CircRNA Information

General Information
circRNA Basic Information
CircID chrX:54444130|54444464
Strand -
CircType exon
Host Gene ENSG00000158526.7;
Algorism CIRI2;
Sequence AGCTAGAGAGACTGATGAGGATGAAGATGATGTGGACAGTGTGGAAGAGATGGAGGTGAAGTGGGTGCCCCCTGGGTTGGGGGATACAGATGTTTTCAATTTTCTGGAAGAGCAGCTAGATTCACAGGGAAGTGATAAGGGGATGGTGGTGGTTGGTGGTAGTAGTATTATCCAGAGAGGGCAGGGAACTTTCCTAAAGTTACACAGCCAATCCTGGAAAAGCTGGAGCAGAGCCTGGGTCTCCAGTGGTCAGTGTATTCAGCTCTCTTTTAAATCTCCCCTCCAGGTCACAGCTACGAATGATGGGGCTGCTACAGATGGGGTCTGCCCCCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:54444130|54444464 hsa-miR-15a-5p 0 0 1
chrX:54444130|54444464 hsa-miR-15a-3p 0 0 1
chrX:54444130|54444464 hsa-miR-22-5p 0 0 1
chrX:54444130|54444464 hsa-miR-22-3p 0 0 1
chrX:54444130|54444464 hsa-miR-200b-5p 0 0 1
chrX:54444130|54444464 hsa-miR-200b-3p 0 0 1
chrX:54444130|54444464 hsa-miR-15b-5p 0 0 1
chrX:54444130|54444464 hsa-miR-15b-3p 0 0 1
chrX:54444130|54444464 hsa-miR-195-5p 0 0 1
chrX:54444130|54444464 hsa-miR-195-3p 0 0 1
chrX:54444130|54444464 hsa-miR-200c-5p 0 0 1
chrX:54444130|54444464 hsa-miR-200c-3p 0 0 1
chrX:54444130|54444464 hsa-miR-326 0 0 1
chrX:54444130|54444464 hsa-miR-424-5p 0 0 1
chrX:54444130|54444464 hsa-miR-424-3p 0 0 1
chrX:54444130|54444464 hsa-miR-429 0 0 1
chrX:54444130|54444464 hsa-miR-412-5p 0 0 1
chrX:54444130|54444464 hsa-miR-412-3p 0 0 1
chrX:54444130|54444464 hsa-miR-484 0 1 1
chrX:54444130|54444464 hsa-miR-497-5p 0 0 1
chrX:54444130|54444464 hsa-miR-497-3p 0 0 1
chrX:54444130|54444464 hsa-miR-503-5p 0 0 1
chrX:54444130|54444464 hsa-miR-503-3p 0 0 1
chrX:54444130|54444464 hsa-miR-570-5p 0 0 1
chrX:54444130|54444464 hsa-miR-570-3p 0 0 1
chrX:54444130|54444464 hsa-miR-619-5p 0 0 1
chrX:54444130|54444464 hsa-miR-619-3p 0 0 1
chrX:54444130|54444464 hsa-miR-622 0 0 1
chrX:54444130|54444464 hsa-miR-631 0 0 1
chrX:54444130|54444464 hsa-miR-637 0 1 1
chrX:54444130|54444464 hsa-miR-646 0 0 1
chrX:54444130|54444464 hsa-miR-647 0 0 1
chrX:54444130|54444464 hsa-miR-651-5p 0 0 1
chrX:54444130|54444464 hsa-miR-651-3p 0 0 1
chrX:54444130|54444464 hsa-miR-766-5p 0 0 1
chrX:54444130|54444464 hsa-miR-766-3p 0 0 1
chrX:54444130|54444464 hsa-miR-1298-5p 0 0 1
chrX:54444130|54444464 hsa-miR-1298-3p 0 0 1
chrX:54444130|54444464 hsa-miR-665 0 0 1
chrX:54444130|54444464 hsa-miR-760 0 0 1
chrX:54444130|54444464 hsa-miR-1236-5p 0 0 1
chrX:54444130|54444464 hsa-miR-1236-3p 0 0 1
chrX:54444130|54444464 hsa-miR-1251-5p 0 0 1
chrX:54444130|54444464 hsa-miR-1251-3p 0 0 1
chrX:54444130|54444464 hsa-miR-1257 0 0 1
chrX:54444130|54444464 hsa-miR-1261 0 0 1
chrX:54444130|54444464 hsa-miR-486-3p 0 0 1
chrX:54444130|54444464 hsa-miR-339-5p 1 0 1
chrX:54444130|54444464 hsa-miR-525-5p 0 0 1
chrX:54444130|54444464 hsa-miR-361-3p 0 0 1
chrX:54444130|54444464 hsa-miR-767-3p 0 0 1
chrX:54444130|54444464 hsa-miR-34c-3p 0 0 1
chrX:54444130|54444464 hsa-miR-520a-5p 0 0 1
chrX:54444130|54444464 hsa-miR-330-5p 0 0 1
chrX:54444130|54444464 hsa-miR-369-3p 0 0 1
chrX:54444130|54444464 hsa-miR-220b 0 0 1
chrX:54444130|54444464 hsa-miR-1274a 0 0 1
chrX:54444130|54444464 hsa-miR-1274b 0 0 1
chrX:54444130|54444464 hsa-miR-16 0 0 1
chrX:54444130|54444464 hsa-miR-1270 0 1 0
chrX:54444130|54444464 hsa-miR-1281 1 0 0
chrX:54444130|54444464 hsa-miR-1913 1 0 0
chrX:54444130|54444464 hsa-miR-2861 1 0 0
chrX:54444130|54444464 hsa-miR-3137 1 0 0
chrX:54444130|54444464 hsa-miR-3155a 0 1 0
chrX:54444130|54444464 hsa-miR-1260b 1 0 0
chrX:54444130|54444464 hsa-miR-3175 1 0 0
chrX:54444130|54444464 hsa-miR-3197 1 0 0
chrX:54444130|54444464 hsa-miR-4311 1 1 0
chrX:54444130|54444464 hsa-miR-4328 0 1 0
chrX:54444130|54444464 hsa-miR-3652 1 0 0
chrX:54444130|54444464 hsa-miR-3661 1 0 0
chrX:54444130|54444464 hsa-miR-4449 1 0 0
chrX:54444130|54444464 hsa-miR-3155b 0 1 0
chrX:54444130|54444464 hsa-miR-4488 1 0 0
chrX:54444130|54444464 hsa-miR-4513 0 1 0
chrX:54444130|54444464 hsa-miR-4656 1 0 0
chrX:54444130|54444464 hsa-miR-4683 1 1 0
chrX:54444130|54444464 hsa-miR-4706 1 0 0
chrX:54444130|54444464 hsa-miR-4739 1 0 0
chrX:54444130|54444464 hsa-miR-5092 1 0 0
chrX:54444130|54444464 hsa-miR-5698 1 0 0
chrX:54444130|54444464 hsa-miR-5706 0 1 0
chrX:54444130|54444464 hsa-miR-6072 0 1 0
chrX:54444130|54444464 hsa-miR-6075 1 0 0
chrX:54444130|54444464 hsa-miR-7974 1 0 0
chrX:54444130|54444464 hsa-miR-8077 1 0 0
chrX:54444130|54444464 hsa-miR-134-5p 1 0 0
chrX:54444130|54444464 hsa-miR-197-3p 1 0 0
chrX:54444130|54444464 hsa-miR-4747-3p 0 1 0
chrX:54444130|54444464 hsa-miR-6734-5p 1 0 0
chrX:54444130|54444464 hsa-miR-4731-5p 0 1 0
chrX:54444130|54444464 hsa-miR-6747-3p 1 0 0
chrX:54444130|54444464 hsa-miR-3150a-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6825-5p 1 0 0
chrX:54444130|54444464 hsa-miR-3692-3p 1 1 0
chrX:54444130|54444464 hsa-miR-219a-1-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6799-5p 1 0 0
chrX:54444130|54444464 hsa-miR-7851-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6515-5p 0 1 0
chrX:54444130|54444464 hsa-miR-145-5p 0 1 0
chrX:54444130|54444464 hsa-miR-3189-5p 1 1 0
chrX:54444130|54444464 hsa-miR-1915-5p 1 0 0
chrX:54444130|54444464 hsa-miR-7108-5p 1 0 0
chrX:54444130|54444464 hsa-miR-3180-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6728-3p 0 1 0
chrX:54444130|54444464 hsa-miR-4436b-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6884-3p 1 0 0
chrX:54444130|54444464 hsa-miR-7109-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6894-3p 1 0 0
chrX:54444130|54444464 hsa-miR-7113-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6771-5p 1 0 0
chrX:54444130|54444464 hsa-miR-3202 1 0 0
chrX:54444130|54444464 hsa-miR-5196-3p 1 1 0
chrX:54444130|54444464 hsa-miR-149-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6824-5p 1 0 0
chrX:54444130|54444464 hsa-miR-146b-3p 0 1 0
chrX:54444130|54444464 hsa-miR-6776-3p 1 1 0
chrX:54444130|54444464 hsa-miR-1306-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6878-5p 1 0 0
chrX:54444130|54444464 hsa-miR-516b-5p 1 0 0
chrX:54444130|54444464 hsa-miR-490-3p 1 0 0
chrX:54444130|54444464 hsa-miR-423-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6743-3p 1 0 0
chrX:54444130|54444464 hsa-miR-1226-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6828-3p 0 1 0
chrX:54444130|54444464 hsa-miR-3180-5p 1 0 0
chrX:54444130|54444464 hsa-miR-1238-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6793-3p 0 1 0
chrX:54444130|54444464 hsa-miR-6778-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6752-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6837-3p 1 1 0
chrX:54444130|54444464 hsa-miR-3605-3p 1 0 0
chrX:54444130|54444464 hsa-miR-7151-5p 1 1 0
chrX:54444130|54444464 hsa-miR-6865-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6826-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6795-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6760-3p 1 1 0
chrX:54444130|54444464 hsa-miR-518c-5p 1 1 0
chrX:54444130|54444464 hsa-miR-5197-3p 0 1 0
chrX:54444130|54444464 hsa-miR-6729-3p 0 1 0
chrX:54444130|54444464 hsa-miR-6789-3p 1 1 0
chrX:54444130|54444464 hsa-miR-3156-3p 1 0 0
chrX:54444130|54444464 hsa-miR-598-3p 1 1 0
chrX:54444130|54444464 hsa-miR-758-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6870-5p 1 0 0
chrX:54444130|54444464 hsa-miR-1343-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6737-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6819-5p 1 0 0
chrX:54444130|54444464 hsa-miR-7107-5p 1 0 0
chrX:54444130|54444464 hsa-miR-1249-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6779-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6780a-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6797-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6754-3p 1 1 0
chrX:54444130|54444464 hsa-miR-6866-3p 0 1 0
chrX:54444130|54444464 hsa-miR-3620-5p 1 0 0
chrX:54444130|54444464 hsa-miR-4728-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6738-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6795-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6887-5p 1 0 0
chrX:54444130|54444464 hsa-miR-4697-5p 1 0 0
chrX:54444130|54444464 hsa-miR-4723-5p 1 0 0
chrX:54444130|54444464 hsa-miR-939-5p 1 0 0
chrX:54444130|54444464 hsa-miR-324-3p 1 0 0
chrX:54444130|54444464 hsa-miR-2682-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6791-5p 1 0 0
chrX:54444130|54444464 hsa-miR-6727-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6511a-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6801-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6805-3p 1 0 0
chrX:54444130|54444464 hsa-miR-4723-3p 1 1 0
chrX:54444130|54444464 hsa-miR-3085-3p 1 0 0
chrX:54444130|54444464 hsa-miR-6827-3p 1 0 0
chrX:54444130|54444464 hsa-miR-4782-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chrX:54444130|54444464
ORF Type ORF1
Protein Length 95
Nucleotide Length 285
Protein Sequence MEVKWVPPGLGDTDVFNFLEEQLDSQGSDKGMVVVGGSSIIQRGQGTFLKLHSQSWKSWSRAWVSSGQCIQLSFKSPLQVTATNDGAATDGVCPQ
Nucleotide Sequence ATGGAGGTGAAGTGGGTGCCCCCTGGGTTGGGGGATACAGATGTTTTCAATTTTCTGGAAGAGCAGCTAGATTCACAGGGAAGTGATAAGGGGATGGTGGTGGTTGGTGGTAGTAGTATTATCCAGAGAGGGCAGGGAACTTTCCTAAAGTTACACAGCCAATCCTGGAAAAGCTGGAGCAGAGCCTGGGTCTCCAGTGGTCAGTGTATTCAGCTCTCTTTTAAATCTCCCCTCCAGGTCACAGCTACGAATGATGGGGCTGCTACAGATGGGGTCTGCCCCCAG
CircID chrX:54444130|54444464
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MYPPTQGAPTSPPSLPHCPHHLHPHQSL
Nucleotide Sequence CTGTATCCCCCAACCCAGGGGGCACCCACTTCACCTCCATCTCTTCCACACTGTCCACATCATCTTCATCCTCATCAGTCTCTCTAG
CircID chrX:54444130|54444464
ORF Type ORF3
Protein Length 44
Nucleotide Length 135
Protein Sequence LGADPICSSPIIRSCDLEGRFKRELNTLTTGDPGSAPAFPGLAV
Nucleotide Sequence CTGGGGGCAGACCCCATCTGTAGCAGCCCCATCATTCGTAGCTGTGACCTGGAGGGGAGATTTAAAAGAGAGCTGAATACACTGACCACTGGAGACCCAGGCTCTGCTCCAGCTTTTCCAGGATTGGCTGTGTAA
CircID chrX:54444130|54444464
ORF Type ORF4
Protein Length 38
Nucleotide Length 114
Protein Sequence MLFQKIENICIPQPRGHPLHLHLFHTVHIIFILISLSS
Nucleotide Sequence CTGCTCTTCCAGAAAATTGAAAACATCTGTATCCCCCAACCCAGGGGGCACCCACTTCACCTCCATCTCTTCCACACTGTCCACATCATCTTCATCCTCATCAGTCTCTCTAGC
CircID chrX:54444130|54444464
ORF Type ORF5
Protein Length 82
Nucleotide Length 246
Protein Sequence METQALLQLFQDWLCNFRKVPCPLWIILLPPTTTIPLSLPCESSCSSRKLKTSVSPNPGGTHFTSISSTLSTSSSSSSVSLA
Nucleotide Sequence CTGGAGACCCAGGCTCTGCTCCAGCTTTTCCAGGATTGGCTGTGTAACTTTAGGAAAGTTCCCTGCCCTCTCTGGATAATACTACTACCACCAACCACCACCATCCCCTTATCACTTCCCTGTGAATCTAGCTGCTCTTCCAGAAAATTGAAAACATCTGTATCCCCCAACCCAGGGGGCACCCACTTCACCTCCATCTCTTCCACACTGTCCACATCATCTTCATCCTCATCAGTCTCTCTAGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab