CircRNA Information

General Information
circRNA Basic Information
CircID chrX:68841487|68841657
Strand +
CircType exon
Host Gene ENSG00000090776.5;
Algorism CIRI2;
Sequence CCGCTTAGGTCTCCACCCTGGGCCTCTGTTTCCCCACCAGGCCAAAGGATGCCAAAGGTAAGGAGAGAACAGGGTGGGGGGTGGGGGTGAAACTCCCAGCTCTGCAGGGCAAATAGCCACCTGGGCACCTCACCTCCCTCCACCCCCCATGAGGTCATCTGCCTGCAGCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:68841487|68841657 hsa-miR-96-5p 0 0 1
chrX:68841487|68841657 hsa-miR-96-3p 0 0 1
chrX:68841487|68841657 hsa-miR-10a-5p 0 0 1
chrX:68841487|68841657 hsa-miR-10a-3p 0 0 1
chrX:68841487|68841657 hsa-miR-10b-5p 0 0 1
chrX:68841487|68841657 hsa-miR-10b-3p 0 0 1
chrX:68841487|68841657 hsa-miR-182-5p 0 0 1
chrX:68841487|68841657 hsa-miR-182-3p 0 0 1
chrX:68841487|68841657 hsa-miR-608 0 1 1
chrX:68841487|68841657 hsa-miR-1271-5p 0 0 1
chrX:68841487|68841657 hsa-miR-1271-3p 0 0 1
chrX:68841487|68841657 hsa-miR-874-5p 0 0 1
chrX:68841487|68841657 hsa-miR-874-3p 0 0 1
chrX:68841487|68841657 hsa-miR-541-5p 0 0 1
chrX:68841487|68841657 hsa-miR-541-3p 0 0 1
chrX:68841487|68841657 hsa-miR-1205 0 0 1
chrX:68841487|68841657 hsa-miR-1294 0 0 1
chrX:68841487|68841657 hsa-miR-1321 0 1 1
chrX:68841487|68841657 hsa-miR-769-5p 0 0 1
chrX:68841487|68841657 hsa-miR-491-5p 0 0 1
chrX:68841487|68841657 hsa-miR-146b-3p 0 0 1
chrX:68841487|68841657 hsa-miR-654-5p 0 0 1
chrX:68841487|68841657 hsa-miR-501-5p 0 1 1
chrX:68841487|68841657 hsa-miR-1274b 0 0 1
chrX:68841487|68841657 hsa-miR-1308 0 0 1
chrX:68841487|68841657 hsa-miR-2110 0 1 0
chrX:68841487|68841657 hsa-miR-4261 0 1 0
chrX:68841487|68841657 hsa-miR-3937 1 0 0
chrX:68841487|68841657 hsa-miR-4510 0 1 0
chrX:68841487|68841657 hsa-miR-4642 1 1 0
chrX:68841487|68841657 hsa-miR-4651 0 1 0
chrX:68841487|68841657 hsa-miR-4710 1 1 0
chrX:68841487|68841657 hsa-miR-4739 1 1 0
chrX:68841487|68841657 hsa-miR-6127 0 1 0
chrX:68841487|68841657 hsa-miR-6129 0 1 0
chrX:68841487|68841657 hsa-miR-6132 0 1 0
chrX:68841487|68841657 hsa-miR-6133 0 1 0
chrX:68841487|68841657 hsa-miR-6745 0 1 0
chrX:68841487|68841657 hsa-miR-12114 0 1 0
chrX:68841487|68841657 hsa-miR-26b-3p 0 1 0
chrX:68841487|68841657 hsa-miR-7106-5p 1 0 0
chrX:68841487|68841657 hsa-miR-6825-5p 0 1 0
chrX:68841487|68841657 hsa-miR-125a-3p 1 1 0
chrX:68841487|68841657 hsa-miR-6799-5p 1 0 0
chrX:68841487|68841657 hsa-miR-6089 1 0 0
chrX:68841487|68841657 hsa-miR-6880-5p 0 1 0
chrX:68841487|68841657 hsa-miR-7847-3p 0 1 0
chrX:68841487|68841657 hsa-miR-6806-5p 1 0 0
chrX:68841487|68841657 hsa-miR-6845-3p 0 1 0
chrX:68841487|68841657 hsa-miR-6796-5p 1 0 0
chrX:68841487|68841657 hsa-miR-6782-5p 0 1 0
chrX:68841487|68841657 hsa-miR-5008-5p 0 1 0
chrX:68841487|68841657 hsa-miR-3934-3p 1 0 0
chrX:68841487|68841657 hsa-miR-7109-5p 1 1 0
chrX:68841487|68841657 hsa-miR-1266-3p 0 1 0
chrX:68841487|68841657 hsa-miR-149-3p 1 0 0
chrX:68841487|68841657 hsa-miR-3158-5p 0 1 0
chrX:68841487|68841657 hsa-miR-3678-3p 0 1 0
chrX:68841487|68841657 hsa-miR-1245b-3p 0 1 0
chrX:68841487|68841657 hsa-miR-6865-3p 0 1 0
chrX:68841487|68841657 hsa-miR-6802-3p 0 1 0
chrX:68841487|68841657 hsa-miR-6732-3p 0 1 0
chrX:68841487|68841657 hsa-miR-3162-3p 0 1 0
chrX:68841487|68841657 hsa-miR-6726-5p 1 0 0
chrX:68841487|68841657 hsa-miR-6752-5p 1 1 0
chrX:68841487|68841657 hsa-miR-6756-5p 1 1 0
chrX:68841487|68841657 hsa-miR-6803-5p 1 0 0
chrX:68841487|68841657 hsa-miR-6851-5p 1 1 0
chrX:68841487|68841657 hsa-miR-7107-5p 1 0 0
chrX:68841487|68841657 hsa-miR-7110-5p 0 1 0
chrX:68841487|68841657 hsa-miR-1249-5p 1 1 0
chrX:68841487|68841657 hsa-miR-6751-5p 1 0 0
chrX:68841487|68841657 hsa-miR-6797-5p 0 1 0
chrX:68841487|68841657 hsa-miR-328-5p 1 0 0
chrX:68841487|68841657 hsa-miR-4649-5p 1 0 0
chrX:68841487|68841657 hsa-miR-939-5p 1 1 0
chrX:68841487|68841657 hsa-miR-6511b-5p 0 1 0
chrX:68841487|68841657 hsa-miR-3085-5p 1 0 0
chrX:68841487|68841657 hsa-miR-3198 1 0 0
chrX:68841487|68841657 hsa-miR-6799-3p 1 0 0
chrX:68841487|68841657 hsa-miR-3689d 0 1 0
chrX:68841487|68841657 hsa-miR-6805-3p 1 0 0
chrX:68841487|68841657 hsa-miR-10394-5p 0 1 0
chrX:68841487|68841657 hsa-miR-4768-5p 0 1 0
chrX:68841487|68841657 hsa-miR-6764-5p 0 1 0
chrX:68841487|68841657 hsa-miR-6811-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:68841487|68841657
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MGLCFPTRPKDAKGKERTGWGVGVKLPALQGK
Nucleotide Sequence CTGGGCCTCTGTTTCCCCACCAGGCCAAAGGATGCCAAAGGTAAGGAGAGAACAGGGTGGGGGGTGGGGGTGAAACTCCCAGCTCTGCAGGGCAAATAG
CircID chrX:68841487|68841657
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MGVSPPPPTLFSPYLWHPLAWWGNRGPGWRPKR
Nucleotide Sequence CTGGGAGTTTCACCCCCACCCCCCACCCTGTTCTCTCCTTACCTTTGGCATCCTTTGGCCTGGTGGGGAAACAGAGGCCCAGGGTGGAGACCTAAGCGG
CircID chrX:68841487|68841657
ORF Type ORF3
Protein Length 52
Nucleotide Length 156
Protein Sequence MTSWGVEGGEVPRWLFALQSWEFHPHPPPCSLLTFGILWPGGETEAQGGDLS
Nucleotide Sequence ATGACCTCATGGGGGGTGGAGGGAGGTGAGGTGCCCAGGTGGCTATTTGCCCTGCAGAGCTGGGAGTTTCACCCCCACCCCCCACCCTGTTCTCTCCTTACCTTTGGCATCCTTTGGCCTGGTGGGGAAACAGAGGCCCAGGGTGGAGACCTAAGC
CircID chrX:68841487|68841657
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MPCRAGSFTPTPHPVLSLPLASFGLVGKQRPRVET
Nucleotide Sequence TTGCCCTGCAGAGCTGGGAGTTTCACCCCCACCCCCCACCCTGTTCTCTCCTTACCTTTGGCATCCTTTGGCCTGGTGGGGAAACAGAGGCCCAGGGTGGAGACCTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab