CircRNA Information

General Information
circRNA Basic Information
CircID chrX:71224262|71224577
Strand -
CircType exon
Host Gene ENSG00000169562.9;
Algorism CIRI2;
Sequence CGAGAAAACCGTCTTCACCGTCTTCATGCTAGCTGCCTCTGGCATCTGCATCATCCTCAATGTGGCCGAGGTGGTGTACCTCATCATCCGGGCCTGTGCCCGCCGAGCCCAGCGCCGCTCCAATCCACCTTCCCGCAAGGGCTCGGGCTTCGGCCACCGCCTCTCACCTGAATACAAGCAGAATGAGATCAACAAGCTGCTGAGTGAGCAGGATGGCTCCCTGAAAGACATACTGCGCCGCAGCCCTGGCACCGGGGCTGGGCTGGCTGAAAAGAGCGACCGCTGCTCGGCCTGCTGATGCCACATACCAGGCAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:71224262|71224577 hsa-let-7b-5p 0 0 1
chrX:71224262|71224577 hsa-let-7b-3p 0 0 1
chrX:71224262|71224577 hsa-let-7c-5p 0 0 1
chrX:71224262|71224577 hsa-let-7c-3p 0 0 1
chrX:71224262|71224577 hsa-let-7d-5p 0 0 1
chrX:71224262|71224577 hsa-let-7d-3p 0 0 1
chrX:71224262|71224577 hsa-let-7e-5p 0 0 1
chrX:71224262|71224577 hsa-let-7e-3p 0 0 1
chrX:71224262|71224577 hsa-miR-98-5p 0 0 1
chrX:71224262|71224577 hsa-miR-98-3p 0 0 1
chrX:71224262|71224577 hsa-miR-214-5p 0 0 1
chrX:71224262|71224577 hsa-miR-214-3p 0 0 1
chrX:71224262|71224577 hsa-let-7g-5p 0 0 1
chrX:71224262|71224577 hsa-let-7g-3p 0 0 1
chrX:71224262|71224577 hsa-let-7i-5p 0 0 1
chrX:71224262|71224577 hsa-let-7i-3p 0 0 1
chrX:71224262|71224577 hsa-miR-370-5p 0 0 1
chrX:71224262|71224577 hsa-miR-370-3p 0 0 1
chrX:71224262|71224577 hsa-miR-511-5p 0 0 1
chrX:71224262|71224577 hsa-miR-511-3p 0 0 1
chrX:71224262|71224577 hsa-miR-202-5p 0 0 1
chrX:71224262|71224577 hsa-miR-202-3p 0 0 1
chrX:71224262|71224577 hsa-miR-503-5p 0 0 1
chrX:71224262|71224577 hsa-miR-503-3p 0 0 1
chrX:71224262|71224577 hsa-miR-604 -10 0 1
chrX:71224262|71224577 hsa-miR-621 -6 0 1
chrX:71224262|71224577 hsa-miR-630 -8 0 1
chrX:71224262|71224577 hsa-miR-643 -5 0 1
chrX:71224262|71224577 hsa-miR-646 -8 0 1
chrX:71224262|71224577 hsa-miR-661 -13 0 1
chrX:71224262|71224577 hsa-miR-653-5p 0 0 1
chrX:71224262|71224577 hsa-miR-653-3p 0 0 1
chrX:71224262|71224577 hsa-miR-922 -2 0 1
chrX:71224262|71224577 hsa-miR-1178-5p 0 0 1
chrX:71224262|71224577 hsa-miR-1178-3p 0 0 1
chrX:71224262|71224577 hsa-miR-1272 -7 1 1
chrX:71224262|71224577 hsa-miR-1307-5p 0 0 1
chrX:71224262|71224577 hsa-miR-1307-3p 0 0 1
chrX:71224262|71224577 hsa-miR-1322 -7 0 1
chrX:71224262|71224577 hsa-miR-1827 -11 1 1
chrX:71224262|71224577 hsa-miR-512-5p -6 0 1
chrX:71224262|71224577 hsa-miR-125a-3p -13 0 1
chrX:71224262|71224577 hsa-miR-1224-5p -12 0 1
chrX:71224262|71224577 hsa-miR-615-3p -7 0 1
chrX:71224262|71224577 hsa-miR-299-3p -11 0 1
chrX:71224262|71224577 hsa-miR-654-3p -4 0 1
chrX:71224262|71224577 hsa-miR-767-3p -5 0 1
chrX:71224262|71224577 hsa-miR-220b 0 0 1
chrX:71224262|71224577 hsa-miR-1233 0 0 1
chrX:71224262|71224577 hsa-let-7a 0 0 1
chrX:71224262|71224577 hsa-let-7f 0 0 1
chrX:71224262|71224577 hsa-miR-1254 0 0 1
chrX:71224262|71224577 hsa-miR-129-3p 0 0 1
chrX:71224262|71224577 hsa-miR-1185 0 0 1
chrX:71224262|71224577 hsa-miR-1469 -7 1 0
chrX:71224262|71224577 hsa-miR-1538 -10 1 0
chrX:71224262|71224577 hsa-miR-4270 -6 1 0
chrX:71224262|71224577 hsa-miR-3665 -19 1 0
chrX:71224262|71224577 hsa-miR-378g -4 1 0
chrX:71224262|71224577 hsa-miR-4674 -13 1 0
chrX:71224262|71224577 hsa-miR-4706 -30 1 0
chrX:71224262|71224577 hsa-miR-5685 -2 1 0
chrX:71224262|71224577 hsa-miR-8060 -10 1 0
chrX:71224262|71224577 hsa-miR-222-5p -10 1 0
chrX:71224262|71224577 hsa-miR-4747-3p -9 1 0
chrX:71224262|71224577 hsa-miR-3157-5p -6 1 0
chrX:71224262|71224577 hsa-miR-6829-5p -10 1 0
chrX:71224262|71224577 hsa-miR-6827-5p -8 1 0
chrX:71224262|71224577 hsa-miR-5006-5p -12 1 0
chrX:71224262|71224577 hsa-miR-6858-3p -7 1 0
chrX:71224262|71224577 hsa-miR-4793-5p -16 1 0
chrX:71224262|71224577 hsa-miR-4783-3p -16 1 0
chrX:71224262|71224577 hsa-miR-4690-5p -11 1 0
chrX:71224262|71224577 hsa-miR-1250-5p -11 1 0
chrX:71224262|71224577 hsa-miR-4774-5p -7 1 0
chrX:71224262|71224577 hsa-miR-5196-5p -25 1 0
chrX:71224262|71224577 hsa-miR-6836-5p -4 1 0
chrX:71224262|71224577 hsa-miR-4685-5p -12 1 0
chrX:71224262|71224577 hsa-miR-3085-5p -14 1 0
chrX:71224262|71224577 hsa-miR-3940-5p -18 1 0
chrX:71224262|71224577 hsa-miR-1271-3p 0 1 0
chrX:71224262|71224577 hsa-miR-4747-5p -19 1 0
chrX:71224262|71224577 hsa-miR-541-3p -14 1 0
chrX:71224262|71224577 hsa-miR-10400-3p -7 1 0
chrX:71224262|71224577 hsa-miR-3619-5p -18 1 0
chrX:71224262|71224577 hsa-miR-4690-3p -4 1 0
chrX:71224262|71224577 hsa-miR-374c-3p -8 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:71224262|71224577
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MHHPQCGRGGVPHHPGLCPPSPAPLQSTFPQGLGLRPPPLT
Nucleotide Sequence CTGCATCATCCTCAATGTGGCCGAGGTGGTGTACCTCATCATCCGGGCCTGTGCCCGCCGAGCCCAGCGCCGCTCCAATCCACCTTCCCGCAAGGGCTCGGGCTTCGGCCACCGCCTCTCACCTGA
CircID chrX:71224262|71224577
ORF Type ORF2
Protein Length 90
Nucleotide Length 273
Protein Sequence MLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLSPEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
Nucleotide Sequence ATGCTAGCTGCCTCTGGCATCTGCATCATCCTCAATGTGGCCGAGGTGGTGTACCTCATCATCCGGGCCTGTGCCCGCCGAGCCCAGCGCCGCTCCAATCCACCTTCCCGCAAGGGCTCGGGCTTCGGCCACCGCCTCTCACCTGAATACAAGCAGAATGAGATCAACAAGCTGCTGAGTGAGCAGGATGGCTCCCTGAAAGACATACTGCGCCGCAGCCCTGGCACCGGGGCTGGGCTGGCTGAAAAGAGCGACCGCTGCTCGGCCTGCTGA
CircID chrX:71224262|71224577
ORF Type ORF3
Protein Length 56
Nucleotide Length 171
Protein Sequence MPLASASSSMWPRWCTSSSGPVPAEPSAAPIHLPARARASATASHLNTSRMRSTSC
Nucleotide Sequence CTGCCTCTGGCATCTGCATCATCCTCAATGTGGCCGAGGTGGTGTACCTCATCATCCGGGCCTGTGCCCGCCGAGCCCAGCGCCGCTCCAATCCACCTTCCCGCAAGGGCTCGGGCTTCGGCCACCGCCTCTCACCTGAATACAAGCAGAATGAGATCAACAAGCTGCTGA
CircID chrX:71224262|71224577
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MGSAGTGPDDEVHHLGHIEDDADARGS
Nucleotide Sequence CTGGGCTCGGCGGGCACAGGCCCGGATGATGAGGTACACCACCTCGGCCACATTGAGGATGATGCAGATGCCAGAGGCAGCTAG
CircID chrX:71224262|71224577
ORF Type ORF5
Protein Length 105
Nucleotide Length 315
Protein Sequence LPGMWHQQAEQRSLFSASPAPVPGLRRSMSFREPSCSLSSLLISFCLYSGERRWPKPEPLREGGLERRWARRAQARMMRYTTSATLRMMQMPEAASMKTVKTVFS
Nucleotide Sequence TTGCCTGGTATGTGGCATCAGCAGGCCGAGCAGCGGTCGCTCTTTTCAGCCAGCCCAGCCCCGGTGCCAGGGCTGCGGCGCAGTATGTCTTTCAGGGAGCCATCCTGCTCACTCAGCAGCTTGTTGATCTCATTCTGCTTGTATTCAGGTGAGAGGCGGTGGCCGAAGCCCGAGCCCTTGCGGGAAGGTGGATTGGAGCGGCGCTGGGCTCGGCGGGCACAGGCCCGGATGATGAGGTACACCACCTCGGCCACATTGAGGATGATGCAGATGCCAGAGGCAGCTAGCATGAAGACGGTGAAGACGGTTTTCTCG
CircID chrX:71224262|71224577
ORF Type ORF6
Protein Length 40
Nucleotide Length 123
Protein Sequence MVCGISRPSSGRSFQPAQPRCQGCGAVCLSGSHPAHSAAC
Nucleotide Sequence CTGGTATGTGGCATCAGCAGGCCGAGCAGCGGTCGCTCTTTTCAGCCAGCCCAGCCCCGGTGCCAGGGCTGCGGCGCAGTATGTCTTTCAGGGAGCCATCCTGCTCACTCAGCAGCTTGTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab