CircNet

General Information

circRNA Basic Information

CircID	chrX:53614534\|53617446
Strand	-
CircType	exon
Host Gene	ENSG00000086758.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	CTACTGAAGTGGTGACTGTGTTTGTATTTCAAGAACCATCACTGCTCTCCTCACTCCAGGACAATGGATTGACAGATGTCATGCTGCATGCACTGCTTATCAAAGATGTTCCTGCTACCCGTGAAGTCCTTGGCTCCCTCCCAAATGTATTCAGTGCACTCTGTTTGAATGCCCGAGGTCTTCAGTCTTTTGTTCAGTGTCAGCCTTTTGAACGCCTCTTCAAAGTTCTTCTGTCTCCAGATTACCTCCCAGCCATGCGGAGGAGGAGAAGTTCTGATCCCCTTGGGGATACTGCATCCAACCTGGGGAGTGCTGTCGATGAGCTCATGAGACATCAGCCCACCCTTAAAACAGATGCAACGACTGCCATCATCAAGTTACTTGAAGAAATCTGTAATCTTGGAAGGGACCCCAAATACATCTGTCAGAAGCCATCAATCCAGAAGGCAGATGGCACTGCCACTGCTCCTCCCCCAAGGTCTAATCATGCCGCAGAAGAAGCCTCTAGTGAGGATGAGGAGGAAGAGGAAGTACAGGCCATGCAGAGCTTTAATTCTACCCAGCAAAATGAAACTGAGCCTAATCAGCA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chrX:53614534\|53617446	hsa-miR-217-5p	1	1
chrX:53614534\|53617446	hsa-miR-217-3p	1	1
chrX:53614534\|53617446	hsa-miR-15a-3p	1	1
chrX:53614534\|53617446	hsa-miR-212-5p	1	1
chrX:53614534\|53617446	hsa-miR-148a-5p	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chrX:53614534\|53617446
ORF Type	ORF1
Protein Length	169
Nucleotide Length	507
Protein Sequence	MLHALLIKDVPATREVLGSLPNVFSALCLNARGLQSFVQCQPFERLFKVLLSPDYLPAMRRRRSSDPLGDTASNLGSAVDELMRHQPTLKTDATTAIIKLLEEICNLGRDPKYICQKPSIQKADGTATAPPPRSNHAAEEASSEDEEEEEVQAMQSFNSTQQNETEPNQ
Nucleotide Sequence	ATGCTGCATGCACTGCTTATCAAAGATGTTCCTGCTACCCGTGAAGTCCTTGGCTCCCTCCCAAATGTATTCAGTGCACTCTGTTTGAATGCCCGAGGTCTTCAGTCTTTTGTTCAGTGTCAGCCTTTTGAACGCCTCTTCAAAGTTCTTCTGTCTCCAGATTACCTCCCAGCCATGCGGAGGAGGAGAAGTTCTGATCCCCTTGGGGATACTGCATCCAACCTGGGGAGTGCTGTCGATGAGCTCATGAGACATCAGCCCACCCTTAAAACAGATGCAACGACTGCCATCATCAAGTTACTTGAAGAAATCTGTAATCTTGGAAGGGACCCCAAATACATCTGTCAGAAGCCATCAATCCAGAAGGCAGATGGCACTGCCACTGCTCCTCCCCCAAGGTCTAATCATGCCGCAGAAGAAGCCTCTAGTGAGGATGAGGAGGAAGAGGAAGTACAGGCCATGCAGAGCTTTAATTCTACCCAGCAAAATGAAACTGAGCCTAATCAG

CircID	chrX:53614534\|53617446
ORF Type	ORF2
Protein Length	95
Nucleotide Length	285
Protein Sequence	MSHELIDSTPQVGCSIPKGIRTSPPPHGWEVIWRQKNFEEAFKRLTLNKRLKTSGIQTECTEYIWEGAKDFTGSRNIFDKQCMQHDICQSIVLE*
Nucleotide Sequence	ATGTCTCATGAGCTCATCGACAGCACTCCCCAGGTTGGATGCAGTATCCCCAAGGGGATCAGAACTTCTCCTCCTCCGCATGGCTGGGAGGTAATCTGGAGACAGAAGAACTTTGAAGAGGCGTTCAAAAGGCTGACACTGAACAAAAGACTGAAGACCTCGGGCATTCAAACAGAGTGCACTGAATACATTTGGGAGGGAGCCAAGGACTTCACGGGTAGCAGGAACATCTTTGATAAGCAGTGCATGCAGCATGACATCTGTCAATCCATTGTCCTGGAGTGA

CircID	chrX:53614534\|53617446
ORF Type	ORF3
Protein Length	78
Nucleotide Length	234
Protein Sequence	MQRLPSSSYLKKSVILEGTPNTSVRSHQSRRQMALPLLLPQGLIMPQKKPLVRMRRKRKYRPCRALILPSKMKLSLIS
Nucleotide Sequence	ATGCAACGACTGCCATCATCAAGTTACTTGAAGAAATCTGTAATCTTGGAAGGGACCCCAAATACATCTGTCAGAAGCCATCAATCCAGAAGGCAGATGGCACTGCCACTGCTCCTCCCCCAAGGTCTAATCATGCCGCAGAAGAAGCCTCTAGTGAGGATGAGGAGGAAGAGGAAGTACAGGCCATGCAGAGCTTTAATTCTACCCAGCAAAATGAAACTGAGCCTAATCAGC

CircID	chrX:53614534\|53617446
ORF Type	ORF4
Protein Length	54
Nucleotide Length	162
Protein Sequence	MPEVFSLLFSVSLLNASSKFFCLQITSQPCGGGEVLIPLGILHPTWGVLSMSS*
Nucleotide Sequence	ATGCCCGAGGTCTTCAGTCTTTTGTTCAGTGTCAGCCTTTTGAACGCCTCTTCAAAGTTCTTCTGTCTCCAGATTACCTCCCAGCCATGCGGAGGAGGAGAAGTTCTGATCCCCTTGGGGATACTGCATCCAACCTGGGGAGTGCTGTCGATGAGCTCATGA

CircID	chrX:53614534\|53617446
ORF Type	ORF5
Protein Length	31
Nucleotide Length	93
Protein Sequence	MSCCMHCLSKMFLLPVKSLAPSQMYSVHSV*
Nucleotide Sequence	ATGTCATGCTGCATGCACTGCTTATCAAAGATGTTCCTGCTACCCGTGAAGTCCTTGGCTCCCTCCCAAATGTATTCAGTGCACTCTGTTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chrX:53614534\|53617446	MSI2	1	0	0
chrX:53614534\|53617446	U2AF2	31	26	7
chrX:53614534\|53617446	MOV10	2	0	1
chrX:53614534\|53617446	ELAVL1	14	15	8
chrX:53614534\|53617446	NCBP3	1	0	0
chrX:53614534\|53617446	FAM120A	0	0	2
chrX:53614534\|53617446	SF3B1	0	0	1
chrX:53614534\|53617446	CELF2	1	0	2
chrX:53614534\|53617446	CNBP	0	0	1
chrX:53614534\|53617446	YTHDF1	1	0	0
chrX:53614534\|53617446	UPF1	2	0	2
chrX:53614534\|53617446	TNRC6A	0	0	2
chrX:53614534\|53617446	FMR1	4	0	13
chrX:53614534\|53617446	CPSF6	3	0	1
chrX:53614534\|53617446	NUDT21	1	1	0
chrX:53614534\|53617446	CPSF4	1	0	0
chrX:53614534\|53617446	RBM15B	1	0	0
chrX:53614534\|53617446	CPSF1	2	0	0
chrX:53614534\|53617446	FUS	6	5	0
chrX:53614534\|53617446	GNL3	0	1	1
chrX:53614534\|53617446	DGCR8	0	0	2
chrX:53614534\|53617446	CPSF7	3	4	0
chrX:53614534\|53617446	SRSF1	9	11	5
chrX:53614534\|53617446	NOP58	5	1	8
chrX:53614534\|53617446	U2AF1	1	0	2
chrX:53614534\|53617446	NOP56	2	3	1
chrX:53614534\|53617446	DDX54	0	0	16
chrX:53614534\|53617446	EFTUD2	1	0	0
chrX:53614534\|53617446	SBDS	0	0	1
chrX:53614534\|53617446	GRWD1	1	0	0
chrX:53614534\|53617446	RBM10	4	4	0
chrX:53614534\|53617446	PCBP2	0	0	2
chrX:53614534\|53617446	HNRNPM	1	0	0
chrX:53614534\|53617446	RBM15	1	0	0
chrX:53614534\|53617446	SF3A3	0	0	1
chrX:53614534\|53617446	FIP1L1	4	1	0
chrX:53614534\|53617446	PTBP1	4	3	0
chrX:53614534\|53617446	HNRNPC	34	81	10
chrX:53614534\|53617446	HNRNPD	1	0	0
chrX:53614534\|53617446	TRA2A	0	0	5
chrX:53614534\|53617446	EIF3H	2	0	0
chrX:53614534\|53617446	HNRNPA1	14	21	2
chrX:53614534\|53617446	DDX3X	4	0	0
chrX:53614534\|53617446	ZC3H7B	1	1	0
chrX:53614534\|53617446	SMNDC1	0	0	1
chrX:53614534\|53617446	AUH	0	0	1
chrX:53614534\|53617446	ACIN1	0	0	9
chrX:53614534\|53617446	LIN28B	2	0	0
chrX:53614534\|53617446	QKI	0	1	0
chrX:53614534\|53617446	FXR1	0	0	4
chrX:53614534\|53617446	FXR2	2	0	1
chrX:53614534\|53617446	TIA1	1	0	0
chrX:53614534\|53617446	IGF2BP1	3	2	12
chrX:53614534\|53617446	IGF2BP3	0	0	13
chrX:53614534\|53617446	IGF2BP2	1	2	15
chrX:53614534\|53617446	TARDBP	2	3	0
chrX:53614534\|53617446	YTHDC1	6	0	0
chrX:53614534\|53617446	TAF15	1	0	0
chrX:53614534\|53617446	FBL	1	0	6
chrX:53614534\|53617446	BUD13	0	1	4
chrX:53614534\|53617446	RBFOX2	0	5	0
chrX:53614534\|53617446	PRPF8	0	1	1
chrX:53614534\|53617446	SLTM	0	0	2
chrX:53614534\|53617446	RBM47	0	0	4
chrX:53614534\|53617446	CSTF2T	1	2	4
chrX:53614534\|53617446	SRRM4	4	0	0
chrX:53614534\|53617446	CSTF2	7	8	0
chrX:53614534\|53617446	YBX3	1	0	0
chrX:53614534\|53617446	WDR33	1	0	0
chrX:53614534\|53617446	DDX24	1	0	0
chrX:53614534\|53617446	AIFM1	0	0	1
chrX:53614534\|53617446	AGO1	0	0	1
chrX:53614534\|53617446	EWSR1	1	2	1
chrX:53614534\|53617446	EIF4A3	1	3	8
chrX:53614534\|53617446	AGO2	0	0	3

CircRNA Information