CircRNA Information

General Information
circRNA Basic Information
CircID chrX:84096194|84120027
Strand -
CircType exon
Host Gene ENSG00000072133.10;
Algorism find_circ;CIRI2;DCC;
Sequence ATTTTGGACTCAGCAAGGAGTCAGTAGATCAAGAAAAGAAGGCTTACTCATTTTGTGGTACAGTAGAGTATATGGCTCCTGAAGTAGTAAATAGGAGAGGCCATTCCCAGAGTGCTGATTGGTGGTCATATGGTGTTCTTATGTTTGAAATGCTTACTGGTACTCTGCCATTTCAAGGTAAAGACAGAAATGAGACCATGAATATGATATTAAAAGCAAAACTTGGAATGCCTCAATTTCTTAGTGCTGAAGCACAAAGTCTTCTAAGGATGTTATTCAAAAGGAATCCAGCAAATAGATTGGGATCAGAAGGAGTTGAAGAAATCAAAAGACATCTGTTTTTTGCAAATATTGACTGGGATATCATTGACAAAAGTAAGCGAGACCCTTCAGAAGAGATTGAAATATTGATGCGCTATGGACAACATCCCAACATTATTACTTTGAAGGATGTCTTTGATGATGGTAGATATGTTTACCTTGTTACGGATTTAATGAAAGGAGGAGAGTTACTTGACCGTATTCTCAAACAAAAATGTTTCTCGGAACGGGAGGCTAGTGATATACTATATGTAATAAGTAAGACAGTTGACTATCTTCATTGTCAAGGAGTTGTTCATCGTGATCTTAAACCTAGTAATATTTTATACATGGATGAATCAGCCAGTGCAGATTCAATCAGGATATGTGATTTTGGGTTTGCAAAACAACTTCGAGGAGAAAATGGACTTCTCTTAACTCCATGCTACACTGCAAACTTTGTTGCACCTGAGGTTCTTATGCAACAGGGATATGATGCTGCTTGTGATATCTGGAGTTTAGGAGTCCTTTTTTACACAATGTTGGCTGGCTACACTCCATTTGCTAATGGCCCCAATGATACTCCTGAAGAGATACTGCTGCGTATAGGCAATGGAAAATTCTCTTTGAGTGGTGGAAACTGGGACAATATTTCAGACGGAGCAAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chrX:84096194|84120027
ORF Type ORF1
Protein Length 299
Nucleotide Length 897
Protein Sequence MAPEVVNRRGHSQSADWWSYGVLMFEMLTGTLPFQGKDRNETMNMILKAKLGMPQFLSAEAQSLLRMLFKRNPANRLGSEGVEEIKRHLFFANIDWDIIDKSKRDPSEEIEILMRYGQHPNIITLKDVFDDGRYVYLVTDLMKGGELLDRILKQKCFSEREASDILYVISKTVDYLHCQGVVHRDLKPSNILYMDESASADSIRICDFGFAKQLRGENGLLLTPCYTANFVAPEVLMQQGYDAACDIWSLGVLFYTMLAGYTPFANGPNDTPEEILLRIGNGKFSLSGGNWDNISDGAK
Nucleotide Sequence ATGGCTCCTGAAGTAGTAAATAGGAGAGGCCATTCCCAGAGTGCTGATTGGTGGTCATATGGTGTTCTTATGTTTGAAATGCTTACTGGTACTCTGCCATTTCAAGGTAAAGACAGAAATGAGACCATGAATATGATATTAAAAGCAAAACTTGGAATGCCTCAATTTCTTAGTGCTGAAGCACAAAGTCTTCTAAGGATGTTATTCAAAAGGAATCCAGCAAATAGATTGGGATCAGAAGGAGTTGAAGAAATCAAAAGACATCTGTTTTTTGCAAATATTGACTGGGATATCATTGACAAAAGTAAGCGAGACCCTTCAGAAGAGATTGAAATATTGATGCGCTATGGACAACATCCCAACATTATTACTTTGAAGGATGTCTTTGATGATGGTAGATATGTTTACCTTGTTACGGATTTAATGAAAGGAGGAGAGTTACTTGACCGTATTCTCAAACAAAAATGTTTCTCGGAACGGGAGGCTAGTGATATACTATATGTAATAAGTAAGACAGTTGACTATCTTCATTGTCAAGGAGTTGTTCATCGTGATCTTAAACCTAGTAATATTTTATACATGGATGAATCAGCCAGTGCAGATTCAATCAGGATATGTGATTTTGGGTTTGCAAAACAACTTCGAGGAGAAAATGGACTTCTCTTAACTCCATGCTACACTGCAAACTTTGTTGCACCTGAGGTTCTTATGCAACAGGGATATGATGCTGCTTGTGATATCTGGAGTTTAGGAGTCCTTTTTTACACAATGTTGGCTGGCTACACTCCATTTGCTAATGGCCCCAATGATACTCCTGAAGAGATACTGCTGCGTATAGGCAATGGAAAATTCTCTTTGAGTGGTGGAAACTGGGACAATATTTCAGACGGAGCAAAG

CircID chrX:84096194|84120027
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MISQSIFAKNRCLLISSTPSDPNLFAGFLLNNILRRLCASALRN*
Nucleotide Sequence ATGATATCCCAGTCAATATTTGCAAAAAACAGATGTCTTTTGATTTCTTCAACTCCTTCTGATCCCAATCTATTTGCTGGATTCCTTTTGAATAACATCCTTAGAAGACTTTGTGCTTCAGCACTAAGAAATTGA

CircID chrX:84096194|84120027
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MTTNQHSGNGLSYLLLQEPYTLLYHKMSKPSFLDLLTPC*
Nucleotide Sequence ATGACCACCAATCAGCACTCTGGGAATGGCCTCTCCTATTTACTACTTCAGGAGCCATATACTCTACTGTACCACAAAATGAGTAAGCCTTCTTTTCTTGATCTACTGACTCCTTGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chrX:84096194|84120027 NOP56 0 1 0
chrX:84096194|84120027 ELAVL1 2 4 0
chrX:84096194|84120027 U2AF2 2 0 0
chrX:84096194|84120027 CNBP 0 0 1
chrX:84096194|84120027 TAF15 0 1 0
chrX:84096194|84120027 FMR1 0 0 1
chrX:84096194|84120027 FBL 0 0 1
chrX:84096194|84120027 NOP58 3 2 2