CircRNA Information

General Information
circRNA Basic Information
CircID chrX:74532078|74532261
Strand -
CircType exon
Host Gene ENSG00000147100.8;
Algorism CIRI2;
Sequence TGGGTACAAGCAGTGCCCTTATTGTATGGTTGGTTAACAGTCTGCTCCCCTCTTCCCTTCCTTCTTTTTTTCCTCTACTGACTTCTCTCCATACTCTTTCCCCTCTATTTCTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:74532078|74532261 hsa-miR-185-5p 0 0 1
chrX:74532078|74532261 hsa-miR-185-3p 0 0 1
chrX:74532078|74532261 hsa-miR-328-5p 0 0 1
chrX:74532078|74532261 hsa-miR-328-3p 0 0 1
chrX:74532078|74532261 hsa-miR-425-5p 0 0 1
chrX:74532078|74532261 hsa-miR-425-3p 0 0 1
chrX:74532078|74532261 hsa-miR-498-5p 0 0 1
chrX:74532078|74532261 hsa-miR-498-3p 0 0 1
chrX:74532078|74532261 hsa-miR-877-5p 0 0 1
chrX:74532078|74532261 hsa-miR-877-3p 0 0 1
chrX:74532078|74532261 hsa-miR-936 1 1 1
chrX:74532078|74532261 hsa-miR-939-5p 0 0 1
chrX:74532078|74532261 hsa-miR-939-3p 0 0 1
chrX:74532078|74532261 hsa-miR-1252-5p 0 0 1
chrX:74532078|74532261 hsa-miR-1252-3p 0 0 1
chrX:74532078|74532261 hsa-miR-485-5p 0 0 1
chrX:74532078|74532261 hsa-miR-509-3p 0 0 1
chrX:74532078|74532261 hsa-miR-338-5p 0 0 1
chrX:74532078|74532261 hsa-miR-524-5p 0 0 1
chrX:74532078|74532261 hsa-miR-199b-3p 0 0 1
chrX:74532078|74532261 hsa-miR-199a-3p 0 0 1
chrX:74532078|74532261 hsa-miR-485-3p 0 0 1
chrX:74532078|74532261 hsa-miR-520d-5p 0 0 1
chrX:74532078|74532261 hsa-miR-1248 0 1 0
chrX:74532078|74532261 hsa-miR-1275 1 0 0
chrX:74532078|74532261 hsa-miR-3132 1 0 0
chrX:74532078|74532261 hsa-miR-3138 1 0 0
chrX:74532078|74532261 hsa-miR-3141 1 0 0
chrX:74532078|74532261 hsa-miR-3153 0 1 0
chrX:74532078|74532261 hsa-miR-3154 1 1 0
chrX:74532078|74532261 hsa-miR-3175 1 0 0
chrX:74532078|74532261 hsa-miR-3185 1 0 0
chrX:74532078|74532261 hsa-miR-3188 1 0 0
chrX:74532078|74532261 hsa-miR-4306 0 1 0
chrX:74532078|74532261 hsa-miR-4316 0 1 0
chrX:74532078|74532261 hsa-miR-4271 1 0 0
chrX:74532078|74532261 hsa-miR-4290 0 1 0
chrX:74532078|74532261 hsa-miR-3916 1 1 0
chrX:74532078|74532261 hsa-miR-4476 1 1 0
chrX:74532078|74532261 hsa-miR-4494 0 1 0
chrX:74532078|74532261 hsa-miR-4496 1 0 0
chrX:74532078|74532261 hsa-miR-4533 1 0 0
chrX:74532078|74532261 hsa-miR-4656 1 0 0
chrX:74532078|74532261 hsa-miR-4658 1 0 0
chrX:74532078|74532261 hsa-miR-4689 1 0 0
chrX:74532078|74532261 hsa-miR-4706 1 0 0
chrX:74532078|74532261 hsa-miR-4739 1 1 0
chrX:74532078|74532261 hsa-miR-4784 1 0 0
chrX:74532078|74532261 hsa-miR-5090 1 0 0
chrX:74532078|74532261 hsa-miR-5093 1 0 0
chrX:74532078|74532261 hsa-miR-5703 1 0 0
chrX:74532078|74532261 hsa-miR-5739 1 0 0
chrX:74532078|74532261 hsa-miR-6077 0 1 0
chrX:74532078|74532261 hsa-miR-6081 1 1 0
chrX:74532078|74532261 hsa-miR-6090 1 0 0
chrX:74532078|74532261 hsa-miR-6124 1 1 0
chrX:74532078|74532261 hsa-miR-7515 1 1 0
chrX:74532078|74532261 hsa-miR-8085 1 0 0
chrX:74532078|74532261 hsa-miR-9500 0 1 0
chrX:74532078|74532261 hsa-miR-10226 0 1 0
chrX:74532078|74532261 hsa-miR-12115 1 0 0
chrX:74532078|74532261 hsa-miR-12118 1 0 0
chrX:74532078|74532261 hsa-miR-12120 1 0 0
chrX:74532078|74532261 hsa-miR-4433b-3p 1 0 0
chrX:74532078|74532261 hsa-miR-6734-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6765-5p 1 0 0
chrX:74532078|74532261 hsa-miR-7106-5p 1 1 0
chrX:74532078|74532261 hsa-miR-6894-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6799-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6510-5p 1 0 0
chrX:74532078|74532261 hsa-miR-5187-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6873-5p 1 1 0
chrX:74532078|74532261 hsa-miR-7847-3p 1 1 0
chrX:74532078|74532261 hsa-miR-4695-5p 1 0 0
chrX:74532078|74532261 hsa-miR-4709-3p 1 0 0
chrX:74532078|74532261 hsa-miR-197-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6716-5p 1 0 0
chrX:74532078|74532261 hsa-miR-1292-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6827-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6760-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6881-5p 1 0 0
chrX:74532078|74532261 hsa-miR-3150b-3p 1 0 0
chrX:74532078|74532261 hsa-miR-6835-5p 1 0 0
chrX:74532078|74532261 hsa-miR-7109-5p 1 0 0
chrX:74532078|74532261 hsa-miR-3944-3p 1 0 0
chrX:74532078|74532261 hsa-miR-92b-5p 1 0 0
chrX:74532078|74532261 hsa-miR-4732-5p 1 0 0
chrX:74532078|74532261 hsa-miR-3202 1 1 0
chrX:74532078|74532261 hsa-miR-4667-3p 0 1 0
chrX:74532078|74532261 hsa-miR-149-3p 1 0 0
chrX:74532078|74532261 hsa-miR-4668-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6830-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6824-5p 1 0 0
chrX:74532078|74532261 hsa-miR-5584-5p 1 0 0
chrX:74532078|74532261 hsa-miR-423-5p 1 0 0
chrX:74532078|74532261 hsa-miR-616-3p 1 0 0
chrX:74532078|74532261 hsa-miR-873-3p 1 0 0
chrX:74532078|74532261 hsa-miR-6832-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6871-3p 0 1 0
chrX:74532078|74532261 hsa-miR-483-5p 1 0 0
chrX:74532078|74532261 hsa-miR-4771 0 1 0
chrX:74532078|74532261 hsa-miR-1207-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6812-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6803-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6813-5p 1 0 0
chrX:74532078|74532261 hsa-miR-11181-3p 1 0 0
chrX:74532078|74532261 hsa-miR-1249-5p 1 1 0
chrX:74532078|74532261 hsa-miR-6751-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6779-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6780a-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6797-5p 1 1 0
chrX:74532078|74532261 hsa-miR-6808-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6879-5p 1 0 0
chrX:74532078|74532261 hsa-miR-4728-5p 1 1 0
chrX:74532078|74532261 hsa-miR-5196-5p 1 1 0
chrX:74532078|74532261 hsa-miR-6780b-5p 1 1 0
chrX:74532078|74532261 hsa-miR-10526-3p 1 0 0
chrX:74532078|74532261 hsa-miR-4649-5p 1 0 0
chrX:74532078|74532261 hsa-miR-4725-3p 1 0 0
chrX:74532078|74532261 hsa-miR-6735-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6738-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6795-5p 1 1 0
chrX:74532078|74532261 hsa-miR-6848-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6858-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6887-5p 1 1 0
chrX:74532078|74532261 hsa-miR-4723-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6831-5p 1 0 0
chrX:74532078|74532261 hsa-miR-30c-1-3p 1 0 0
chrX:74532078|74532261 hsa-miR-6758-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6856-5p 1 0 0
chrX:74532078|74532261 hsa-miR-3173-3p 1 0 0
chrX:74532078|74532261 hsa-miR-6891-5p 1 1 0
chrX:74532078|74532261 hsa-miR-4716-3p 1 0 0
chrX:74532078|74532261 hsa-miR-6750-5p 1 0 0
chrX:74532078|74532261 hsa-miR-6859-5p 1 0 0
chrX:74532078|74532261 hsa-miR-627-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:74532078|74532261
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MVNSLLPSSLPSFFPLLTSLHTLSPLFLCMTVIDTWVLEERRDPELGPISL
Nucleotide Sequence TTGGTTAACAGTCTGCTCCCCTCTTCCCTTCCTTCTTTTTTTCCTCTACTGACTTCTCTCCATACTCTTTCCCCTCTATTTCTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTC
CircID chrX:74532078|74532261
ORF Type ORF2
Protein Length 59
Nucleotide Length 177
Protein Sequence MIGPSSGSLLSSSTHVSMTVIQRNRGERVWREVSRGKKEGREEGSRLLTNHTIRALLVP
Nucleotide Sequence CTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGAAATAGAGGGGAAAGAGTATGGAGAGAAGTCAGTAGAGGAAAAAAAGAAGGAAGGGAAGAGGGGAGCAGACTGTTAACCAACCATACAATAAGGGCACTGCTTGTACCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab