CircRNA Information

General Information
circRNA Basic Information
CircID chrX:77652114|77652281
Strand -
CircType exon
Host Gene ENSG00000085224.19;
Algorism CIRI2;
Sequence CTCTCTCAATTTTTCTCGCTCACGCTCCCTCTCAGCAATACGTTTTCGTCTCTCTTCCTCTTCCTTAAGAGCATTTTGTGTTTCTGTTCTCAGTTTATCATCTTTAAGAATCTTCCGAATTTTCTTTCTGCCTTTTCCAGGAGACTTGGAATCATCATTTTCATCTTC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:77652114|77652281 hsa-miR-137-5p 0 0 1
chrX:77652114|77652281 hsa-miR-137-3p 0 0 1
chrX:77652114|77652281 hsa-miR-146a-5p 0 0 1
chrX:77652114|77652281 hsa-miR-146a-3p 0 0 1
chrX:77652114|77652281 hsa-miR-589-5p 0 0 1
chrX:77652114|77652281 hsa-miR-589-3p 0 0 1
chrX:77652114|77652281 hsa-miR-548g-5p 0 0 1
chrX:77652114|77652281 hsa-miR-548g-3p 0 0 1
chrX:77652114|77652281 hsa-miR-1272 0 1 1
chrX:77652114|77652281 hsa-miR-875-3p 0 0 1
chrX:77652114|77652281 hsa-miR-628-5p 0 0 1
chrX:77652114|77652281 hsa-miR-146b-5p 0 0 1
chrX:77652114|77652281 hsa-miR-765 1 1 0
chrX:77652114|77652281 hsa-miR-298 1 0 0
chrX:77652114|77652281 hsa-miR-1268a 1 0 0
chrX:77652114|77652281 hsa-miR-3125 1 0 0
chrX:77652114|77652281 hsa-miR-3132 1 0 0
chrX:77652114|77652281 hsa-miR-3154 1 0 0
chrX:77652114|77652281 hsa-miR-3161 1 0 0
chrX:77652114|77652281 hsa-miR-3916 0 1 0
chrX:77652114|77652281 hsa-miR-1268b 1 0 0
chrX:77652114|77652281 hsa-miR-4428 1 0 0
chrX:77652114|77652281 hsa-miR-2392 1 0 0
chrX:77652114|77652281 hsa-miR-4510 1 0 0
chrX:77652114|77652281 hsa-miR-4647 1 0 0
chrX:77652114|77652281 hsa-miR-4689 1 0 0
chrX:77652114|77652281 hsa-miR-4698 0 1 0
chrX:77652114|77652281 hsa-miR-4706 1 0 0
chrX:77652114|77652281 hsa-miR-4739 1 0 0
chrX:77652114|77652281 hsa-miR-5698 1 0 0
chrX:77652114|77652281 hsa-miR-5703 1 0 0
chrX:77652114|77652281 hsa-miR-5739 1 0 0
chrX:77652114|77652281 hsa-miR-6070 1 0 0
chrX:77652114|77652281 hsa-miR-6088 1 0 0
chrX:77652114|77652281 hsa-miR-6090 1 1 0
chrX:77652114|77652281 hsa-miR-6124 1 1 0
chrX:77652114|77652281 hsa-miR-6127 1 1 0
chrX:77652114|77652281 hsa-miR-6129 1 1 0
chrX:77652114|77652281 hsa-miR-6130 0 1 0
chrX:77652114|77652281 hsa-miR-8085 1 0 0
chrX:77652114|77652281 hsa-miR-6734-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6894-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6833-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6807-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6880-5p 1 0 0
chrX:77652114|77652281 hsa-miR-7847-3p 1 0 0
chrX:77652114|77652281 hsa-miR-7160-5p 1 0 0
chrX:77652114|77652281 hsa-miR-197-5p 1 0 0
chrX:77652114|77652281 hsa-miR-7845-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6805-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6798-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6760-5p 0 1 0
chrX:77652114|77652281 hsa-miR-2467-3p 1 0 0
chrX:77652114|77652281 hsa-miR-1228-5p 1 0 0
chrX:77652114|77652281 hsa-miR-3202 1 0 0
chrX:77652114|77652281 hsa-miR-149-3p 1 0 0
chrX:77652114|77652281 hsa-miR-423-5p 1 0 0
chrX:77652114|77652281 hsa-miR-4773 0 1 0
chrX:77652114|77652281 hsa-miR-6761-5p 0 1 0
chrX:77652114|77652281 hsa-miR-580-3p 0 1 0
chrX:77652114|77652281 hsa-miR-1207-5p 1 0 0
chrX:77652114|77652281 hsa-miR-4763-3p 1 0 0
chrX:77652114|77652281 hsa-miR-1343-5p 1 0 0
chrX:77652114|77652281 hsa-miR-11181-3p 1 0 0
chrX:77652114|77652281 hsa-miR-1249-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6779-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6780a-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6797-5p 1 1 0
chrX:77652114|77652281 hsa-miR-6808-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6879-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6780b-5p 1 0 0
chrX:77652114|77652281 hsa-miR-10526-3p 1 0 0
chrX:77652114|77652281 hsa-miR-1237-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6729-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6735-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6794-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6858-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6883-5p 1 0 0
chrX:77652114|77652281 hsa-miR-4436b-3p 1 1 0
chrX:77652114|77652281 hsa-miR-4723-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6831-5p 1 0 0
chrX:77652114|77652281 hsa-miR-939-5p 1 0 0
chrX:77652114|77652281 hsa-miR-1238-5p 1 0 0
chrX:77652114|77652281 hsa-miR-4758-5p 1 0 0
chrX:77652114|77652281 hsa-miR-1910-3p 0 1 0
chrX:77652114|77652281 hsa-miR-6739-5p 0 1 0
chrX:77652114|77652281 hsa-miR-6758-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6856-5p 1 0 0
chrX:77652114|77652281 hsa-miR-4646-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6891-5p 1 1 0
chrX:77652114|77652281 hsa-miR-4716-3p 1 0 0
chrX:77652114|77652281 hsa-miR-6766-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6785-5p 1 0 0
chrX:77652114|77652281 hsa-miR-6790-5p 1 0 0
chrX:77652114|77652281 hsa-miR-20b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chrX:77652114|77652281
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MCFCSQFIIFKNLPNFLSAFSRRLGIIIFIF
Nucleotide Sequence TTGTGTTTCTGTTCTCAGTTTATCATCTTTAAGAATCTTCCGAATTTTCTTTCTGCCTTTTCCAGGAGACTTGGAATCATCATTTTCATCTTC
CircID chrX:77652114|77652281
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MRTETQNALKEEEERRKRIAEREREREKLRE
Nucleotide Sequence CTGAGAACAGAAACACAAAATGCTCTTAAGGAAGAGGAAGAGAGACGAAAACGTATTGCTGAGAGGGAGCGTGAGCGAGAAAAATTGAGAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab