CircRNA Information

General Information
circRNA Basic Information
CircID chrX:68722434|68722565
Strand -
CircType exon
Host Gene ENSG00000130052.12;
Algorism CIRI2;
Sequence ATGGTGCTGCAGCTGTGCAGCTCCTACAGCGCAGCTGAGCTCAGCCCTCCCGGCCCAGCCCTGGCTGAGCTGCGTCAGGCCCAAGCTGCAGGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:68722434|68722565 hsa-miR-29a-5p 0 0 1
chrX:68722434|68722565 hsa-miR-29a-3p 0 0 1
chrX:68722434|68722565 hsa-miR-107 0 0 1
chrX:68722434|68722565 hsa-miR-29c-5p 0 0 1
chrX:68722434|68722565 hsa-miR-29c-3p 0 0 1
chrX:68722434|68722565 hsa-miR-484 0 0 1
chrX:68722434|68722565 hsa-miR-558 0 0 1
chrX:68722434|68722565 hsa-miR-635 0 1 1
chrX:68722434|68722565 hsa-miR-1301-5p 0 0 1
chrX:68722434|68722565 hsa-miR-1301-3p 0 0 1
chrX:68722434|68722565 hsa-miR-708-5p 0 0 1
chrX:68722434|68722565 hsa-miR-708-3p 0 0 1
chrX:68722434|68722565 hsa-miR-1236-5p 0 0 1
chrX:68722434|68722565 hsa-miR-1236-3p 0 0 1
chrX:68722434|68722565 hsa-miR-767-5p 0 0 1
chrX:68722434|68722565 hsa-miR-1184 0 1 1
chrX:68722434|68722565 hsa-miR-28-5p 0 1 1
chrX:68722434|68722565 hsa-miR-1207-3p 0 0 1
chrX:68722434|68722565 hsa-miR-103 0 0 1
chrX:68722434|68722565 hsa-miR-24 0 0 1
chrX:68722434|68722565 hsa-miR-29b 0 0 1
chrX:68722434|68722565 hsa-miR-612 1 0 0
chrX:68722434|68722565 hsa-miR-623 1 0 0
chrX:68722434|68722565 hsa-miR-661 1 0 0
chrX:68722434|68722565 hsa-miR-762 1 1 0
chrX:68722434|68722565 hsa-miR-2861 0 1 0
chrX:68722434|68722565 hsa-miR-3139 0 1 0
chrX:68722434|68722565 hsa-miR-4453 0 1 0
chrX:68722434|68722565 hsa-miR-4492 0 1 0
chrX:68722434|68722565 hsa-miR-4498 1 1 0
chrX:68722434|68722565 hsa-miR-4505 1 1 0
chrX:68722434|68722565 hsa-miR-4507 1 0 0
chrX:68722434|68722565 hsa-miR-4508 1 0 0
chrX:68722434|68722565 hsa-miR-1587 1 1 0
chrX:68722434|68722565 hsa-miR-4538 1 0 0
chrX:68722434|68722565 hsa-miR-4656 0 1 0
chrX:68722434|68722565 hsa-miR-4663 0 1 0
chrX:68722434|68722565 hsa-miR-4741 1 0 0
chrX:68722434|68722565 hsa-miR-5787 1 1 0
chrX:68722434|68722565 hsa-miR-12116 0 1 0
chrX:68722434|68722565 hsa-miR-3157-5p 0 1 0
chrX:68722434|68722565 hsa-miR-6861-5p 1 0 0
chrX:68722434|68722565 hsa-miR-6854-5p 0 1 0
chrX:68722434|68722565 hsa-miR-6787-3p 0 1 0
chrX:68722434|68722565 hsa-miR-2467-5p 0 1 0
chrX:68722434|68722565 hsa-miR-3934-3p 0 1 0
chrX:68722434|68722565 hsa-miR-3944-3p 1 0 0
chrX:68722434|68722565 hsa-miR-296-3p 1 0 0
chrX:68722434|68722565 hsa-miR-6771-5p 1 1 0
chrX:68722434|68722565 hsa-miR-6823-5p 1 0 0
chrX:68722434|68722565 hsa-miR-6749-5p 1 0 0
chrX:68722434|68722565 hsa-miR-4446-3p 0 1 0
chrX:68722434|68722565 hsa-miR-149-3p 1 1 0
chrX:68722434|68722565 hsa-miR-937-5p 1 0 0
chrX:68722434|68722565 hsa-miR-6781-5p 0 1 0
chrX:68722434|68722565 hsa-miR-6877-5p 1 0 0
chrX:68722434|68722565 hsa-miR-3189-3p 0 1 0
chrX:68722434|68722565 hsa-miR-3670 0 1 0
chrX:68722434|68722565 hsa-miR-5001-5p 1 1 0
chrX:68722434|68722565 hsa-miR-6756-5p 1 0 0
chrX:68722434|68722565 hsa-miR-6774-5p 0 1 0
chrX:68722434|68722565 hsa-miR-3620-5p 1 1 0
chrX:68722434|68722565 hsa-miR-4728-5p 0 1 0
chrX:68722434|68722565 hsa-miR-10396a-5p 1 0 0
chrX:68722434|68722565 hsa-miR-10396b-5p 1 0 0
chrX:68722434|68722565 hsa-miR-4685-5p 1 1 0
chrX:68722434|68722565 hsa-miR-6846-5p 1 0 0
chrX:68722434|68722565 hsa-miR-6848-5p 1 0 0
chrX:68722434|68722565 hsa-miR-6724-5p 1 0 0
chrX:68722434|68722565 hsa-miR-6791-5p 1 0 0
chrX:68722434|68722565 hsa-miR-6837-5p 0 1 0
chrX:68722434|68722565 hsa-miR-6783-3p 1 1 0
chrX:68722434|68722565 hsa-miR-376b-5p 1 1 0
chrX:68722434|68722565 hsa-miR-376c-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:68722434|68722565
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MVLQLCSSYSAAELSPPGPALAELRQAQAAGVSLSLYMEENIQD
Nucleotide Sequence ATGGTGCTGCAGCTGTGCAGCTCCTACAGCGCAGCTGAGCTCAGCCCTCCCGGCCCAGCCCTGGCTGAGCTGCGTCAGGCCCAAGCTGCAGGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGAC
CircID chrX:68722434|68722565
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MDILFHVEAQAYPCSLGLTQLSQGWAGRAELSCAVGAAQLQHH
Nucleotide Sequence CTGGATATTCTCTTCCATGTAGAGGCTCAGGCTTACCCCTGCAGCTTGGGCCTGACGCAGCTCAGCCAGGGCTGGGCCGGGAGGGCTGAGCTCAGCTGCGCTGTAGGAGCTGCACAGCTGCAGCACCAT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab