CircRNA Information

General Information
circRNA Basic Information
CircID chrX:71124359|71125047
Strand +
CircType exon
Host Gene ENSG00000184634.14;
Algorism CIRI2;
Sequence CTCCTTCTCGACATCTGGCTTCTCAGGGGATGGACTGCCCTTCCCCTCACAGGGCATAGTAGGGGAGAACAACTGAGAGAAAGGTGAGAAAGCAGAACATGAGAAGAAGGAAAGTGGATGAGGGGGCAAAAAAACATGCCAAAAGCAGGCATAATGGGAAGATCCAAGGATCCAGATTCTGCCACGCTCAGGATTGAACTTACTGAGAAATCAGGCTTCTCCATGTCCTCAAAGAGAACACTGGAACTAGGGTCAATGTCCATAGATTCTGAGAGCCCTGGATCTTCCAGCTTGCTGCTGCTGCTGCCTTCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:71124359|71125047 hsa-miR-15a-5p 0 0 1
chrX:71124359|71125047 hsa-miR-15a-3p 0 0 1
chrX:71124359|71125047 hsa-miR-96-5p 0 0 1
chrX:71124359|71125047 hsa-miR-96-3p 0 0 1
chrX:71124359|71125047 hsa-miR-182-5p 0 0 1
chrX:71124359|71125047 hsa-miR-182-3p 0 0 1
chrX:71124359|71125047 hsa-miR-15b-5p 0 0 1
chrX:71124359|71125047 hsa-miR-15b-3p 0 0 1
chrX:71124359|71125047 hsa-miR-195-5p 0 0 1
chrX:71124359|71125047 hsa-miR-195-3p 0 0 1
chrX:71124359|71125047 hsa-miR-424-5p 0 0 1
chrX:71124359|71125047 hsa-miR-424-3p 0 0 1
chrX:71124359|71125047 hsa-miR-497-5p 0 0 1
chrX:71124359|71125047 hsa-miR-497-3p 0 0 1
chrX:71124359|71125047 hsa-miR-504-5p 0 0 1
chrX:71124359|71125047 hsa-miR-504-3p 0 0 1
chrX:71124359|71125047 hsa-miR-1271-5p 0 0 1
chrX:71124359|71125047 hsa-miR-1271-3p 0 0 1
chrX:71124359|71125047 hsa-miR-874-5p 0 0 1
chrX:71124359|71125047 hsa-miR-874-3p 0 0 1
chrX:71124359|71125047 hsa-miR-942-5p 0 0 1
chrX:71124359|71125047 hsa-miR-942-3p 0 0 1
chrX:71124359|71125047 hsa-miR-1229-5p 0 0 1
chrX:71124359|71125047 hsa-miR-1229-3p 0 0 1
chrX:71124359|71125047 hsa-miR-1237-5p 0 0 1
chrX:71124359|71125047 hsa-miR-1237-3p 0 0 1
chrX:71124359|71125047 hsa-miR-1200 0 0 1
chrX:71124359|71125047 hsa-miR-1294 0 0 1
chrX:71124359|71125047 hsa-miR-1304-5p 0 0 1
chrX:71124359|71125047 hsa-miR-1304-3p 0 0 1
chrX:71124359|71125047 hsa-miR-1248 0 0 1
chrX:71124359|71125047 hsa-miR-1253 0 0 1
chrX:71124359|71125047 hsa-miR-1825 0 0 1
chrX:71124359|71125047 hsa-miR-129-5p 0 0 1
chrX:71124359|71125047 hsa-miR-145-5p 0 0 1
chrX:71124359|71125047 hsa-miR-1224-5p 0 1 1
chrX:71124359|71125047 hsa-miR-146b-3p 0 0 1
chrX:71124359|71125047 hsa-miR-199a-5p 0 0 1
chrX:71124359|71125047 hsa-miR-423-5p 0 0 1
chrX:71124359|71125047 hsa-miR-532-5p 0 0 1
chrX:71124359|71125047 hsa-miR-331-3p 0 0 1
chrX:71124359|71125047 hsa-miR-199b-5p 0 0 1
chrX:71124359|71125047 hsa-miR-125a-5p 0 0 1
chrX:71124359|71125047 hsa-miR-362-5p 0 1 1
chrX:71124359|71125047 hsa-miR-455-3p 0 0 1
chrX:71124359|71125047 hsa-miR-125b 0 0 1
chrX:71124359|71125047 hsa-miR-16 0 0 1
chrX:71124359|71125047 hsa-miR-7 0 0 1
chrX:71124359|71125047 hsa-miR-1300 0 0 1
chrX:71124359|71125047 hsa-miR-1201 0 0 1
chrX:71124359|71125047 hsa-miR-133b 1 0 0
chrX:71124359|71125047 hsa-miR-650 1 0 0
chrX:71124359|71125047 hsa-miR-1281 1 0 0
