CircRNA Information

General Information
circRNA Basic Information
CircID chrX:70502851|70503064
Strand -
CircType exon
Host Gene ENSG00000082458.10;
Algorism CIRI2;
Sequence ACACATTTGGGTTAGAAAATCTATGGAGACTTCATCAATGGTACTATGTTATTAGAGAAATGCTTTAATTTTCATATTCCAATCAGATGGCATCTTCTATCCCAGCTGGTTGGGAAGGGATTGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTGAGAGCTAGGAGGGGTCAGCCTGAGGCCGGAGAGGAAGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:70502851|70503064 hsa-miR-107 0 0 1
chrX:70502851|70503064 hsa-miR-130a-5p 0 0 1
chrX:70502851|70503064 hsa-miR-130a-3p 0 0 1
chrX:70502851|70503064 hsa-miR-136-5p 0 0 1
chrX:70502851|70503064 hsa-miR-136-3p 0 0 1
chrX:70502851|70503064 hsa-miR-301a-5p 0 0 1
chrX:70502851|70503064 hsa-miR-301a-3p 0 0 1
chrX:70502851|70503064 hsa-miR-130b-5p 0 0 1
chrX:70502851|70503064 hsa-miR-130b-3p 0 0 1
chrX:70502851|70503064 hsa-miR-335-5p 0 0 1
chrX:70502851|70503064 hsa-miR-335-3p 0 0 1
chrX:70502851|70503064 hsa-miR-484 1 0 1
chrX:70502851|70503064 hsa-miR-454-5p 0 0 1
chrX:70502851|70503064 hsa-miR-454-3p 0 0 1
chrX:70502851|70503064 hsa-miR-301b-5p 0 0 1
chrX:70502851|70503064 hsa-miR-301b-3p 0 0 1
chrX:70502851|70503064 hsa-miR-938 0 0 1
chrX:70502851|70503064 hsa-miR-513c-5p 0 0 1
chrX:70502851|70503064 hsa-miR-513c-3p 0 0 1
chrX:70502851|70503064 hsa-miR-509-3p 0 0 1
chrX:70502851|70503064 hsa-miR-1207-3p 0 0 1
chrX:70502851|70503064 hsa-miR-188-5p 0 0 1
chrX:70502851|70503064 hsa-miR-576-5p 0 0 1
chrX:70502851|70503064 hsa-miR-105 0 0 1
chrX:70502851|70503064 hsa-miR-103 0 0 1
chrX:70502851|70503064 hsa-miR-11399 1 0 0
chrX:70502851|70503064 hsa-miR-105-5p 0 1 0
chrX:70502851|70503064 hsa-miR-6749-3p 1 0 0
chrX:70502851|70503064 hsa-miR-4665-3p 1 0 0
chrX:70502851|70503064 hsa-miR-4728-3p 1 0 0
chrX:70502851|70503064 hsa-miR-6763-3p 1 0 0
chrX:70502851|70503064 hsa-miR-3944-3p 1 1 0
chrX:70502851|70503064 hsa-miR-3667-3p 1 1 0
chrX:70502851|70503064 hsa-miR-3191-5p 1 0 0
chrX:70502851|70503064 hsa-miR-6878-3p 1 0 0
chrX:70502851|70503064 hsa-miR-7111-3p 1 1 0
chrX:70502851|70503064 hsa-miR-6769a-3p 1 0 0
chrX:70502851|70503064 hsa-miR-1237-3p 1 0 0
chrX:70502851|70503064 hsa-miR-6734-3p 1 0 0
chrX:70502851|70503064 hsa-miR-6846-3p 0 1 0
chrX:70502851|70503064 hsa-miR-6800-3p 1 0 0
chrX:70502851|70503064 hsa-miR-6790-3p 1 0 0
chrX:70502851|70503064 hsa-miR-6756-3p 0 1 0
chrX:70502851|70503064 hsa-miR-3059-5p 1 1 0
chrX:70502851|70503064 hsa-miR-4723-3p 1 0 0
chrX:70502851|70503064 hsa-miR-619-5p 0 1 0
chrX:70502851|70503064 hsa-miR-4769-3p 0 1 0
chrX:70502851|70503064 hsa-miR-3922-3p 1 0 0
chrX:70502851|70503064 hsa-miR-514b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chrX:70502851|70503064
ORF Type ORF1
Protein Length 45
Nucleotide Length 138
Protein Sequence MLLEKCFNFHIPIRWHLLSQLVGKGLKMVASAALRALAFGHSLES
Nucleotide Sequence ATGTTATTAGAGAAATGCTTTAATTTTCATATTCCAATCAGATGGCATCTTCTATCCCAGCTGGTTGGGAAGGGATTGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTGAGAGCTAG

CircID chrX:70502851|70503064
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MASSIPAGWEGIEDGSKCCTKGTRIWSFS
Nucleotide Sequence ATGGCATCTTCTATCCCAGCTGGTTGGGAAGGGATTGAAGATGGTAGCAAGTGCTGCACTAAGGGCACTCGCATTTGGTCATTCTCTTGA

CircID chrX:70502851|70503064
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MTPPSSQENDQMRVPLVQHLLPSSIPSQPAGIEDAI
Nucleotide Sequence CTGACCCCTCCTAGCTCTCAAGAGAATGACCAAATGCGAGTGCCCTTAGTGCAGCACTTGCTACCATCTTCAATCCCTTCCCAACCAGCTGGGATAGAAGATGCCATCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites