CircRNA Information

General Information
circRNA Basic Information
CircID chrX:54447036|54447310
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence TCTTACCCACTCCAAATTGGACCTAGCAGTTCCCCATCTCTACTCCTTCCAGGAAGCCAGGCCCACAACTCATCCTGGTTTTCCCTACATACCACAACCACTCCTTGTCTCTAGCCAGTCTTTGTCTCTCAAGGGTTGGGGTTCTGATTTCCTCTTAGAGATAGGCTCACCTTATCTTCCAAGGCTCACCTTATCTTCCAAGGCCAAGGAGAGGTCAAGGACTGGATCTGGCTTTGCCAGGTGGCTGAAAGGACCCGAAGGAGTAGGATGCATAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:54447036|54447310 hsa-miR-18a-5p 0 0 1
chrX:54447036|54447310 hsa-miR-18a-3p 0 0 1
chrX:54447036|54447310 hsa-miR-192-5p 0 0 1
chrX:54447036|54447310 hsa-miR-192-3p 0 0 1
chrX:54447036|54447310 hsa-miR-215-5p 0 0 1
chrX:54447036|54447310 hsa-miR-215-3p 0 0 1
chrX:54447036|54447310 hsa-miR-122-5p 0 0 1
chrX:54447036|54447310 hsa-miR-122-3p 0 0 1
chrX:54447036|54447310 hsa-miR-18b-5p 0 0 1
chrX:54447036|54447310 hsa-miR-18b-3p 0 0 1
chrX:54447036|54447310 hsa-miR-555 0 0 1
chrX:54447036|54447310 hsa-miR-571 0 0 1
chrX:54447036|54447310 hsa-miR-586 1 0 1
chrX:54447036|54447310 hsa-miR-892b 0 0 1
chrX:54447036|54447310 hsa-miR-1255a 0 0 1
chrX:54447036|54447310 hsa-miR-140-5p 0 0 1
chrX:54447036|54447310 hsa-miR-324-5p 0 0 1
chrX:54447036|54447310 hsa-miR-516a-3p 0 0 1
chrX:54447036|54447310 hsa-miR-1255b 0 0 1
chrX:54447036|54447310 hsa-miR-7 0 0 1
chrX:54447036|54447310 hsa-miR-453 0 0 1
chrX:54447036|54447310 hsa-miR-768-5p 0 0 1
chrX:54447036|54447310 hsa-miR-219-1-3p 0 0 1
chrX:54447036|54447310 hsa-miR-184 1 0 0
chrX:54447036|54447310 hsa-miR-608 1 0 0
chrX:54447036|54447310 hsa-miR-936 1 0 0
chrX:54447036|54447310 hsa-miR-1268a 1 0 0
chrX:54447036|54447310 hsa-miR-2861 1 0 0
chrX:54447036|54447310 hsa-miR-3131 1 0 0
chrX:54447036|54447310 hsa-miR-3132 1 0 0
chrX:54447036|54447310 hsa-miR-3154 1 0 0
chrX:54447036|54447310 hsa-miR-4257 1 0 0
chrX:54447036|54447310 hsa-miR-4270 1 0 0
chrX:54447036|54447310 hsa-miR-4271 1 0 0
chrX:54447036|54447310 hsa-miR-3652 1 0 0
chrX:54447036|54447310 hsa-miR-1268b 1 0 0
chrX:54447036|54447310 hsa-miR-4430 1 0 0
chrX:54447036|54447310 hsa-miR-3135b 1 0 0
chrX:54447036|54447310 hsa-miR-4462 1 0 0
chrX:54447036|54447310 hsa-miR-4476 1 0 0
chrX:54447036|54447310 hsa-miR-4490 1 0 0
chrX:54447036|54447310 hsa-miR-2392 1 0 0
chrX:54447036|54447310 hsa-miR-4510 1 0 0
chrX:54447036|54447310 hsa-miR-4533 1 0 0
chrX:54447036|54447310 hsa-miR-4651 1 0 0
chrX:54447036|54447310 hsa-miR-4739 1 0 0
chrX:54447036|54447310 hsa-miR-4784 1 0 0
chrX:54447036|54447310 hsa-miR-6127 1 0 0
chrX:54447036|54447310 hsa-miR-6130 1 0 0
chrX:54447036|54447310 hsa-miR-6133 1 0 0
chrX:54447036|54447310 hsa-miR-6134 1 0 0
chrX:54447036|54447310 hsa-miR-8085 1 0 0
chrX:54447036|54447310 hsa-miR-12115 1 0 0
chrX:54447036|54447310 hsa-miR-211-3p 1 0 0
chrX:54447036|54447310 hsa-miR-134-5p 1 0 0
chrX:54447036|54447310 hsa-miR-4433b-3p 1 0 0
chrX:54447036|54447310 hsa-miR-6734-5p 1 0 0
chrX:54447036|54447310 hsa-miR-504-3p 1 0 0
chrX:54447036|54447310 hsa-miR-4433a-3p 1 0 0
chrX:54447036|54447310 hsa-miR-6861-5p 1 0 0
chrX:54447036|54447310 hsa-miR-7106-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6825-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6894-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6857-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6799-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6728-5p 1 0 0
chrX:54447036|54447310 hsa-miR-3692-5p 1 0 0
chrX:54447036|54447310 hsa-miR-8071 1 0 0
chrX:54447036|54447310 hsa-miR-766-5p 1 0 0
chrX:54447036|54447310 hsa-miR-3622a-5p 1 0 0
chrX:54447036|54447310 hsa-miR-7851-3p 1 0 0
chrX:54447036|54447310 hsa-miR-5187-5p 1 0 0
chrX:54447036|54447310 hsa-miR-4786-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6515-5p 1 0 0
chrX:54447036|54447310 hsa-miR-3192-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6757-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6746-5p 1 0 0
chrX:54447036|54447310 hsa-miR-3064-5p 1 0 0
chrX:54447036|54447310 hsa-miR-197-5p 1 0 0
chrX:54447036|54447310 hsa-miR-8069 1 0 0
chrX:54447036|54447310 hsa-miR-7845-5p 1 0 0
chrX:54447036|54447310 hsa-miR-491-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6716-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6772-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6796-5p 1 0 0
chrX:54447036|54447310 hsa-miR-185-3p 1 0 0
chrX:54447036|54447310 hsa-miR-23a-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6760-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6782-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6786-5p 1 0 0
chrX:54447036|54447310 hsa-miR-4793-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6749-5p 1 0 0
chrX:54447036|54447310 hsa-miR-3202 1 0 0
chrX:54447036|54447310 hsa-miR-6834-5p 1 0 0
chrX:54447036|54447310 hsa-miR-149-3p 1 0 0
chrX:54447036|54447310 hsa-miR-3162-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6832-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6801-5p 1 0 0
chrX:54447036|54447310 hsa-miR-4763-3p 1 0 0
chrX:54447036|54447310 hsa-miR-6778-5p 1 0 0
chrX:54447036|54447310 hsa-miR-1343-5p 1 0 0
chrX:54447036|54447310 hsa-miR-5001-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6726-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6737-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6743-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6754-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6819-5p 1 0 0
chrX:54447036|54447310 hsa-miR-7107-5p 1 0 0
chrX:54447036|54447310 hsa-miR-1249-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6722-3p 1 0 0
chrX:54447036|54447310 hsa-miR-6763-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6779-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6797-5p 1 0 0
chrX:54447036|54447310 hsa-miR-3620-5p 1 0 0
chrX:54447036|54447310 hsa-miR-5196-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6780b-5p 1 0 0
chrX:54447036|54447310 hsa-miR-4745-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6794-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6887-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6831-5p 1 0 0
chrX:54447036|54447310 hsa-miR-939-5p 1 0 0
chrX:54447036|54447310 hsa-miR-3940-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6856-5p 1 0 0
chrX:54447036|54447310 hsa-miR-3116 1 0 0
chrX:54447036|54447310 hsa-miR-4646-5p 1 0 0
chrX:54447036|54447310 hsa-miR-4747-5p 1 0 0
chrX:54447036|54447310 hsa-miR-6891-5p 1 0 0
chrX:54447036|54447310 hsa-miR-541-3p 1 0 0
chrX:54447036|54447310 hsa-miR-6849-5p 1 0 0
chrX:54447036|54447310 hsa-miR-5591-5p 1 0 0
chrX:54447036|54447310 hsa-miR-664a-5p 1 0 0
chrX:54447036|54447310 hsa-miR-433-5p 1 0 0
chrX:54447036|54447310 hsa-miR-7161-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:54447036|54447310
ORF Type ORF1
Protein Length 86
Nucleotide Length 258
Protein Sequence MDLAVPHLYSFQEARPTTHPGFPYIPQPLLVSSQSLSLKGWGSDFLLEIGSPYLPRLTLSSKAKERSRTGSGFARWLKGPEGVGCI
Nucleotide Sequence TTGGACCTAGCAGTTCCCCATCTCTACTCCTTCCAGGAAGCCAGGCCCACAACTCATCCTGGTTTTCCCTACATACCACAACCACTCCTTGTCTCTAGCCAGTCTTTGTCTCTCAAGGGTTGGGGTTCTGATTTCCTCTTAGAGATAGGCTCACCTTATCTTCCAAGGCTCACCTTATCTTCCAAGGCCAAGGAGAGGTCAAGGACTGGATCTGGCTTTGCCAGGTGGCTGAAAGGACCCGAAGGAGTAGGATGCATA
CircID chrX:54447036|54447310
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MVFPTYHNHSLSLASLCLSRVGVLISS
Nucleotide Sequence CTGGTTTTCCCTACATACCACAACCACTCCTTGTCTCTAGCCAGTCTTTGTCTCTCAAGGGTTGGGGTTCTGATTTCCTCTTAG
CircID chrX:54447036|54447310
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MARDKEWLWYVGKTRMSCGPGFLEGVEMGNC
Nucleotide Sequence CTGGCTAGAGACAAGGAGTGGTTGTGGTATGTAGGGAAAACCAGGATGAGTTGTGGGCCTGGCTTCCTGGAAGGAGTAGAGATGGGGAACTGCTAG
CircID chrX:54447036|54447310
ORF Type ORF4
Protein Length 33
Nucleotide Length 102
Protein Sequence MHPTPSGPFSHLAKPDPVLDLSLALEDKVSLGR
Nucleotide Sequence ATGCATCCTACTCCTTCGGGTCCTTTCAGCCACCTGGCAAAGCCAGATCCAGTCCTTGACCTCTCCTTGGCCTTGGAAGATAAGGTGAGCCTTGGAAGATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab