CircRNA Information

General Information
circRNA Basic Information
CircID chrX:77521317|77521495
Strand +
CircType exon
Host Gene ENSG00000085224.19;
Algorism CIRI2;
Sequence CTCATTAATCAAGGAAGAGAAAAAGTTGTAGAAGCAACAAACAGTGTGACAGCAGTGAGGATTCAACCTCTTGAGGATATAATTTCAGCTGTAGTAAGCTAATTGGCAATTGTCTTATTCCAACCTCCAATTTGTACCCTCCACCCCCTACTGCCATTTTTTTAAATTTTTAATTGTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:77521317|77521495 hsa-miR-21-5p 0 0 1
chrX:77521317|77521495 hsa-miR-21-3p 0 0 1
chrX:77521317|77521495 hsa-miR-34a-5p 0 0 1
chrX:77521317|77521495 hsa-miR-34a-3p 0 0 1
chrX:77521317|77521495 hsa-miR-335-5p 0 0 1
chrX:77521317|77521495 hsa-miR-335-3p 0 0 1
chrX:77521317|77521495 hsa-miR-449a 0 0 1
chrX:77521317|77521495 hsa-miR-452-5p 0 0 1
chrX:77521317|77521495 hsa-miR-452-3p 0 0 1
chrX:77521317|77521495 hsa-miR-608 1 0 1
chrX:77521317|77521495 hsa-miR-626 0 0 1
chrX:77521317|77521495 hsa-miR-641 0 0 1
chrX:77521317|77521495 hsa-miR-449b-5p 0 0 1
chrX:77521317|77521495 hsa-miR-449b-3p 0 0 1
chrX:77521317|77521495 hsa-miR-1236-5p 0 0 1
chrX:77521317|77521495 hsa-miR-1236-3p 0 0 1
chrX:77521317|77521495 hsa-miR-1208 0 0 1
chrX:77521317|77521495 hsa-miR-1283 0 0 1
chrX:77521317|77521495 hsa-miR-502-5p 0 0 1
chrX:77521317|77521495 hsa-miR-34c-5p 0 0 1
chrX:77521317|77521495 hsa-miR-590-5p 0 0 1
chrX:77521317|77521495 hsa-miR-548c-3p 0 0 1
chrX:77521317|77521495 hsa-miR-768-5p 0 0 1
chrX:77521317|77521495 hsa-miR-936 1 0 0
chrX:77521317|77521495 hsa-miR-1268a 1 0 0
chrX:77521317|77521495 hsa-miR-3154 1 0 0
chrX:77521317|77521495 hsa-miR-1268b 1 0 0
chrX:77521317|77521495 hsa-miR-4651 1 0 0
chrX:77521317|77521495 hsa-miR-6085 1 0 0
chrX:77521317|77521495 hsa-miR-6086 1 0 0
chrX:77521317|77521495 hsa-miR-7150 1 0 0
chrX:77521317|77521495 hsa-miR-12114 1 0 0
chrX:77521317|77521495 hsa-miR-6747-5p 1 0 0
chrX:77521317|77521495 hsa-miR-7106-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6894-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6515-5p 1 0 0
chrX:77521317|77521495 hsa-miR-7847-3p 1 0 0
chrX:77521317|77521495 hsa-miR-197-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6871-5p 1 0 0
chrX:77521317|77521495 hsa-miR-3180-3p 1 0 0
chrX:77521317|77521495 hsa-miR-6732-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6805-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6782-5p 1 0 0
chrX:77521317|77521495 hsa-miR-7109-5p 1 0 0
chrX:77521317|77521495 hsa-miR-885-3p 1 0 0
chrX:77521317|77521495 hsa-miR-4787-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6824-5p 1 0 0
chrX:77521317|77521495 hsa-miR-3162-5p 1 0 0
chrX:77521317|77521495 hsa-miR-4763-3p 1 0 0
chrX:77521317|77521495 hsa-miR-6769b-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6778-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6737-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6743-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6752-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6756-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6803-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6819-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6842-5p 1 0 0
chrX:77521317|77521495 hsa-miR-7110-5p 1 0 0
chrX:77521317|77521495 hsa-miR-1249-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6751-5p 1 0 0
chrX:77521317|77521495 hsa-miR-7111-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6794-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6846-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6848-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6883-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6887-5p 1 0 0
chrX:77521317|77521495 hsa-miR-6855-5p 1 0 0
chrX:77521317|77521495 hsa-miR-4472 1 0 0
chrX:77521317|77521495 hsa-miR-4716-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:77521317|77521495
ORF Type ORF1
Protein Length 50
Nucleotide Length 153
Protein Sequence MAVGGGGYKLEVGIRQLPISLLQLKLYPQEVESSLLSHCLLLLQLFLFLD
Nucleotide Sequence ATGGCAGTAGGGGGTGGAGGGTACAAATTGGAGGTTGGAATAAGACAATTGCCAATTAGCTTACTACAGCTGAAATTATATCCTCAAGAGGTTGAATCCTCACTGCTGTCACACTGTTTGTTGCTTCTACAACTTTTTCTCTTCCTTGATTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab