CircRNA Information

General Information
circRNA Basic Information
CircID chrX:71132168|71132483
Strand +
CircType exon
Host Gene ENSG00000184634.14;
Algorism CIRI2;
Sequence CCTTCTCCAATTCTTCCCCAGCAGCCTTTAACACATGTCCCTGGACTGAGGTGGGCAGTTTAGCAATGAGGGGGGCCACCAGCCATACACCAGAGCGCTCTAGAGAGCTGGAGAACAGACAGAGGACACAGGGTCACAGGGGAGCCAGGCAAGGCTGGAACAATCTATCCTCTCCTTTCCCTGATGGACATGCTGGCATCTCCACGCATCTGATATCACTCACGCTACCAGCAGATAAACTCCTAAGGGGATGGGTCCTAACATGTTTCTATCCGACCTGAGCACAGGCTTGGTCTTGCTGCTGCTGGGCATGTTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:71132168|71132483 hsa-miR-15a-5p 0 0 1
chrX:71132168|71132483 hsa-miR-15a-3p 0 0 1
chrX:71132168|71132483 hsa-miR-10a-5p 0 0 1
chrX:71132168|71132483 hsa-miR-10a-3p 0 0 1
chrX:71132168|71132483 hsa-miR-10b-5p 0 0 1
chrX:71132168|71132483 hsa-miR-10b-3p 0 0 1
chrX:71132168|71132483 hsa-miR-15b-5p 0 0 1
chrX:71132168|71132483 hsa-miR-15b-3p 0 0 1
chrX:71132168|71132483 hsa-miR-149-5p 0 0 1
chrX:71132168|71132483 hsa-miR-149-3p 0 0 1
chrX:71132168|71132483 hsa-miR-195-5p 0 0 1
chrX:71132168|71132483 hsa-miR-195-3p 0 0 1
chrX:71132168|71132483 hsa-miR-135b-5p 0 0 1
chrX:71132168|71132483 hsa-miR-135b-3p 0 0 1
chrX:71132168|71132483 hsa-miR-424-5p 0 0 1
chrX:71132168|71132483 hsa-miR-424-3p 0 0 1
chrX:71132168|71132483 hsa-miR-494-5p 0 0 1
chrX:71132168|71132483 hsa-miR-494-3p 0 0 1
chrX:71132168|71132483 hsa-miR-497-5p 0 0 1
chrX:71132168|71132483 hsa-miR-497-3p 0 0 1
chrX:71132168|71132483 hsa-miR-504-5p 0 0 1
chrX:71132168|71132483 hsa-miR-504-3p 0 0 1
chrX:71132168|71132483 hsa-miR-620 0 0 1
chrX:71132168|71132483 hsa-miR-661 0 0 1
chrX:71132168|71132483 hsa-miR-766-5p 0 0 1
chrX:71132168|71132483 hsa-miR-766-3p 0 0 1
chrX:71132168|71132483 hsa-miR-1202 0 0 1
chrX:71132168|71132483 hsa-miR-663b 1 0 1
chrX:71132168|71132483 hsa-miR-1251-5p 0 0 1
chrX:71132168|71132483 hsa-miR-1251-3p 0 0 1
chrX:71132168|71132483 hsa-miR-1258 0 0 1
chrX:71132168|71132483 hsa-miR-548g-5p 0 0 1
chrX:71132168|71132483 hsa-miR-548g-3p 0 0 1
chrX:71132168|71132483 hsa-miR-1270 0 0 1
chrX:71132168|71132483 hsa-miR-361-5p 0 0 1
chrX:71132168|71132483 hsa-miR-1224-3p 0 0 1
chrX:71132168|71132483 hsa-miR-331-3p 0 0 1
chrX:71132168|71132483 hsa-miR-338-3p 0 0 1
chrX:71132168|71132483 hsa-miR-518d-5p 0 0 1
chrX:71132168|71132483 hsa-miR-519b-5p 0 0 1
chrX:71132168|71132483 hsa-miR-519c-5p 0 0 1
chrX:71132168|71132483 hsa-miR-520c-5p 0 0 1
chrX:71132168|71132483 hsa-miR-455-3p 0 0 1
chrX:71132168|71132483 hsa-miR-515-5p 0 0 1
chrX:71132168|71132483 hsa-miR-16 0 0 1
chrX:71132168|71132483 hsa-miR-138 0 0 1
chrX:71132168|71132483 hsa-miR-135a 0 0 1
chrX:71132168|71132483 hsa-miR-1254 0 0 1
chrX:71132168|71132483 hsa-miR-526a 0 0 1
chrX:71132168|71132483 hsa-miR-1185 0 0 1
chrX:71132168|71132483 hsa-miR-133b 1 0 0
chrX:71132168|71132483 hsa-miR-4449 1 0 0
chrX:71132168|71132483 hsa-miR-4456 1 0 0
chrX:71132168|71132483 hsa-miR-3689f 1 0 0
chrX:71132168|71132483 hsa-miR-4686 1 0 0
chrX:71132168|71132483 hsa-miR-5787 1 0 0
chrX:71132168|71132483 hsa-miR-8075 1 0 0
chrX:71132168|71132483 hsa-miR-12128 1 0 0
chrX:71132168|71132483 hsa-miR-138-5p 1 0 0
chrX:71132168|71132483 hsa-miR-370-3p 1 0 0
chrX:71132168|71132483 hsa-miR-4731-5p 1 0 0
chrX:71132168|71132483 hsa-miR-4687-3p 1 0 0
chrX:71132168|71132483 hsa-miR-6799-5p 1 0 0
chrX:71132168|71132483 hsa-miR-3692-5p 1 0 0
chrX:71132168|71132483 hsa-miR-4722-5p 1 0 0
chrX:71132168|71132483 hsa-miR-296-5p 1 0 0
chrX:71132168|71132483 hsa-miR-6742-5p 1 0 0
chrX:71132168|71132483 hsa-miR-6829-5p 1 0 0
chrX:71132168|71132483 hsa-miR-6798-5p 1 0 0
chrX:71132168|71132483 hsa-miR-6853-5p 1 0 0
chrX:71132168|71132483 hsa-miR-6763-3p 1 0 0
chrX:71132168|71132483 hsa-miR-4783-3p 1 0 0
chrX:71132168|71132483 hsa-miR-4640-5p 1 0 0
chrX:71132168|71132483 hsa-miR-3691-5p 1 0 0
chrX:71132168|71132483 hsa-miR-146b-3p 1 0 0
chrX:71132168|71132483 hsa-miR-6769a-3p 1 0 0
chrX:71132168|71132483 hsa-miR-6743-3p 1 0 0
chrX:71132168|71132483 hsa-miR-6818-5p 1 0 0
chrX:71132168|71132483 hsa-miR-4749-3p 1 0 0
chrX:71132168|71132483 hsa-miR-328-3p 1 0 0
chrX:71132168|71132483 hsa-miR-133a-3p 1 0 0
chrX:71132168|71132483 hsa-miR-6769b-5p 1 0 0
chrX:71132168|71132483 hsa-miR-6812-5p 1 0 0
chrX:71132168|71132483 hsa-miR-6775-5p 1 0 0
chrX:71132168|71132483 hsa-miR-6754-5p 1 0 0
chrX:71132168|71132483 hsa-miR-4685-5p 1 0 0
chrX:71132168|71132483 hsa-miR-4701-3p 1 0 0
chrX:71132168|71132483 hsa-miR-1238-5p 1 0 0
chrX:71132168|71132483 hsa-miR-4758-5p 1 0 0
chrX:71132168|71132483 hsa-miR-10398-5p 1 0 0
chrX:71132168|71132483 hsa-miR-9851-5p 1 0 0
chrX:71132168|71132483 hsa-miR-6775-3p 1 0 0
chrX:71132168|71132483 hsa-miR-5195-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:71132168|71132483
ORF Type ORF1
Protein Length 71
Nucleotide Length 216
Protein Sequence MRGATSHTPERSRELENRQRTQGHRGARQGWNNLSSPFPDGHAGISTHLISLTLPADKLLRGWVLTCFYPT
Nucleotide Sequence ATGAGGGGGGCCACCAGCCATACACCAGAGCGCTCTAGAGAGCTGGAGAACAGACAGAGGACACAGGGTCACAGGGGAGCCAGGCAAGGCTGGAACAATCTATCCTCTCCTTTCCCTGATGGACATGCTGGCATCTCCACGCATCTGATATCACTCACGCTACCAGCAGATAAACTCCTAAGGGGATGGGTCCTAACATGTTTCTATCCGACCTGA
CircID chrX:71132168|71132483
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MFSSSLERSGVWLVAPLIAKLPTSVQGHVLKAAGEELEK
Nucleotide Sequence CTGTTCTCCAGCTCTCTAGAGCGCTCTGGTGTATGGCTGGTGGCCCCCCTCATTGCTAAACTGCCCACCTCAGTCCAGGGACATGTGTTAAAGGCTGCTGGGGAAGAATTGGAGAAG
CircID chrX:71132168|71132483
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MPSSSKTKPVLRSDRNMLGPIPLGVYLLVA
Nucleotide Sequence ATGCCCAGCAGCAGCAAGACCAAGCCTGTGCTCAGGTCGGATAGAAACATGTTAGGACCCATCCCCTTAGGAGTTTATCTGCTGGTAGCGTGA
CircID chrX:71132168|71132483
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MPGSPVTLCPLSVLQLSRALWCMAGGPPHC
Nucleotide Sequence TTGCCTGGCTCCCCTGTGACCCTGTGTCCTCTGTCTGTTCTCCAGCTCTCTAGAGCGCTCTGGTGTATGGCTGGTGGCCCCCCTCATTGCTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab