CircRNA Information

General Information
circRNA Basic Information
CircID chrY:19587210|19587507
Strand +
CircType exon
Host Gene ENSG00000131002.11;
Algorism find_circ;CIRI2;DCC;
Sequence TTTGTGAATAGCACAATGGAAGAAGCTGGACTTTGTGGGTTAAGAGAGAAAGCAGATATGTTGTGTAACTCTGAATCACATGATATTCTTCAACATCAAGACTCAAATTGCAGTGCCACAAGTAATAAACATTTATTGGAAGATGAAGAAGGCCGTGACTTTATAACAAAGAACAGGAGTTGGGTGAGCCCAGTGCACTGCACACAAGAGTCAAGAAGGGAGCTTCCTGAGCAAGAAGTAGCCCCTCCGTCTGGTCAGCAAGCTTTACAATGCAACAGGAACAAAGAAAAAGTCTTAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chrY:19587210|19587507 hsa-miR-148a-5p 0 0 1
chrY:19587210|19587507 hsa-miR-148a-3p 0 0 1
chrY:19587210|19587507 hsa-miR-152-5p 0 0 1
chrY:19587210|19587507 hsa-miR-152-3p 0 0 1
chrY:19587210|19587507 hsa-miR-148b-5p 0 0 1
chrY:19587210|19587507 hsa-miR-148b-3p 0 0 1
chrY:19587210|19587507 hsa-miR-422a 1 1 1
chrY:19587210|19587507 hsa-miR-495-5p 0 0 1
chrY:19587210|19587507 hsa-miR-495-3p 0 0 1
chrY:19587210|19587507 hsa-miR-545-5p 0 0 1
chrY:19587210|19587507 hsa-miR-545-3p 0 0 1
chrY:19587210|19587507 hsa-miR-562 0 0 1
chrY:19587210|19587507 hsa-miR-571 0 1 1
chrY:19587210|19587507 hsa-miR-618 0 0 1
chrY:19587210|19587507 hsa-miR-421 0 0 1
chrY:19587210|19587507 hsa-miR-758-5p 0 0 1
chrY:19587210|19587507 hsa-miR-758-3p 0 0 1
chrY:19587210|19587507 hsa-miR-1264 0 0 1
chrY:19587210|19587507 hsa-miR-888-5p 0 0 1
chrY:19587210|19587507 hsa-miR-888-3p 0 0 1
chrY:19587210|19587507 hsa-miR-190b-5p 0 0 1
chrY:19587210|19587507 hsa-miR-190b-3p 0 0 1
chrY:19587210|19587507 hsa-miR-873-5p 0 0 1
chrY:19587210|19587507 hsa-miR-873-3p 0 0 1
chrY:19587210|19587507 hsa-miR-920 0 1 1
chrY:19587210|19587507 hsa-miR-1227-5p 0 0 1
chrY:19587210|19587507 hsa-miR-1227-3p 0 0 1
chrY:19587210|19587507 hsa-miR-1200 0 1 1
chrY:19587210|19587507 hsa-miR-1257 0 0 1
chrY:19587210|19587507 hsa-miR-1262 0 0 1
chrY:19587210|19587507 hsa-miR-1825 0 0 1
chrY:19587210|19587507 hsa-miR-103a-2-5p 0 1 1
chrY:19587210|19587507 hsa-miR-141-5p 0 1 1
chrY:19587210|19587507 hsa-miR-1225-3p 0 0 1
chrY:19587210|19587507 hsa-miR-516a-3p 0 0 1
chrY:19587210|19587507 hsa-miR-1233 0 0 1
chrY:19587210|19587507 hsa-miR-7 0 0 1
chrY:19587210|19587507 hsa-miR-378 0 0 1
chrY:19587210|19587507 hsa-miR-768-3p 0 0 1
chrY:19587210|19587507 hsa-miR-190 0 0 1
chrY:19587210|19587507 hsa-miR-1291 1 0 0
chrY:19587210|19587507 hsa-miR-1470 0 1 0
chrY:19587210|19587507 hsa-miR-3125 1 0 0
chrY:19587210|19587507 hsa-miR-3132 1 0 0
chrY:19587210|19587507 hsa-miR-378b 1 1 0
chrY:19587210|19587507 hsa-miR-3154 1 1 0
chrY:19587210|19587507 hsa-miR-3164 0 1 0
chrY:19587210|19587507 hsa-miR-3185 1 1 0
chrY:19587210|19587507 hsa-miR-378c 1 1 0
chrY:19587210|19587507 hsa-miR-4259 0 1 0
chrY:19587210|19587507 hsa-miR-4266 1 0 0
chrY:19587210|19587507 hsa-miR-3652 1 0 0
chrY:19587210|19587507 hsa-miR-4429 1 0 0
chrY:19587210|19587507 hsa-miR-4430 1 0 0
chrY:19587210|19587507 hsa-miR-378h 1 0 0
chrY:19587210|19587507 hsa-miR-4533 1 0 0
chrY:19587210|19587507 hsa-miR-4656 1 0 0
chrY:19587210|19587507 hsa-miR-4739 1 0 0
chrY:19587210|19587507 hsa-miR-5093 1 0 0
chrY:19587210|19587507 hsa-miR-6077 1 0 0
chrY:19587210|19587507 hsa-miR-6088 1 0 0
chrY:19587210|19587507 hsa-miR-7974 1 0 0
chrY:19587210|19587507 hsa-miR-8058 0 1 0
chrY:19587210|19587507 hsa-miR-143-3p 1 0 0
chrY:19587210|19587507 hsa-miR-1287-5p 1 0 0
chrY:19587210|19587507 hsa-miR-4433a-3p 1 1 0
chrY:19587210|19587507 hsa-miR-6894-5p 1 1 0
chrY:19587210|19587507 hsa-miR-8071 1 0 0
chrY:19587210|19587507 hsa-miR-766-5p 1 0 0
chrY:19587210|19587507 hsa-miR-5187-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6089 1 0 0
chrY:19587210|19587507 hsa-miR-7847-3p 1 0 0
chrY:19587210|19587507 hsa-miR-4695-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6746-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6730-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6759-5p 1 1 0
chrY:19587210|19587507 hsa-miR-197-5p 1 0 0
chrY:19587210|19587507 hsa-miR-7845-5p 1 0 0
chrY:19587210|19587507 hsa-miR-3605-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6748-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6793-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6796-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6770-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6760-5p 1 1 0
chrY:19587210|19587507 hsa-miR-5008-5p 1 0 0
chrY:19587210|19587507 hsa-miR-185-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6784-5p 1 0 0
chrY:19587210|19587507 hsa-miR-30c-2-3p 1 0 0
chrY:19587210|19587507 hsa-miR-6878-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6769a-3p 0 1 0
chrY:19587210|19587507 hsa-miR-6866-5p 1 0 0
chrY:19587210|19587507 hsa-miR-7160-3p 1 0 0
chrY:19587210|19587507 hsa-miR-664b-5p 1 0 0
chrY:19587210|19587507 hsa-miR-4773 0 1 0
chrY:19587210|19587507 hsa-miR-6801-5p 1 0 0
chrY:19587210|19587507 hsa-miR-676-5p 0 1 0
chrY:19587210|19587507 hsa-miR-6812-5p 1 0 0
chrY:19587210|19587507 hsa-miR-1343-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6756-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6722-3p 0 1 0
chrY:19587210|19587507 hsa-miR-365a-5p 1 0 0
chrY:19587210|19587507 hsa-miR-3940-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6758-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6856-5p 1 1 0
chrY:19587210|19587507 hsa-miR-1199-5p 1 0 0
chrY:19587210|19587507 hsa-miR-6855-5p 1 0 0
chrY:19587210|19587507 hsa-miR-378a-3p 1 1 0
chrY:19587210|19587507 hsa-miR-320a-3p 1 0 0
chrY:19587210|19587507 hsa-miR-320b 1 0 0
chrY:19587210|19587507 hsa-miR-320c 1 0 0
chrY:19587210|19587507 hsa-miR-6884-5p 1 0 0
chrY:19587210|19587507 hsa-miR-320d 1 0 0
chrY:19587210|19587507 hsa-miR-99b-3p 1 0 0
chrY:19587210|19587507 hsa-miR-2682-5p 1 0 0
chrY:19587210|19587507 hsa-miR-302d-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chrY:19587210|19587507
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MWHCNLSLDVEEYHVIQSYTTYLLSLLTHKVQLLPLCYSQ
Nucleotide Sequence TTGTGGCACTGCAATTTGAGTCTTGATGTTGAAGAATATCATGTGATTCAGAGTTACACAACATATCTGCTTTCTCTCTTAACCCACAAAGTCCAGCTTCTTCCATTGTGCTATTCACAA

CircID chrY:19587210|19587507
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MFFVIKSRPSSSSNKCLLLVALQFES
Nucleotide Sequence CTGTTCTTTGTTATAAAGTCACGGCCTTCTTCATCTTCCAATAAATGTTTATTACTTGTGGCACTGCAATTTGAGTCTTGA

CircID chrY:19587210|19587507
ORF Type ORF3
Protein Length 94
Nucleotide Length 282
Protein Sequence MEEAGLCGLREKADMLCNSESHDILQHQDSNCSATSNKHLLEDEEGRDFITKNRSWVSPVHCTQESRRELPEQEVAPPSGQQALQCNRNKEKVL
Nucleotide Sequence ATGGAAGAAGCTGGACTTTGTGGGTTAAGAGAGAAAGCAGATATGTTGTGTAACTCTGAATCACATGATATTCTTCAACATCAAGACTCAAATTGCAGTGCCACAAGTAATAAACATTTATTGGAAGATGAAGAAGGCCGTGACTTTATAACAAAGAACAGGAGTTGGGTGAGCCCAGTGCACTGCACACAAGAGTCAAGAAGGGAGCTTCCTGAGCAAGAAGTAGCCCCTCCGTCTGGTCAGCAAGCTTTACAATGCAACAGGAACAAAGAAAAAGTCTTA

CircID chrY:19587210|19587507
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence MNHMIFFNIKTQIAVPQVINIYWKMKKAVTL
Nucleotide Sequence CTGAATCACATGATATTCTTCAACATCAAGACTCAAATTGCAGTGCCACAAGTAATAAACATTTATTGGAAGATGAAGAAGGCCGTGACTTTATAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chrY:19587210|19587507 SF3B4 1 3 0
chrY:19587210|19587507 FAM120A 0 1 1
chrY:19587210|19587507 CELF2 2 4 2
chrY:19587210|19587507 PRPF8 0 4 2
chrY:19587210|19587507 UPF1 0 1 0
chrY:19587210|19587507 TAF15 0 2 0
chrY:19587210|19587507 SRSF7 1 4 3
chrY:19587210|19587507 SRSF1 1 3 2
chrY:19587210|19587507 U2AF1 1 5 3
chrY:19587210|19587507 U2AF2 2 7 0
chrY:19587210|19587507 SRSF9 2 2 3
chrY:19587210|19587507 HNRNPK 1 2 0
chrY:19587210|19587507 HNRNPA2B1 0 4 3
chrY:19587210|19587507 SF3A3 1 3 1
chrY:19587210|19587507 HNRNPC 0 3 0
chrY:19587210|19587507 TRA2A 0 3 2
chrY:19587210|19587507 HNRNPM 5 0 0
chrY:19587210|19587507 HNRNPA1 0 1 0
chrY:19587210|19587507 SMNDC1 0 3 3
chrY:19587210|19587507 MSI1 0 1 0
chrY:19587210|19587507 ACIN1 0 0 1
chrY:19587210|19587507 BCCIP 1 1 2
chrY:19587210|19587507 SND1 0 2 1
chrY:19587210|19587507 GTF2F1 0 2 0
chrY:19587210|19587507 IGF2BP3 0 2 2
chrY:19587210|19587507 HNRNPUL1 0 6 0
chrY:19587210|19587507 BUD13 1 4 3
chrY:19587210|19587507 RBFOX2 0 1 2
chrY:19587210|19587507 SLTM 0 0 1
chrY:19587210|19587507 CSTF2T 2 2 1
chrY:19587210|19587507 TIA1 0 5 0