chrX:71124359|71125047 hsa-miR-1913 1 0 0
chrX:71124359|71125047 hsa-miR-2117 0 1 0
chrX:71124359|71125047 hsa-miR-4313 1 0 0
chrX:71124359|71125047 hsa-miR-4319 0 1 0
chrX:71124359|71125047 hsa-miR-4273 0 1 0
chrX:71124359|71125047 hsa-miR-3615 1 0 0
chrX:71124359|71125047 hsa-miR-3714 0 1 0
chrX:71124359|71125047 hsa-miR-3921 1 0 0
chrX:71124359|71125047 hsa-miR-3937 1 0 0
chrX:71124359|71125047 hsa-miR-1268b 1 0 0
chrX:71124359|71125047 hsa-miR-4531 0 1 0
chrX:71124359|71125047 hsa-miR-4683 1 1 0
chrX:71124359|71125047 hsa-miR-4734 1 0 0
chrX:71124359|71125047 hsa-miR-6072 1 1 0
chrX:71124359|71125047 hsa-miR-6125 1 0 0
chrX:71124359|71125047 hsa-miR-6126 0 1 0
chrX:71124359|71125047 hsa-miR-9898 1 0 0
chrX:71124359|71125047 hsa-miR-6749-3p 1 0 0
chrX:71124359|71125047 hsa-miR-29a-5p 0 1 0
chrX:71124359|71125047 hsa-miR-3194-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6836-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6892-3p 1 0 0
chrX:71124359|71125047 hsa-miR-210-5p 1 0 0
chrX:71124359|71125047 hsa-miR-4695-5p 1 0 0
chrX:71124359|71125047 hsa-miR-6820-5p 1 0 0
chrX:71124359|71125047 hsa-miR-6873-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6845-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6783-5p 0 1 0
chrX:71124359|71125047 hsa-miR-6810-5p 0 1 0
chrX:71124359|71125047 hsa-miR-6882-3p 1 0 0
chrX:71124359|71125047 hsa-miR-5088-5p 0 1 0
chrX:71124359|71125047 hsa-miR-1226-5p 1 1 0
chrX:71124359|71125047 hsa-miR-4786-3p 0 1 0
chrX:71124359|71125047 hsa-miR-6894-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6803-3p 1 0 0
chrX:71124359|71125047 hsa-miR-4715-3p 1 0 0
chrX:71124359|71125047 hsa-miR-5004-3p 0 1 0
chrX:71124359|71125047 hsa-miR-5001-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6739-3p 1 1 0
chrX:71124359|71125047 hsa-miR-4646-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6870-3p 0 1 0
chrX:71124359|71125047 hsa-miR-4776-3p 1 0 0
chrX:71124359|71125047 hsa-miR-7106-3p 1 0 0
chrX:71124359|71125047 hsa-miR-629-3p 0 1 0
chrX:71124359|71125047 hsa-miR-6887-3p 1 0 0
chrX:71124359|71125047 hsa-miR-3160-5p 1 1 0
chrX:71124359|71125047 hsa-miR-6826-3p 1 0 0
chrX:71124359|71125047 hsa-miR-4749-3p 1 0 0
chrX:71124359|71125047 hsa-miR-328-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6795-3p 1 0 0
chrX:71124359|71125047 hsa-miR-5004-5p 0 1 0
chrX:71124359|71125047 hsa-miR-3124-3p 0 1 0
chrX:71124359|71125047 hsa-miR-1255b-2-3p 1 1 0
chrX:71124359|71125047 hsa-miR-5584-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6885-3p 1 0 0
chrX:71124359|71125047 hsa-miR-4797-3p 0 1 0
chrX:71124359|71125047 hsa-miR-133a-3p 1 0 0
chrX:71124359|71125047 hsa-miR-4716-5p 0 1 0
chrX:71124359|71125047 hsa-miR-4763-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6754-3p 1 0 0
chrX:71124359|71125047 hsa-miR-4685-5p 1 1 0
chrX:71124359|71125047 hsa-miR-4725-3p 0 1 0
chrX:71124359|71125047 hsa-miR-6735-5p 0 1 0
chrX:71124359|71125047 hsa-miR-34b-5p 0 1 0
chrX:71124359|71125047 hsa-miR-7843-5p 0 1 0
chrX:71124359|71125047 hsa-miR-10398-5p 1 0 0
chrX:71124359|71125047 hsa-miR-6762-5p 1 0 0
chrX:71124359|71125047 hsa-miR-6756-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6862-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6805-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6810-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6829-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6511b-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6891-3p 0 1 0
chrX:71124359|71125047 hsa-miR-6838-5p 1 1 0
chrX:71124359|71125047 hsa-miR-5195-3p 1 0 0
chrX:71124359|71125047 hsa-miR-6874-3p 1 1 0
chrX:71124359|71125047 hsa-miR-125b-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:71124359|71125047
ORF Type ORF1
Protein Length 65
Nucleotide Length 195
Protein Sequence MRGQKNMPKAGIMGRSKDPDSATLRIELTEKSGFSMSSKRTLELGSMSIDSESPGSSSLLLLLPS
Nucleotide Sequence ATGAGGGGGCAAAAAAACATGCCAAAAGCAGGCATAATGGGAAGATCCAAGGATCCAGATTCTGCCACGCTCAGGATTGAACTTACTGAGAAATCAGGCTTCTCCATGTCCTCAAAGAGAACACTGGAACTAGGGTCAATGTCCATAGATTCTGAGAGCCCTGGATCTTCCAGCTTGCTGCTGCTGCTGCCTTCA
CircID chrX:71124359|71125047
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MRRRKVDEGAKKHAKSRHNGKIQGSRFCHAQD
Nucleotide Sequence ATGAGAAGAAGGAAAGTGGATGAGGGGGCAAAAAAACATGCCAAAAGCAGGCATAATGGGAAGATCCAAGGATCCAGATTCTGCCACGCTCAGGATTGA
CircID chrX:71124359|71125047
ORF Type ORF3
Protein Length 96
Nucleotide Length 288
Protein Sequence MEDPGLSESMDIDPSSSVLFEDMEKPDFSVSSILSVAESGSLDLPIMPAFGMFFCPLIHFPSSHVLLSHLSLSCSPLLCPVRGRAVHPLRSQMSRR
Nucleotide Sequence CTGGAAGATCCAGGGCTCTCAGAATCTATGGACATTGACCCTAGTTCCAGTGTTCTCTTTGAGGACATGGAGAAGCCTGATTTCTCAGTAAGTTCAATCCTGAGCGTGGCAGAATCTGGATCCTTGGATCTTCCCATTATGCCTGCTTTTGGCATGTTTTTTTGCCCCCTCATCCACTTTCCTTCTTCTCATGTTCTGCTTTCTCACCTTTCTCTCAGTTGTTCTCCCCTACTATGCCCTGTGAGGGGAAGGGCAGTCCATCCCCTGAGAAGCCAGATGTCGAGAAGG
CircID chrX:71124359|71125047
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence LKAAAAASWKIQGSQNLWTLTLVPVFSLRTWRSLISQ
Nucleotide Sequence CTGAAGGCAGCAGCAGCAGCAAGCTGGAAGATCCAGGGCTCTCAGAATCTATGGACATTGACCCTAGTTCCAGTGTTCTCTTTGAGGACATGGAGAAGCCTGATTTCTCAGTAA
CircID chrX:71124359|71125047
ORF Type ORF5
Protein Length 42
Nucleotide Length 129
Protein Sequence MDPWIFPLCLLLACFFAPSSTFLLLMFCFLTFLSVVLPYYAL
Nucleotide Sequence CTGGATCCTTGGATCTTCCCATTATGCCTGCTTTTGGCATGTTTTTTTGCCCCCTCATCCACTTTCCTTCTTCTCATGTTCTGCTTTCTCACCTTTCTCTCAGTTGTTCTCCCCTACTATGCCCTGTGA
CircID chrX:71124359|71125047
ORF Type ORF6
Protein Length 43
Nucleotide Length 129
Protein Sequence MPPHPLSFFSCSAFSPFSQLFSPTMPCEGKGSPSPEKPDVEKE
Nucleotide Sequence TTGCCCCCTCATCCACTTTCCTTCTTCTCATGTTCTGCTTTCTCACCTTTCTCTCAGTTGTTCTCCCCTACTATGCCCTGTGAGGGGAAGGGCAGTCCATCCCCTGAGAAGCCAGATGTCGAGAAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab