CircRNA Information

General Information
circRNA Basic Information
CircID chrX:65517987|65518173
Strand -
CircType exon
Host Gene ENSG00000001497.15;
Algorism CIRI2;
Sequence CTGAGCTAACCTGCCATGCAGAGCCCTGCAAAGCTCCTCTTTTCTGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCCCTGTAGAGAAAGGCCCCACCTCCATTCTGTCTTCCTCTTCATCATCTTCATCATCTTCATCCTCCTCTTCCTCCTCTTGGTCATCATTTTCTTCCTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:65517987|65518173 hsa-miR-31-5p 0 0 1
chrX:65517987|65518173 hsa-miR-31-3p 0 0 1
chrX:65517987|65518173 hsa-miR-583 0 0 1
chrX:65517987|65518173 hsa-miR-645 0 0 1
chrX:65517987|65518173 hsa-miR-657 0 0 1
chrX:65517987|65518173 hsa-miR-708-5p 0 0 1
chrX:65517987|65518173 hsa-miR-708-3p 0 0 1
chrX:65517987|65518173 hsa-miR-760 0 0 1
chrX:65517987|65518173 hsa-miR-1272 0 0 1
chrX:65517987|65518173 hsa-miR-139-5p 0 0 1
chrX:65517987|65518173 hsa-miR-361-3p 0 0 1
chrX:65517987|65518173 hsa-miR-28-5p 0 0 1
chrX:65517987|65518173 hsa-miR-1207-5p 0 0 1
chrX:65517987|65518173 hsa-miR-7 0 0 1
chrX:65517987|65518173 hsa-miR-663a 1 0 0
chrX:65517987|65518173 hsa-miR-762 1 0 0
chrX:65517987|65518173 hsa-miR-765 1 1 0
chrX:65517987|65518173 hsa-miR-665 1 0 0
chrX:65517987|65518173 hsa-miR-3125 1 1 0
chrX:65517987|65518173 hsa-miR-3132 1 0 0
chrX:65517987|65518173 hsa-miR-3139 0 1 0
chrX:65517987|65518173 hsa-miR-3154 1 0 0
chrX:65517987|65518173 hsa-miR-4299 1 0 0
chrX:65517987|65518173 hsa-miR-4271 1 1 0
chrX:65517987|65518173 hsa-miR-4286 0 1 0
chrX:65517987|65518173 hsa-miR-3652 1 0 0
chrX:65517987|65518173 hsa-miR-3662 0 1 0
chrX:65517987|65518173 hsa-miR-3916 1 1 0
chrX:65517987|65518173 hsa-miR-4496 1 0 0
chrX:65517987|65518173 hsa-miR-4502 0 1 0
chrX:65517987|65518173 hsa-miR-2392 1 1 0
chrX:65517987|65518173 hsa-miR-4510 1 1 0
chrX:65517987|65518173 hsa-miR-4525 1 0 0
chrX:65517987|65518173 hsa-miR-4534 1 0 0
chrX:65517987|65518173 hsa-miR-4644 1 0 0
chrX:65517987|65518173 hsa-miR-4647 1 1 0
chrX:65517987|65518173 hsa-miR-4688 1 0 0
chrX:65517987|65518173 hsa-miR-4689 1 0 0
chrX:65517987|65518173 hsa-miR-4736 0 1 0
chrX:65517987|65518173 hsa-miR-4739 1 0 0
chrX:65517987|65518173 hsa-miR-5093 1 0 0
chrX:65517987|65518173 hsa-miR-6086 1 0 0
chrX:65517987|65518173 hsa-miR-6088 1 0 0
chrX:65517987|65518173 hsa-miR-6124 1 0 0
chrX:65517987|65518173 hsa-miR-6125 1 0 0
chrX:65517987|65518173 hsa-miR-6126 1 0 0
chrX:65517987|65518173 hsa-miR-6127 1 0 0
chrX:65517987|65518173 hsa-miR-6129 1 0 0
chrX:65517987|65518173 hsa-miR-6132 0 1 0
chrX:65517987|65518173 hsa-miR-6133 1 1 0
chrX:65517987|65518173 hsa-miR-6165 1 0 0
chrX:65517987|65518173 hsa-miR-6745 1 0 0
chrX:65517987|65518173 hsa-miR-8085 1 0 0
chrX:65517987|65518173 hsa-miR-9500 1 0 0
chrX:65517987|65518173 hsa-miR-12114 1 0 0
chrX:65517987|65518173 hsa-miR-12115 1 0 0
chrX:65517987|65518173 hsa-miR-12118 1 0 0
chrX:65517987|65518173 hsa-miR-6749-3p 1 0 0
chrX:65517987|65518173 hsa-miR-92a-2-5p 0 1 0
chrX:65517987|65518173 hsa-miR-128-1-5p 1 0 0
chrX:65517987|65518173 hsa-miR-122-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6765-5p 1 0 0
chrX:65517987|65518173 hsa-miR-7106-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6825-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6894-5p 1 1 0
chrX:65517987|65518173 hsa-miR-6799-5p 1 0 0
chrX:65517987|65518173 hsa-miR-766-5p 1 1 0
chrX:65517987|65518173 hsa-miR-5187-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6515-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6873-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6880-5p 1 0 0
chrX:65517987|65518173 hsa-miR-7847-3p 1 1 0
chrX:65517987|65518173 hsa-miR-4695-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6744-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6746-5p 1 0 0
chrX:65517987|65518173 hsa-miR-4709-3p 1 1 0
chrX:65517987|65518173 hsa-miR-7154-3p 1 0 0
chrX:65517987|65518173 hsa-miR-4753-5p 1 0 0
chrX:65517987|65518173 hsa-miR-3682-3p 1 0 0
chrX:65517987|65518173 hsa-miR-6742-5p 1 0 0
chrX:65517987|65518173 hsa-miR-3605-5p 1 1 0
chrX:65517987|65518173 hsa-miR-6716-5p 1 0 0
chrX:65517987|65518173 hsa-miR-3180-3p 1 0 0
chrX:65517987|65518173 hsa-miR-6732-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6798-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6760-5p 1 1 0
chrX:65517987|65518173 hsa-miR-6881-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6782-5p 1 0 0
chrX:65517987|65518173 hsa-miR-3150b-3p 1 0 0
chrX:65517987|65518173 hsa-miR-6786-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6835-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6784-5p 1 0 0
chrX:65517987|65518173 hsa-miR-3691-5p 1 0 0
chrX:65517987|65518173 hsa-miR-4787-5p 1 0 0
chrX:65517987|65518173 hsa-miR-193a-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6824-5p 1 0 0
chrX:65517987|65518173 hsa-miR-5010-5p 1 0 0
chrX:65517987|65518173 hsa-miR-135b-3p 1 0 0
chrX:65517987|65518173 hsa-miR-423-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6826-5p 1 0 0
chrX:65517987|65518173 hsa-miR-208a-5p 1 0 0
chrX:65517987|65518173 hsa-miR-744-5p 1 0 0
chrX:65517987|65518173 hsa-miR-580-3p 1 0 0
chrX:65517987|65518173 hsa-miR-19b-1-5p 0 1 0
chrX:65517987|65518173 hsa-miR-4763-3p 1 0 0
chrX:65517987|65518173 hsa-miR-6769b-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6816-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6726-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6743-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6752-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6756-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6803-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6815-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6842-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6851-5p 1 0 0
chrX:65517987|65518173 hsa-miR-7110-5p 1 0 0
chrX:65517987|65518173 hsa-miR-11181-3p 1 0 0
chrX:65517987|65518173 hsa-miR-1249-5p 1 1 0
chrX:65517987|65518173 hsa-miR-6722-3p 1 0 0
chrX:65517987|65518173 hsa-miR-6751-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6788-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6797-5p 1 1 0
chrX:65517987|65518173 hsa-miR-6879-5p 1 0 0
chrX:65517987|65518173 hsa-miR-7111-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6780b-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6836-5p 1 1 0
chrX:65517987|65518173 hsa-miR-10396b-5p 1 0 0
chrX:65517987|65518173 hsa-miR-10526-3p 1 0 0
chrX:65517987|65518173 hsa-miR-1237-5p 1 0 0
chrX:65517987|65518173 hsa-miR-4649-5p 1 0 0
chrX:65517987|65518173 hsa-miR-4685-5p 1 0 0
chrX:65517987|65518173 hsa-miR-4725-3p 1 0 0
chrX:65517987|65518173 hsa-miR-4745-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6738-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6794-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6846-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6848-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6858-5p 1 0 0
chrX:65517987|65518173 hsa-miR-4436b-3p 1 0 0
chrX:65517987|65518173 hsa-miR-6831-5p 1 0 0
chrX:65517987|65518173 hsa-miR-939-5p 1 0 0
chrX:65517987|65518173 hsa-miR-4769-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6511a-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6731-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6758-5p 1 0 0
chrX:65517987|65518173 hsa-miR-6856-5p 1 0 0
chrX:65517987|65518173 hsa-miR-324-3p 0 1 0
chrX:65517987|65518173 hsa-miR-3173-3p 1 0 0
chrX:65517987|65518173 hsa-miR-3679-5p 1 0 0
chrX:65517987|65518173 hsa-miR-4716-3p 1 1 0
chrX:65517987|65518173 hsa-miR-6785-5p 0 1 0
chrX:65517987|65518173 hsa-miR-3689d 0 1 0
chrX:65517987|65518173 hsa-miR-6859-5p 1 1 0
chrX:65517987|65518173 hsa-miR-6884-5p 1 0 0
chrX:65517987|65518173 hsa-miR-128-2-5p 1 0 0
chrX:65517987|65518173 hsa-miR-10523-5p 1 0 0
chrX:65517987|65518173 hsa-miR-19b-2-5p 0 1 0
chrX:65517987|65518173 hsa-miR-519a-2-5p 0 1 0
chrX:65517987|65518173 hsa-miR-520b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:65517987|65518173
ORF Type ORF1
Protein Length 59
Nucleotide Length 177
Protein Sequence MPCRALQSSSFLGQKPSILGSGGLLPCRERPHLHSVFLFIIFIIFILLFLLLVIIFFLL
Nucleotide Sequence CTGCCATGCAGAGCCCTGCAAAGCTCCTCTTTTCTGGGCCAGAAGCCTAGCATTCTCGGCAGTGGGGGACTCTTGCCCTGTAGAGAAAGGCCCCACCTCCATTCTGTCTTCCTCTTCATCATCTTCATCATCTTCATCCTCCTCTTCCTCCTCTTGGTCATCATTTTCTTCCTCCTC
CircID chrX:65517987|65518173
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MEVGPFSTGQESPTAENARLLAQKRGALQGSAWQVSS
Nucleotide Sequence ATGGAGGTGGGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCTTTGCAGGGCTCTGCATGGCAGGTTAGCTCA
CircID chrX:65517987|65518173
ORF Type ORF3
Protein Length 58
Nucleotide Length 174
Protein Sequence MMTKRRKRRMKMMKMMKRKTEWRWGLSLQGKSPPLPRMLGFWPRKEELCRALHGRLAQ
Nucleotide Sequence ATGATGACCAAGAGGAGGAAGAGGAGGATGAAGATGATGAAGATGATGAAGAGGAAGACAGAATGGAGGTGGGGCCTTTCTCTACAGGGCAAGAGTCCCCCACTGCCGAGAATGCTAGGCTTCTGGCCCAGAAAAGAGGAGCTTTGCAGGGCTCTGCATGGCAGGTTAGCTCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab