa-miR-6763-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6779-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6780a-5p 1 0 0
chrX:49071453|49071725 hsa-miR-3620-5p 1 0 0
chrX:49071453|49071725 hsa-miR-4728-5p 1 0 0
chrX:49071453|49071725 hsa-miR-5196-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6780b-5p 1 1 0
chrX:49071453|49071725 hsa-miR-6862-5p 1 0 0
chrX:49071453|49071725 hsa-miR-10526-3p 1 0 0
chrX:49071453|49071725 hsa-miR-1237-5p 1 0 0
chrX:49071453|49071725 hsa-miR-4685-5p 1 0 0
chrX:49071453|49071725 hsa-miR-4701-3p 1 0 0
chrX:49071453|49071725 hsa-miR-4725-3p 1 1 0
chrX:49071453|49071725 hsa-miR-4745-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6738-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6846-5p 1 1 0
chrX:49071453|49071725 hsa-miR-6848-5p 1 1 0
chrX:49071453|49071725 hsa-miR-6858-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6883-5p 1 0 0
chrX:49071453|49071725 hsa-miR-4697-5p 1 0 0
chrX:49071453|49071725 hsa-miR-1266-5p 1 0 0
chrX:49071453|49071725 hsa-miR-10396a-3p 1 0 0
chrX:49071453|49071725 hsa-miR-3940-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6731-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6758-5p 1 0 0
chrX:49071453|49071725 hsa-miR-1914-3p 1 0 0
chrX:49071453|49071725 hsa-miR-4665-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6736-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6855-5p 1 0 0
chrX:49071453|49071725 hsa-miR-4700-5p 1 1 0
chrX:49071453|49071725 hsa-miR-3679-5p 1 0 0
chrX:49071453|49071725 hsa-miR-4747-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6891-5p 1 0 0
chrX:49071453|49071725 hsa-miR-4472 1 0 0
chrX:49071453|49071725 hsa-miR-4716-3p 1 0 0
chrX:49071453|49071725 hsa-miR-6766-5p 1 0 0
chrX:49071453|49071725 hsa-miR-4667-5p 0 1 0
chrX:49071453|49071725 hsa-miR-6790-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6791-5p 1 0 0
chrX:49071453|49071725 hsa-miR-6824-3p 1 0 0
chrX:49071453|49071725 hsa-miR-1255b-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:49071453|49071725
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MNPGPRATYIQPQNWLQARASMANFKL
Nucleotide Sequence TTGAACCCAGGACCAAGAGCCACCTACATCCAGCCCCAAAACTGGCTTCAGGCCAGAGCATCCATGGCCAATTTCAAATTGTGA
CircID chrX:49071453|49071725
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MLIPKLGPGARHSQILNPGPKLFQTPPY
Nucleotide Sequence ATGCTCATCCCCAAACTGGGGCCTGGGGCAAGGCACTCTCAAATCTTGAACCCTGGACCAAAGCTTTTCCAGACCCCACCCTAC
CircID chrX:49071453|49071725
ORF Type ORF3
Protein Length 52
Nucleotide Length 156
Protein Sequence MASGQSIHGQFQIVNPETLPSTLLHAHPQTGAWGKALSNLEPWTKAFPDPTL
Nucleotide Sequence CTGGCTTCAGGCCAGAGCATCCATGGCCAATTTCAAATTGTGAACCCAGAGACACTCCCATCCACCCTTCTCCATGCTCATCCCCAAACTGGGGCCTGGGGCAAGGCACTCTCAAATCTTGAACCCTGGACCAAAGCTTTTCCAGACCCCACCCTA
CircID chrX:49071453|49071725
ORF Type ORF4
Protein Length 76
Nucleotide Length 231
Protein Sequence MEKLWSRVQDLRVPCPRPQFGDEHGEGWMGVSLGSQFEIGHGCSGLKPVLGLDVGGSWSWVQGWGRLLSLGNGGWV
Nucleotide Sequence CTGGAAAAGCTTTGGTCCAGGGTTCAAGATTTGAGAGTGCCTTGCCCCAGGCCCCAGTTTGGGGATGAGCATGGAGAAGGGTGGATGGGAGTGTCTCTGGGTTCACAATTTGAAATTGGCCATGGATGCTCTGGCCTGAAGCCAGTTTTGGGGCTGGATGTAGGTGGCTCTTGGTCCTGGGTTCAAGGCTGGGGAAGACTCTTGTCCCTAGGTAATGGGGGCTGGGTGTGA
CircID chrX:49071453|49071725
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MGMSMEKGGWECLWVHNLKLAMDALA
Nucleotide Sequence TTGGGGATGAGCATGGAGAAGGGTGGATGGGAGTGTCTCTGGGTTCACAATTTGAAATTGGCCATGGATGCTCTGGCCTGA
CircID chrX:49071453|49071725
ORF Type ORF6
Protein Length 29
Nucleotide Length 90
Protein Sequence MLWPEASFGAGCRWLLVLGSRLGKTLVPR
Nucleotide Sequence ATGCTCTGGCCTGAAGCCAGTTTTGGGGCTGGATGTAGGTGGCTCTTGGTCCTGGGTTCAAGGCTGGGGAAGACTCTTGTCCCTAGGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab