CircRNA Information

General Information
circRNA Basic Information
CircID chrX:65740954|65741131
Strand +
CircType exon
Host Gene ENSG00000147065.15;
Algorism CIRI2;
Sequence CTGGGTTAGAGGTTTGTCAAACAGAGGCAGGGCCCAGTCACCTCTTTGGAGGGGAGTGATGAGAAGGGGATTTTGGTCACCTGAGAGGGTTGAGTAAACTTGGATCAGGGCACAGGCTTCTCTCACCATACTCAGCTTTTTGCACTCACTCCCTAGTTGAGCCTACTGGCATCAAGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:65740954|65741131 hsa-miR-19a-5p 0 0 1
chrX:65740954|65741131 hsa-miR-19a-3p 0 0 1
chrX:65740954|65741131 hsa-miR-130a-5p 0 0 1
chrX:65740954|65741131 hsa-miR-130a-3p 0 0 1
chrX:65740954|65741131 hsa-miR-134-5p 0 0 1
chrX:65740954|65741131 hsa-miR-134-3p 0 0 1
chrX:65740954|65741131 hsa-miR-320a-5p 0 0 1
chrX:65740954|65741131 hsa-miR-320a-3p 0 0 1
chrX:65740954|65741131 hsa-miR-301a-5p 0 0 1
chrX:65740954|65741131 hsa-miR-301a-3p 0 0 1
chrX:65740954|65741131 hsa-miR-130b-5p 0 0 1
chrX:65740954|65741131 hsa-miR-130b-3p 0 0 1
chrX:65740954|65741131 hsa-miR-496 0 0 1
chrX:65740954|65741131 hsa-miR-583 0 0 1
chrX:65740954|65741131 hsa-miR-605-5p 0 0 1
chrX:65740954|65741131 hsa-miR-605-3p 0 0 1
chrX:65740954|65741131 hsa-miR-640 0 0 1
chrX:65740954|65741131 hsa-miR-454-5p 0 0 1
chrX:65740954|65741131 hsa-miR-454-3p 0 0 1
chrX:65740954|65741131 hsa-miR-874-5p 0 0 1
chrX:65740954|65741131 hsa-miR-874-3p 0 0 1
chrX:65740954|65741131 hsa-miR-888-5p 0 0 1
chrX:65740954|65741131 hsa-miR-888-3p 0 0 1
chrX:65740954|65741131 hsa-miR-301b-5p 0 0 1
chrX:65740954|65741131 hsa-miR-301b-3p 0 0 1
chrX:65740954|65741131 hsa-miR-1291 0 0 1
chrX:65740954|65741131 hsa-miR-1266-5p 0 0 1
chrX:65740954|65741131 hsa-miR-1266-3p 0 0 1
chrX:65740954|65741131 hsa-miR-1321 0 0 1
chrX:65740954|65741131 hsa-miR-125a-3p 0 0 1
chrX:65740954|65741131 hsa-miR-296-5p 0 0 1
chrX:65740954|65741131 hsa-miR-146b-3p 0 0 1
chrX:65740954|65741131 hsa-miR-320b 0 1 1
chrX:65740954|65741131 hsa-miR-320c 0 1 1
chrX:65740954|65741131 hsa-miR-483-3p 0 0 1
chrX:65740954|65741131 hsa-miR-320d 0 1 1
chrX:65740954|65741131 hsa-miR-19b 0 0 1
chrX:65740954|65741131 hsa-miR-514 0 0 1
chrX:65740954|65741131 hsa-miR-596 1 0 0
chrX:65740954|65741131 hsa-miR-612 1 0 0
chrX:65740954|65741131 hsa-miR-3174 0 1 0
chrX:65740954|65741131 hsa-miR-4322 1 0 0
chrX:65740954|65741131 hsa-miR-4265 1 0 0
chrX:65740954|65741131 hsa-miR-4429 0 1 0
chrX:65740954|65741131 hsa-miR-4656 1 0 0
chrX:65740954|65741131 hsa-miR-4739 1 0 0
chrX:65740954|65741131 hsa-miR-5698 1 0 0
chrX:65740954|65741131 hsa-miR-6127 1 0 0
chrX:65740954|65741131 hsa-miR-8077 0 1 0
chrX:65740954|65741131 hsa-miR-6747-3p 1 0 0
chrX:65740954|65741131 hsa-miR-4708-5p 1 0 0
chrX:65740954|65741131 hsa-miR-6881-3p 0 1 0
chrX:65740954|65741131 hsa-miR-139-3p 1 0 0
chrX:65740954|65741131 hsa-miR-6746-5p 1 0 0
chrX:65740954|65741131 hsa-miR-6741-5p 1 0 0
chrX:65740954|65741131 hsa-miR-6842-3p 0 1 0
chrX:65740954|65741131 hsa-miR-6759-5p 1 0 0
chrX:65740954|65741131 hsa-miR-1915-5p 1 0 0
chrX:65740954|65741131 hsa-miR-6832-3p 0 1 0
chrX:65740954|65741131 hsa-miR-877-3p 0 1 0
chrX:65740954|65741131 hsa-miR-6732-5p 1 0 0
chrX:65740954|65741131 hsa-miR-6735-3p 1 0 0
chrX:65740954|65741131 hsa-miR-6882-3p 1 0 0
chrX:65740954|65741131 hsa-miR-939-3p 1 0 0
chrX:65740954|65741131 hsa-miR-4786-3p 1 0 0
chrX:65740954|65741131 hsa-miR-30c-2-3p 1 1 0
chrX:65740954|65741131 hsa-miR-5001-3p 1 0 0
chrX:65740954|65741131 hsa-miR-149-3p 1 0 0
chrX:65740954|65741131 hsa-miR-3162-5p 0 1 0
chrX:65740954|65741131 hsa-miR-574-5p 1 0 0
chrX:65740954|65741131 hsa-miR-211-5p 0 1 0
chrX:65740954|65741131 hsa-miR-6811-3p 1 1 0
chrX:65740954|65741131 hsa-miR-519d-5p 0 1 0
chrX:65740954|65741131 hsa-miR-1296-5p 1 0 0
chrX:65740954|65741131 hsa-miR-1914-5p 1 1 0
chrX:65740954|65741131 hsa-miR-5088-3p 1 0 0
chrX:65740954|65741131 hsa-miR-6880-3p 1 0 0
chrX:65740954|65741131 hsa-miR-6883-3p 1 0 0
chrX:65740954|65741131 hsa-miR-1229-3p 0 1 0
chrX:65740954|65741131 hsa-miR-3173-5p 0 1 0
chrX:65740954|65741131 hsa-miR-6838-3p 1 0 0
chrX:65740954|65741131 hsa-miR-3152-5p 1 1 0
chrX:65740954|65741131 hsa-miR-6812-5p 1 0 0
chrX:65740954|65741131 hsa-miR-6803-5p 1 0 0
chrX:65740954|65741131 hsa-miR-7110-5p 1 0 0
chrX:65740954|65741131 hsa-miR-1249-5p 1 0 0
chrX:65740954|65741131 hsa-miR-6751-5p 1 0 0
chrX:65740954|65741131 hsa-miR-6763-5p 1 0 0
chrX:65740954|65741131 hsa-miR-3127-3p 0 1 0
chrX:65740954|65741131 hsa-miR-6777-5p 1 0 0
chrX:65740954|65741131 hsa-miR-4758-5p 1 0 0
chrX:65740954|65741131 hsa-miR-6856-5p 1 0 0
chrX:65740954|65741131 hsa-miR-6877-3p 1 0 0
chrX:65740954|65741131 hsa-miR-6756-3p 0 1 0
chrX:65740954|65741131 hsa-miR-6775-3p 1 1 0
chrX:65740954|65741131 hsa-miR-6819-3p 1 0 0
chrX:65740954|65741131 hsa-miR-6891-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:65740954|65741131
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MSNRGRAQSPLWRGVMRRGFWSPERVE
Nucleotide Sequence TTGTCAAACAGAGGCAGGGCCCAGTCACCTCTTTGGAGGGGAGTGATGAGAAGGGGATTTTGGTCACCTGAGAGGGTTGAGTAA
CircID chrX:65740954|65741131
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MRGLSKLGSGHRLLSPYSAFCTHSLVEPTGIK
Nucleotide Sequence CTGAGAGGGTTGAGTAAACTTGGATCAGGGCACAGGCTTCTCTCACCATACTCAGCTTTTTGCACTCACTCCCTAGTTGAGCCTACTGGCATCAAG
CircID chrX:65740954|65741131
ORF Type ORF3
Protein Length 45
Nucleotide Length 135
Protein Sequence MSMVREACALIQVYSTLSGDQNPLLITPLQRGDWALPLFDKPLTQ
Nucleotide Sequence CTGAGTATGGTGAGAGAAGCCTGTGCCCTGATCCAAGTTTACTCAACCCTCTCAGGTGACCAAAATCCCCTTCTCATCACTCCCCTCCAAAGAGGTGACTGGGCCCTGCCTCTGTTTGACAAACCTCTAACCCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab