CircRNA Information

General Information
circRNA Basic Information
CircID chrX:53409221|53409503
Strand -
CircType exon
Host Gene ENSG00000072501.16;
Algorism CIRI2;
Sequence CTCCTCTGTCAGCTCCCCCTCTAGCTTCTTCTGCTCTTCTAGGGACTGCCTACAAAGTGAGGGCACACAGGAGTTACTCCTGCTGGTGAGAAAATACTCCTGGCTCAGAGAGCTCTGGGGGTCCTGCATGAAGAGGGGCATGTAGGTAGGGTCACAAGAACAGGCCTGGAAGTAAGGGGGACAGATGCAGAGCTACATACTTGCTAGTGGTGATGTATTCCTCCAGTTTCTCAATCCGCTTCTGATTCTCTTCAATTTCCCGCAGCTTTTGCTTGATCTTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:53409221|53409503 hsa-miR-197-5p 0 0 1
chrX:53409221|53409503 hsa-miR-197-3p 0 0 1
chrX:53409221|53409503 hsa-miR-214-5p 0 0 1
chrX:53409221|53409503 hsa-miR-214-3p 0 0 1
chrX:53409221|53409503 hsa-miR-320a-5p 0 0 1
chrX:53409221|53409503 hsa-miR-320a-3p 0 0 1
chrX:53409221|53409503 hsa-miR-496 0 0 1
chrX:53409221|53409503 hsa-miR-504-5p 0 0 1
chrX:53409221|53409503 hsa-miR-504-3p 0 0 1
chrX:53409221|53409503 hsa-miR-539-5p 0 0 1
chrX:53409221|53409503 hsa-miR-539-3p 0 0 1
chrX:53409221|53409503 hsa-miR-578 0 0 1
chrX:53409221|53409503 hsa-miR-580-5p 0 0 1
chrX:53409221|53409503 hsa-miR-580-3p 0 0 1
chrX:53409221|53409503 hsa-miR-581 0 0 1
chrX:53409221|53409503 hsa-miR-634 0 0 1
chrX:53409221|53409503 hsa-miR-758-5p 0 0 1
chrX:53409221|53409503 hsa-miR-758-3p 0 0 1
chrX:53409221|53409503 hsa-miR-765 0 0 1
chrX:53409221|53409503 hsa-miR-298 1 1 1
chrX:53409221|53409503 hsa-miR-665 0 0 1
chrX:53409221|53409503 hsa-miR-920 0 1 1
chrX:53409221|53409503 hsa-miR-939-5p 0 0 1
chrX:53409221|53409503 hsa-miR-939-3p 0 0 1
chrX:53409221|53409503 hsa-miR-940 0 0 1
chrX:53409221|53409503 hsa-miR-1226-5p 0 0 1
chrX:53409221|53409503 hsa-miR-1226-3p 0 0 1
chrX:53409221|53409503 hsa-miR-1229-5p 0 0 1
chrX:53409221|53409503 hsa-miR-1229-3p 0 0 1
chrX:53409221|53409503 hsa-miR-1286 0 1 1
chrX:53409221|53409503 hsa-miR-548p 0 0 1
chrX:53409221|53409503 hsa-miR-361-3p 0 1 1
chrX:53409221|53409503 hsa-miR-320b 0 0 1
chrX:53409221|53409503 hsa-miR-320c 0 0 1
chrX:53409221|53409503 hsa-miR-320d 0 0 1
chrX:53409221|53409503 hsa-miR-220b 0 0 1
chrX:53409221|53409503 hsa-miR-1300 0 0 1
chrX:53409221|53409503 hsa-miR-499-3p 0 0 1
chrX:53409221|53409503 hsa-miR-761 0 1 0
chrX:53409221|53409503 hsa-miR-3128 0 1 0
chrX:53409221|53409503 hsa-miR-3132 1 0 0
chrX:53409221|53409503 hsa-miR-3138 1 0 0
chrX:53409221|53409503 hsa-miR-3154 1 1 0
chrX:53409221|53409503 hsa-miR-4303 0 1 0
chrX:53409221|53409503 hsa-miR-3660 0 1 0
chrX:53409221|53409503 hsa-miR-4450 1 0 0
chrX:53409221|53409503 hsa-miR-4468 0 1 0
chrX:53409221|53409503 hsa-miR-4530 0 1 0
chrX:53409221|53409503 hsa-miR-4706 1 0 0
chrX:53409221|53409503 hsa-miR-4734 1 0 0
chrX:53409221|53409503 hsa-miR-4741 1 0 0
chrX:53409221|53409503 hsa-miR-5186 0 1 0
chrX:53409221|53409503 hsa-miR-5787 1 0 0
chrX:53409221|53409503 hsa-miR-6165 1 1 0
chrX:53409221|53409503 hsa-miR-9898 1 0 0
chrX:53409221|53409503 hsa-miR-6734-5p 1 0 0
chrX:53409221|53409503 hsa-miR-6765-5p 1 0 0
chrX:53409221|53409503 hsa-miR-1225-3p 1 0 0
chrX:53409221|53409503 hsa-miR-6746-5p 1 0 0
chrX:53409221|53409503 hsa-miR-505-5p 0 1 0
chrX:53409221|53409503 hsa-miR-4677-5p 0 1 0
chrX:53409221|53409503 hsa-miR-6817-3p 0 1 0
chrX:53409221|53409503 hsa-miR-4655-3p 1 0 0
chrX:53409221|53409503 hsa-miR-6782-5p 1 0 0
chrX:53409221|53409503 hsa-miR-6735-3p 1 0 0
chrX:53409221|53409503 hsa-miR-4738-3p 0 1 0
chrX:53409221|53409503 hsa-miR-885-3p 1 0 0
chrX:53409221|53409503 hsa-miR-7113-3p 1 0 0
chrX:53409221|53409503 hsa-miR-4690-5p 1 0 0
chrX:53409221|53409503 hsa-miR-1266-3p 0 1 0
chrX:53409221|53409503 hsa-miR-937-5p 1 0 0
chrX:53409221|53409503 hsa-miR-3162-5p 1 0 0
chrX:53409221|53409503 hsa-miR-4640-3p 0 1 0
chrX:53409221|53409503 hsa-miR-6769a-3p 1 0 0
chrX:53409221|53409503 hsa-miR-4646-3p 0 1 0
chrX:53409221|53409503 hsa-miR-6811-3p 1 0 0
chrX:53409221|53409503 hsa-miR-6889-3p 0 1 0
chrX:53409221|53409503 hsa-miR-4661-3p 0 1 0
chrX:53409221|53409503 hsa-miR-6752-3p 1 0 0
chrX:53409221|53409503 hsa-miR-5088-3p 1 0 0
chrX:53409221|53409503 hsa-miR-4749-3p 1 0 0
chrX:53409221|53409503 hsa-miR-6859-3p 0 1 0
chrX:53409221|53409503 hsa-miR-454-5p 0 1 0
chrX:53409221|53409503 hsa-miR-6515-3p 0 1 0
chrX:53409221|53409503 hsa-miR-4772-5p 1 1 0
chrX:53409221|53409503 hsa-miR-6888-3p 0 1 0
chrX:53409221|53409503 hsa-miR-6808-3p 0 1 0
chrX:53409221|53409503 hsa-miR-4650-5p 0 1 0
chrX:53409221|53409503 hsa-miR-6787-5p 1 0 0
chrX:53409221|53409503 hsa-miR-6870-5p 0 1 0
chrX:53409221|53409503 hsa-miR-6775-5p 1 0 0
chrX:53409221|53409503 hsa-miR-3127-3p 1 0 0
chrX:53409221|53409503 hsa-miR-10526-3p 1 0 0
chrX:53409221|53409503 hsa-miR-4649-5p 1 0 0
chrX:53409221|53409503 hsa-miR-6794-5p 0 1 0
chrX:53409221|53409503 hsa-miR-6858-5p 1 0 0
chrX:53409221|53409503 hsa-miR-4436b-3p 0 1 0
chrX:53409221|53409503 hsa-miR-4723-5p 0 1 0
chrX:53409221|53409503 hsa-miR-6511a-5p 1 0 0
chrX:53409221|53409503 hsa-miR-6511b-5p 1 0 0
chrX:53409221|53409503 hsa-miR-10398-3p 1 0 0
chrX:53409221|53409503 hsa-miR-6862-3p 1 0 0
chrX:53409221|53409503 hsa-miR-383-5p 0 1 0
chrX:53409221|53409503 hsa-miR-4653-5p 0 1 0
chrX:53409221|53409503 hsa-miR-499a-3p 0 1 0
chrX:53409221|53409503 hsa-miR-7973 0 1 0
chrX:53409221|53409503 hsa-miR-499b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chrX:53409221|53409503
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MAQRALGVLHEEGHVGRVTRTGLEVRGTDAELHTC
Nucleotide Sequence CTGGCTCAGAGAGCTCTGGGGGTCCTGCATGAAGAGGGGCATGTAGGTAGGGTCACAAGAACAGGCCTGGAAGTAAGGGGGACAGATGCAGAGCTACATACTTGCTAG

CircID chrX:53409221|53409503
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MQSYILASGDVFLQFLNPLLILFNFPQLLLDLG
Nucleotide Sequence ATGCAGAGCTACATACTTGCTAGTGGTGATGTATTCCTCCAGTTTCTCAATCCGCTTCTGATTCTCTTCAATTTCCCGCAGCTTTTGCTTGATCTTGGC

CircID chrX:53409221|53409503
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MSAPPLASSALLGTAYKVRAHRSYSCW
Nucleotide Sequence CTGTCAGCTCCCCCTCTAGCTTCTTCTGCTCTTCTAGGGACTGCCTACAAAGTGAGGGCACACAGGAGTTACTCCTGCTGGTGA

CircID chrX:53409221|53409503
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MREIEENQKRIEKLEEYITTSKYVALHLSPLLPGLFL
Nucleotide Sequence CTGCGGGAAATTGAAGAGAATCAGAAGCGGATTGAGAAACTGGAGGAATACATCACCACTAGCAAGTATGTAGCTCTGCATCTGTCCCCCTTACTTCCAGGCCTGTTCTTGTGA

CircID chrX:53409221|53409503
ORF Type ORF5
Protein Length 47
Nucleotide Length 141
Protein Sequence MPLFMQDPQSSLSQEYFLTSRSNSCVPSLCRQSLEEQKKLEGELTEE
Nucleotide Sequence ATGCCCCTCTTCATGCAGGACCCCCAGAGCTCTCTGAGCCAGGAGTATTTTCTCACCAGCAGGAGTAACTCCTGTGTGCCCTCACTTTGTAGGCAGTCCCTAGAAGAGCAGAAGAAGCTAGAGGGGGAGCTGACAGAGGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites