CircRNA Information

General Information
circRNA Basic Information
CircID chrX:65740212|65740343
Strand -
CircType exon
Host Gene ENSG00000147065.15;
Algorism CIRI2;
Sequence TGTTGTCCTATGGGAGTCAAGTGTGGAGTAGGTTGGAAGCTAGCTCCCCTCCTCTCCCCTACCACTGTCTTCTTCAGGGTCCTGAGATTTACACGGTTGGAGTGTTATGCGGTCTAGGGAATGAGACAGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:65740212|65740343 hsa-miR-216a-5p 0 0 1
chrX:65740212|65740343 hsa-miR-216a-3p 0 0 1
chrX:65740212|65740343 hsa-miR-141-5p 0 0 1
chrX:65740212|65740343 hsa-miR-141-3p 0 0 1
chrX:65740212|65740343 hsa-miR-200a-5p 0 0 1
chrX:65740212|65740343 hsa-miR-200a-3p 0 0 1
chrX:65740212|65740343 hsa-miR-504-5p 0 0 1
chrX:65740212|65740343 hsa-miR-504-3p 0 0 1
chrX:65740212|65740343 hsa-miR-920 0 0 1
chrX:65740212|65740343 hsa-miR-939-5p 0 0 1
chrX:65740212|65740343 hsa-miR-939-3p 0 0 1
chrX:65740212|65740343 hsa-miR-1266-5p 0 0 1
chrX:65740212|65740343 hsa-miR-1266-3p 0 0 1
chrX:65740212|65740343 hsa-miR-1197 0 0 1
chrX:65740212|65740343 hsa-miR-508-5p 0 0 1
chrX:65740212|65740343 hsa-miR-3175 0 1 0
chrX:65740212|65740343 hsa-miR-3185 0 1 0
chrX:65740212|65740343 hsa-miR-4300 0 1 0
chrX:65740212|65740343 hsa-miR-4739 1 0 0
chrX:65740212|65740343 hsa-miR-8085 0 1 0
chrX:65740212|65740343 hsa-miR-7106-5p 1 0 0
chrX:65740212|65740343 hsa-miR-6825-5p 1 0 0
chrX:65740212|65740343 hsa-miR-6894-5p 1 0 0
chrX:65740212|65740343 hsa-miR-345-3p 0 1 0
chrX:65740212|65740343 hsa-miR-6824-5p 0 1 0
chrX:65740212|65740343 hsa-miR-2115-5p 0 1 0
chrX:65740212|65740343 hsa-miR-3664-3p 0 1 0
chrX:65740212|65740343 hsa-miR-6726-5p 0 1 0
chrX:65740212|65740343 hsa-miR-6756-5p 1 0 0
chrX:65740212|65740343 hsa-miR-4728-5p 1 0 0
chrX:65740212|65740343 hsa-miR-6836-5p 1 0 0
chrX:65740212|65740343 hsa-miR-6858-5p 1 0 0
chrX:65740212|65740343 hsa-miR-4633-3p 0 1 0
chrX:65740212|65740343 hsa-miR-6731-5p 0 1 0
chrX:65740212|65740343 hsa-miR-5591-5p 0 1 0
chrX:65740212|65740343 hsa-miR-216b-3p 0 1 0
chrX:65740212|65740343 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chrX:65740212|65740343
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MGVKCGVGWKLAPLLSPTTVFFRVLRFTRLECYAV
Nucleotide Sequence ATGGGAGTCAAGTGTGGAGTAGGTTGGAAGCTAGCTCCCCTCCTCTCCCCTACCACTGTCTTCTTCAGGGTCCTGAGATTTACACGGTTGGAGTGTTATGCGGTCTAG

CircID chrX:65740212|65740343
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence LSYGSQVWSRLEASSPPLPYHCLLQGPEIYTVGVLCGLGNETG
Nucleotide Sequence TTGTCCTATGGGAGTCAAGTGTGGAGTAGGTTGGAAGCTAGCTCCCCTCCTCTCCCCTACCACTGTCTTCTTCAGGGTCCTGAGATTTACACGGTTGGAGTGTTATGCGGTCTAGGGAATGAGACAGGA

CircID chrX:65740212|65740343
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MSHSLDRITLQPCKSQDPEEDSGRGEEGS
Nucleotide Sequence CTGTCTCATTCCCTAGACCGCATAACACTCCAACCGTGTAAATCTCAGGACCCTGAAGAAGACAGTGGTAGGGGAGAGGAGGGGAGCTAG

CircID chrX:65740212|65740343
ORF Type ORF4
Protein Length 25
Nucleotide Length 75
Protein Sequence MKKTVVGERRGASFQPTPHLTPIGQ
Nucleotide Sequence CTGAAGAAGACAGTGGTAGGGGAGAGGAGGGGAGCTAGCTTCCAACCTACTCCACACTTGACTCCCATAGGACAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites