CircRNA Information

General Information
circRNA Basic Information
CircID chrX:9714475|9714708
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGATTACTTATGCCTGCGGAATCTGCCACATTTGCGTGGATTCTGAGGCTGCACCCAGCTGAGGACTGATGGAGGCGGGAGACCATGGCAGTCACCTGCTGAGACTCAGACTCATCTGGTGGGTAAGTGGCTCATGGACTCTCCATCAGCACGACCAAAACTTTCTACAGACCTGTAAGGGCCATCCCTGACTCTTCCTACCCTTCCCGTCTCCTTCCCAGGGTCAGACTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrX:9714475|9714708 hsa-miR-214-5p 0 0 1
chrX:9714475|9714708 hsa-miR-214-3p 0 0 1
chrX:9714475|9714708 hsa-miR-134-5p 0 0 1
chrX:9714475|9714708 hsa-miR-134-3p 0 0 1
chrX:9714475|9714708 hsa-miR-185-5p 0 0 1
chrX:9714475|9714708 hsa-miR-185-3p 0 0 1
chrX:9714475|9714708 hsa-miR-328-5p 0 0 1
chrX:9714475|9714708 hsa-miR-328-3p 0 0 1
chrX:9714475|9714708 hsa-miR-133b 0 0 1
chrX:9714475|9714708 hsa-miR-504-5p 0 0 1
chrX:9714475|9714708 hsa-miR-504-3p 0 0 1
chrX:9714475|9714708 hsa-miR-552-5p 0 0 1
chrX:9714475|9714708 hsa-miR-552-3p 0 0 1
chrX:9714475|9714708 hsa-miR-561-5p 0 0 1
chrX:9714475|9714708 hsa-miR-561-3p 0 0 1
chrX:9714475|9714708 hsa-miR-600 0 0 1
chrX:9714475|9714708 hsa-miR-622 0 0 1
chrX:9714475|9714708 hsa-miR-627-5p 0 0 1
chrX:9714475|9714708 hsa-miR-627-3p 0 0 1
chrX:9714475|9714708 hsa-miR-922 0 0 1
chrX:9714475|9714708 hsa-miR-924 0 0 1
chrX:9714475|9714708 hsa-miR-938 0 0 1
chrX:9714475|9714708 hsa-miR-1291 0 0 1
chrX:9714475|9714708 hsa-miR-1281 0 0 1
chrX:9714475|9714708 hsa-miR-125a-3p 0 0 1
chrX:9714475|9714708 hsa-miR-483-5p 1 1 1
chrX:9714475|9714708 hsa-miR-1207-3p 0 0 1
chrX:9714475|9714708 hsa-miR-455-3p 0 1 1
chrX:9714475|9714708 hsa-miR-133a 0 0 1
chrX:9714475|9714708 hsa-miR-184 1 0 0
chrX:9714475|9714708 hsa-miR-623 1 0 0
chrX:9714475|9714708 hsa-miR-761 0 1 0
chrX:9714475|9714708 hsa-miR-765 1 0 0
chrX:9714475|9714708 hsa-miR-663b 1 0 0
chrX:9714475|9714708 hsa-miR-3132 1 0 0
chrX:9714475|9714708 hsa-miR-3154 1 0 0
chrX:9714475|9714708 hsa-miR-4256 0 1 0
chrX:9714475|9714708 hsa-miR-4271 1 0 0
chrX:9714475|9714708 hsa-miR-4428 1 1 0
chrX:9714475|9714708 hsa-miR-4476 1 0 0
chrX:9714475|9714708 hsa-miR-4510 1 0 0
chrX:9714475|9714708 hsa-miR-4516 1 0 0
chrX:9714475|9714708 hsa-miR-4533 1 0 0
chrX:9714475|9714708 hsa-miR-4651 1 0 0
chrX:9714475|9714708 hsa-miR-4660 1 0 0
chrX:9714475|9714708 hsa-miR-4689 1 0 0
chrX:9714475|9714708 hsa-miR-4739 1 1 0
chrX:9714475|9714708 hsa-miR-4748 0 1 0
chrX:9714475|9714708 hsa-miR-5092 0 1 0
chrX:9714475|9714708 hsa-miR-5194 1 0 0
chrX:9714475|9714708 hsa-miR-6077 0 1 0
chrX:9714475|9714708 hsa-miR-6090 1 0 0
chrX:9714475|9714708 hsa-miR-6127 1 0 0
chrX:9714475|9714708 hsa-miR-6129 1 0 0
chrX:9714475|9714708 hsa-miR-6133 1 0 0
chrX:9714475|9714708 hsa-miR-8052 1 0 0
chrX:9714475|9714708 hsa-miR-8065 0 1 0
chrX:9714475|9714708 hsa-miR-8072 1 0 0
chrX:9714475|9714708 hsa-miR-8075 1 1 0
chrX:9714475|9714708 hsa-miR-8085 1 0 0
chrX:9714475|9714708 hsa-miR-8089 1 0 0
chrX:9714475|9714708 hsa-miR-11399 1 0 0
chrX:9714475|9714708 hsa-miR-12118 1 0 0
chrX:9714475|9714708 hsa-miR-12128 1 1 0
chrX:9714475|9714708 hsa-miR-6765-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6861-5p 1 0 0
chrX:9714475|9714708 hsa-miR-7106-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6825-5p 1 0 0
chrX:9714475|9714708 hsa-miR-766-3p 1 0 0
chrX:9714475|9714708 hsa-miR-6799-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6728-5p 1 0 0
chrX:9714475|9714708 hsa-miR-139-3p 1 1 0
chrX:9714475|9714708 hsa-miR-6089 1 0 0
chrX:9714475|9714708 hsa-miR-7847-3p 1 0 0
chrX:9714475|9714708 hsa-miR-4695-5p 1 0 0
chrX:9714475|9714708 hsa-miR-197-5p 1 0 0
chrX:9714475|9714708 hsa-miR-5589-5p 0 1 0
chrX:9714475|9714708 hsa-miR-6776-5p 0 1 0
chrX:9714475|9714708 hsa-miR-7845-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6787-3p 0 1 0
chrX:9714475|9714708 hsa-miR-3180-3p 1 0 0
chrX:9714475|9714708 hsa-miR-6760-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6782-5p 0 1 0
chrX:9714475|9714708 hsa-miR-30b-3p 1 0 0
chrX:9714475|9714708 hsa-miR-204-3p 1 1 0
chrX:9714475|9714708 hsa-miR-1229-5p 1 0 0
chrX:9714475|9714708 hsa-miR-1228-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6771-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6749-5p 1 0 0
chrX:9714475|9714708 hsa-miR-3202 1 1 0
chrX:9714475|9714708 hsa-miR-149-3p 1 0 0
chrX:9714475|9714708 hsa-miR-937-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6800-5p 0 1 0
chrX:9714475|9714708 hsa-miR-3189-3p 1 0 0
chrX:9714475|9714708 hsa-miR-3191-3p 1 0 0
chrX:9714475|9714708 hsa-miR-2115-5p 0 1 0
chrX:9714475|9714708 hsa-miR-1207-5p 1 0 0
chrX:9714475|9714708 hsa-miR-1233-5p 1 0 0
chrX:9714475|9714708 hsa-miR-4763-3p 1 0 0
chrX:9714475|9714708 hsa-miR-6778-5p 1 0 0
chrX:9714475|9714708 hsa-miR-3180 1 0 0
chrX:9714475|9714708 hsa-miR-6737-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6743-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6756-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6769a-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6815-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6819-5p 1 0 0
chrX:9714475|9714708 hsa-miR-11181-3p 1 0 0
chrX:9714475|9714708 hsa-miR-1249-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6763-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6774-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6779-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6780a-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6797-5p 1 0 0
chrX:9714475|9714708 hsa-miR-7111-5p 1 0 0
chrX:9714475|9714708 hsa-miR-4728-5p 1 0 0
chrX:9714475|9714708 hsa-miR-5196-5p 1 1 0
chrX:9714475|9714708 hsa-miR-6780b-5p 1 0 0
chrX:9714475|9714708 hsa-miR-4725-3p 1 0 0
chrX:9714475|9714708 hsa-miR-6738-5p 1 1 0
chrX:9714475|9714708 hsa-miR-6858-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6883-5p 1 0 0
chrX:9714475|9714708 hsa-miR-4646-5p 1 1 0
chrX:9714475|9714708 hsa-miR-4747-5p 1 1 0
chrX:9714475|9714708 hsa-miR-6876-5p 1 1 0
chrX:9714475|9714708 hsa-miR-6891-5p 1 0 0
chrX:9714475|9714708 hsa-miR-6785-5p 1 0 0
chrX:9714475|9714708 hsa-miR-4667-5p 1 1 0
chrX:9714475|9714708 hsa-miR-6791-5p 1 1 0
chrX:9714475|9714708 hsa-miR-6829-3p 1 0 0
chrX:9714475|9714708 hsa-miR-6848-3p 0 1 0
chrX:9714475|9714708 hsa-miR-619-5p 1 0 0
chrX:9714475|9714708 hsa-miR-4769-3p 0 1 0
chrX:9714475|9714708 hsa-miR-10395-5p 0 1 0
chrX:9714475|9714708 hsa-miR-6843-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chrX:9714475|9714708
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MMEAGDHGSHLLRLRLIWWVSGSWTLHQHDQNFLQTCKGHP
Nucleotide Sequence CTGATGGAGGCGGGAGACCATGGCAGTCACCTGCTGAGACTCAGACTCATCTGGTGGGTAAGTGGCTCATGGACTCTCCATCAGCACGACCAAAACTTTCTACAGACCTGTAAGGGCCATCCCTGA
CircID chrX:9714475|9714708
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MRTDGGGRPWQSPAETQTHLVGKWLMDSPSARPKLSTDL
Nucleotide Sequence CTGAGGACTGATGGAGGCGGGAGACCATGGCAGTCACCTGCTGAGACTCAGACTCATCTGGTGGGTAAGTGGCTCATGGACTCTCCATCAGCACGACCAAAACTTTCTACAGACCTGTAA
CircID chrX:9714475|9714708
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MVSRLHQSSAGCSLRIHANVADSAGISNQ
Nucleotide Sequence ATGGTCTCCCGCCTCCATCAGTCCTCAGCTGGGTGCAGCCTCAGAATCCACGCAAATGTGGCAGATTCCGCAGGCATAAGTAATCAG
CircID chrX:9714475|9714708
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MPWSPASISPQLGAASESTQMWQIPQA
Nucleotide Sequence CTGCCATGGTCTCCCGCCTCCATCAGTCCTCAGCTGGGTGCAGCCTCAGAATCCACGCAAATGTGGCAGATTCCGCAGGCATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab