CircRNA Information

General Information
circRNA Basic Information
CircID chrX:53432035|53432306
Strand -
CircType exon
Host Gene ENSG00000072506.11;
Algorism CIRI2;
Sequence GTTGGCCTCCCTGGTCTGGTTCATTCTGGCCCATCTCACCAGCCACCAGGCGGATCACATTGAAGGTGCCCATGAGATTCACCTGTAGGACAGATGGAGACATGCTATAGGACCTGAGGCAGAAGAAGCCTTTGTCCCCTAAAAACTTTGGGGTCCTCCACAGCCAGATACTTCTTACTACCACTATCCCTGGAGAACTTCCAAGGCCTTACATCAAGAACTCGCTGGAAGTCTTCCAAGGTATGGGTCTGGCCCTTCTTTAAGTTGTACGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:53432035|53432306 hsa-miR-216a-5p 0 0 1
chrX:53432035|53432306 hsa-miR-216a-3p 0 0 1
chrX:53432035|53432306 hsa-miR-143-5p 0 0 1
chrX:53432035|53432306 hsa-miR-143-3p 0 0 1
chrX:53432035|53432306 hsa-miR-136-5p 0 0 1
chrX:53432035|53432306 hsa-miR-136-3p 0 0 1
chrX:53432035|53432306 hsa-miR-149-5p 0 0 1
chrX:53432035|53432306 hsa-miR-149-3p 0 0 1
chrX:53432035|53432306 hsa-miR-186-5p 0 0 1
chrX:53432035|53432306 hsa-miR-186-3p 0 0 1
chrX:53432035|53432306 hsa-miR-526b-5p 0 0 1
chrX:53432035|53432306 hsa-miR-526b-3p 0 0 1
chrX:53432035|53432306 hsa-miR-552-5p 0 0 1
chrX:53432035|53432306 hsa-miR-552-3p 0 0 1
chrX:53432035|53432306 hsa-miR-561-5p 0 0 1
chrX:53432035|53432306 hsa-miR-561-3p 0 0 1
chrX:53432035|53432306 hsa-miR-617 0 0 1
chrX:53432035|53432306 hsa-miR-766-5p 0 0 1
chrX:53432035|53432306 hsa-miR-766-3p 0 0 1
chrX:53432035|53432306 hsa-miR-765 0 0 1
chrX:53432035|53432306 hsa-miR-1321 0 0 1
chrX:53432035|53432306 hsa-miR-140-5p 0 0 1
chrX:53432035|53432306 hsa-miR-125a-3p 1 1 1
chrX:53432035|53432306 hsa-miR-337-3p 0 0 1
chrX:53432035|53432306 hsa-miR-515-5p 0 0 1
chrX:53432035|53432306 hsa-miR-7 0 0 1
chrX:53432035|53432306 hsa-miR-1308 0 0 1
chrX:53432035|53432306 hsa-miR-138 0 0 1
chrX:53432035|53432306 hsa-miR-611 1 0 0
chrX:53432035|53432306 hsa-miR-4299 0 1 0
chrX:53432035|53432306 hsa-miR-4456 0 1 0
chrX:53432035|53432306 hsa-miR-4751 0 1 0
chrX:53432035|53432306 hsa-miR-5787 1 0 0
chrX:53432035|53432306 hsa-miR-6088 1 0 0
chrX:53432035|53432306 hsa-miR-6131 1 0 0
chrX:53432035|53432306 hsa-miR-7974 0 1 0
chrX:53432035|53432306 hsa-miR-8066 0 1 0
chrX:53432035|53432306 hsa-miR-8087 0 1 0
chrX:53432035|53432306 hsa-miR-9900 0 1 0
chrX:53432035|53432306 hsa-miR-12128 0 1 0
chrX:53432035|53432306 hsa-miR-138-5p 1 1 0
chrX:53432035|53432306 hsa-miR-7-5p 0 1 0
chrX:53432035|53432306 hsa-miR-6765-5p 1 0 0
chrX:53432035|53432306 hsa-miR-4687-3p 1 0 0
chrX:53432035|53432306 hsa-miR-6728-5p 1 0 0
chrX:53432035|53432306 hsa-miR-6757-5p 1 0 0
chrX:53432035|53432306 hsa-miR-7847-3p 1 1 0
chrX:53432035|53432306 hsa-miR-3064-5p 0 1 0
chrX:53432035|53432306 hsa-miR-4474-3p 1 0 0
chrX:53432035|53432306 hsa-miR-4655-5p 1 0 0
chrX:53432035|53432306 hsa-miR-3180-3p 1 0 0
chrX:53432035|53432306 hsa-miR-6798-5p 1 0 0
chrX:53432035|53432306 hsa-miR-6821-5p 1 0 0
chrX:53432035|53432306 hsa-miR-6815-3p 0 1 0
chrX:53432035|53432306 hsa-miR-4640-5p 1 1 0
chrX:53432035|53432306 hsa-miR-5001-3p 0 1 0
chrX:53432035|53432306 hsa-miR-4743-5p 1 0 0
chrX:53432035|53432306 hsa-miR-6895-5p 0 1 0
chrX:53432035|53432306 hsa-miR-3158-3p 0 1 0
chrX:53432035|53432306 hsa-miR-7113-5p 0 1 0
chrX:53432035|53432306 hsa-miR-6738-3p 0 1 0
chrX:53432035|53432306 hsa-miR-676-3p 0 1 0
chrX:53432035|53432306 hsa-miR-6754-5p 1 1 0
chrX:53432035|53432306 hsa-miR-6851-5p 1 0 0
chrX:53432035|53432306 hsa-miR-3620-5p 1 0 0
chrX:53432035|53432306 hsa-miR-4726-5p 1 1 0
chrX:53432035|53432306 hsa-miR-6795-5p 1 0 0
chrX:53432035|53432306 hsa-miR-6846-5p 1 0 0
chrX:53432035|53432306 hsa-miR-6848-5p 1 0 0
chrX:53432035|53432306 hsa-miR-541-3p 1 0 0
chrX:53432035|53432306 hsa-miR-3085-3p 1 1 0
chrX:53432035|53432306 hsa-miR-6504-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chrX:53432035|53432306
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MGSSTARYFLLPLSLENFQGLTSRTRWKSSKVWVWPFFKLY
Nucleotide Sequence TTGGGGTCCTCCACAGCCAGATACTTCTTACTACCACTATCCCTGGAGAACTTCCAAGGCCTTACATCAAGAACTCGCTGGAAGTCTTCCAAGGTATGGGTCTGGCCCTTCTTTAAGTTGTAC

CircID chrX:53432035|53432306
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence LASLVWFILAHLTSHQADHIEGAHEIHL
Nucleotide Sequence TTGGCCTCCCTGGTCTGGTTCATTCTGGCCCATCTCACCAGCCACCAGGCGGATCACATTGAAGGTGCCCATGAGATTCACCTGTAG

CircID chrX:53432035|53432306
ORF Type ORF3
Protein Length 49
Nucleotide Length 150
Protein Sequence MRQKKPLSPKNFGVLHSQILLTTTIPGELPRPYIKNSLEVFQGMGLALL
Nucleotide Sequence CTGAGGCAGAAGAAGCCTTTGTCCCCTAAAAACTTTGGGGTCCTCCACAGCCAGATACTTCTTACTACCACTATCCCTGGAGAACTTCCAAGGCCTTACATCAAGAACTCGCTGGAAGTCTTCCAAGGTATGGGTCTGGCCCTTCTTTAA

CircID chrX:53432035|53432306
ORF Type ORF4
Protein Length 44
Nucleotide Length 135
Protein Sequence MEDFQRVLDVRPWKFSRDSGSKKYLAVEDPKVFRGQRLLLPQVL
Nucleotide Sequence TTGGAAGACTTCCAGCGAGTTCTTGATGTAAGGCCTTGGAAGTTCTCCAGGGATAGTGGTAGTAAGAAGTATCTGGCTGTGGAGGACCCCAAAGTTTTTAGGGGACAAAGGCTTCTTCTGCCTCAGGTCCTATAG

CircID chrX:53432035|53432306
ORF Type ORF5
Protein Length 54
Nucleotide Length 162
Protein Sequence MWRTPKFLGDKGFFCLRSYSMSPSVLQVNLMGTFNVIRLVAGEMGQNEPDQGGQ
Nucleotide Sequence CTGTGGAGGACCCCAAAGTTTTTAGGGGACAAAGGCTTCTTCTGCCTCAGGTCCTATAGCATGTCTCCATCTGTCCTACAGGTGAATCTCATGGGCACCTTCAATGTGATCCGCCTGGTGGCTGGTGAGATGGGCCAGAATGAACCAGACCAGGGAGGCCAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites