miRNA Card

miRNA General Information
miRNA ID hsa-miR-181b-3p
Description Homo sapiens miR-181b-1 stem-loop
Comment This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1]. Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning. Its expression was later verified in human BC-1 cells [3]. There are two predicted hairpin precursor sequences in the human genome; mir-181b-1 (MIR:MI0000270) is found on chromosome 1 [1], and mir-181b-2 (MIR:MI0000683) on chromosome 9 [2]. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4].
Experiment
Sequence CUCACUGAACAAUGAAUGCAA
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr4:140686344|140686462 hsa-miR-181b-3p 0 1 0
chr11:6621549|6621671 hsa-miR-181b-3p 0 1 0
chr6:139486556|139486706 hsa-miR-181b-3p 0 1 0
chr12:53977086|53977308 hsa-miR-181b-3p 0 1 0
chr18:26476515|26501250 hsa-miR-181b-3p 0 1 0
chr2:237368846|237368934 hsa-miR-181b-3p 0 1 0
chr10:102160291|102160577 hsa-miR-181b-3p 0 1 0
chr1:19327901|19328096 hsa-miR-181b-3p 0 1 0
chr19:39364334|39364535 hsa-miR-181b-3p 0 1 0
chr16:31130311|31130514 hsa-miR-181b-3p 0 1 0
chr2:210440598|210440744 hsa-miR-181b-3p 0 1 0
chr14:58408801|58408924 hsa-miR-181b-3p 0 1 0
chr22:28795303|28795449 hsa-miR-181b-3p 0 1 0
chr10:20279965|20280080 hsa-miR-181b-3p 0 1 0
chr6:30184985|30185200 hsa-miR-181b-3p 0 1 0
chr16:84975591|84975910 hsa-miR-181b-3p 0 1 0
chr22:28795379|28795620 hsa-miR-181b-3p 0 1 0
chr15:24962160|24968029 hsa-miR-181b-3p 0 1 0
chr14:106276694|106276784 hsa-miR-181b-3p 0 1 0
chr22:36288370|36288765 hsa-miR-181b-3p 0 1 0
chr19:39200988|39201132 hsa-miR-181b-3p 0 1 0
chr5:133196805|133196923 hsa-miR-181b-3p 0 1 0
chr1:94174177|94174284 hsa-miR-181b-3p 0 1 0
chr8:144512182|144512308 hsa-miR-181b-3p 0 1 0
chr15:90079773|90079876 hsa-miR-181b-3p 0 1 0
chr22:28795200|28795449 hsa-miR-181b-3p 0 1 0
chr17:41755036|41755174 hsa-miR-181b-3p 0 1 0
chr22:28795379|28795449 hsa-miR-181b-3p 0 1 0
chr18:24239220|24239377 hsa-miR-181b-3p 0 1 0
chr21:45294675|45294865 hsa-miR-181b-3p 0 1 0
chr18:24239281|24239382 hsa-miR-181b-3p 0 1 0
chr16:4860854|4861043 hsa-miR-181b-3p 0 1 0
chr20:3754551|3754724 hsa-miR-181b-3p 0 1 0
chr22:49903037|49903140 hsa-miR-181b-3p 0 1 0
chr10:27528538|27528717 hsa-miR-181b-3p 0 1 0
chr11:314060|314191 hsa-miR-181b-3p 0 1 0
chr19:56494686|56495038 hsa-miR-181b-3p 0 1 0
chr1:43419921~43420244 hsa-miR-181b-3p 0 1 0
chr8:144356009~144356135 hsa-miR-181b-3p 0 1 0
chr11:117999820~118000015 hsa-miR-181b-3p 0 1 0
chr4:82484909~82485018 hsa-miR-181b-3p 0 1 0
chr1:155053908~155054214 hsa-miR-181b-3p 0 1 0
chr11:117999737~117999843 hsa-miR-181b-3p 0 1 0
chr10:102160291~102160577 hsa-miR-181b-3p 0 1 0
chr13:31150947~31151178 hsa-miR-181b-3p 0 1 0
chr22:42890947~42891102 hsa-miR-181b-3p 0 1 0
chr12:112403808~112403879 hsa-miR-181b-3p 0 1 0
chrX:48823690~48824068 hsa-miR-181b-3p 0 1 0
chr17:41755036~41755174 hsa-miR-181b-3p 0 1 0
chr3:14142643~14142776 hsa-miR-181b-3p 0 1 0
chr22:28795379~28795630 hsa-miR-181b-3p 0 1 0
chr16:57135080|57135205 hsa-miR-181b-3p 0 1 0
chr1:234608002|234608180 hsa-miR-181b-3p 0 1 0
chrX:77893492|77893635 hsa-miR-181b-3p 0 1 0
chr1:234607969|234608173 hsa-miR-181b-3p 0 1 0
chr2:27382135|27382531 hsa-miR-181b-3p 0 1 0
chr1:234607941|234608173 hsa-miR-181b-3p 0 1 0
chr2:151999349|151999483 hsa-miR-181b-3p 0 1 0
chr17:78400735|78401057 hsa-miR-181b-3p 0 1 0
chr16:46963068|46963159 hsa-miR-181b-3p 0 1 0
chr7:36934648|36934847 hsa-miR-181b-3p 0 1 0
chr13:28001592|28001706 hsa-miR-181b-3p 0 1 0
chr19:7640778|7640976 hsa-miR-181b-3p 0 1 0
chr16:24750726|24758360 hsa-miR-181b-3p 0 1 0
chr16:87831387|87831587 hsa-miR-181b-3p 0 1 0
chr14:36513183|36513335 hsa-miR-181b-3p 0 1 0
chr5:172211878|172211966 hsa-miR-181b-3p 0 1 0
chr5:172690729|172690828 hsa-miR-181b-3p 0 1 0
chr5:134578592|134578859 hsa-miR-181b-3p 0 1 0
chr2:210440598|210440703 hsa-miR-181b-3p 0 1 0
chr11:314060|314232 hsa-miR-181b-3p 0 1 0
chr3:78596088|78596224 hsa-miR-181b-3p 0 1 0
chr15:72199371|72199525 hsa-miR-181b-3p 0 1 0
chr14:36483433|36483608 hsa-miR-181b-3p 0 1 0
chr9:123757703|123769563 hsa-miR-181b-3p 0 1 0
chr3:45966961|45967113 hsa-miR-181b-3p 0 1 0
chrX:71096349|71096514 hsa-miR-181b-3p 0 1 0
chr17:4718270|4718662 hsa-miR-181b-3p 0 1 0
chr2:237368846|237368942 hsa-miR-181b-3p 0 1 0
chr19:3155854|3155952 hsa-miR-181b-3p 0 1 0
chr22:20441731|20441863 hsa-miR-181b-3p 0 1 0
chr11:106010492|106010705 hsa-miR-181b-3p 0 1 0
chrX:48823702|48824024 hsa-miR-181b-3p 0 1 0
chr3:122565859|122566070 hsa-miR-181b-3p 0 1 0
chr2:157780393|157780519 hsa-miR-181b-3p 0 1 0
chr3:184324996|184325373 hsa-miR-181b-3p 0 1 0
chr2:190997902|190998300 hsa-miR-181b-3p 0 1 0
chr11:67626897|67627080 hsa-miR-181b-3p 0 1 0
chr19:44909197|44909288 hsa-miR-181b-3p 0 1 0
chr8:58451793|58451982 hsa-miR-181b-3p 0 1 0
chr15:40089528|40089686 hsa-miR-181b-3p 0 1 0
chrX:153767080|153767214 hsa-miR-181b-3p 0 1 0
chr2:181921948|181922121 hsa-miR-181b-3p 0 1 0
chr14:22924019|22924141 hsa-miR-181b-3p 0 1 0
chr7:2527580|2527715 hsa-miR-181b-3p 0 1 0
chr22:28795202|28795449 hsa-miR-181b-3p 0 1 0
chr6:134169976|134170184 hsa-miR-181b-3p 0 1 0
chr17:41755036|41755209 hsa-miR-181b-3p 0 1 0
chrX:153767018|153767214 hsa-miR-181b-3p 0 1 0
chr7:44828302|44828413 hsa-miR-181b-3p 0 1 0
chr2:237368846|237369083 hsa-miR-181b-3p 0 1 0
chr6:33962507|33962643 hsa-miR-181b-3p 0 1 0
chr14:54424790|54424934 hsa-miR-181b-3p 0 1 0
chr11:117999699|117999843 hsa-miR-181b-3p 0 1 0
chr11:117999655|117999843 hsa-miR-181b-3p 0 1 0
chr11:117999719|117999843 hsa-miR-181b-3p 0 1 0
chr9:121179923|121180046 hsa-miR-181b-3p 0 1 0
chr19:7640766|7640976 hsa-miR-181b-3p -3 1 0
chr5:141477701|141477892 hsa-miR-181b-3p -3 1 0
chr20:36230338|36230493 hsa-miR-181b-3p 0 1 0
chr7:90414271|90414432 hsa-miR-181b-3p 0 1 0
chr2:237368846|237369041 hsa-miR-181b-3p 0 1 0
chr3:45966982|45967209 hsa-miR-181b-3p 0 1 0
chr1:207884017|207884155 hsa-miR-181b-3p 0 1 0
chr11:72232938|72233138 hsa-miR-181b-3p 0 1 0
chr9:35697831|35698094 hsa-miR-181b-3p 0 1 0
chr14:22924044|22924125 hsa-miR-181b-3p 0 1 0
chr17:41754953|41755309 hsa-miR-181b-3p 0 1 0
chr7:29916768|29916961 hsa-miR-181b-3p 0 1 0
chr11:34100646|34100764 hsa-miR-181b-3p 0 1 0
chr2:47799292|47799413 hsa-miR-181b-3p 0 1 0
chr2:237368846|237369039 hsa-miR-181b-3p 0 1 0
chr1:228092891|228093241 hsa-miR-181b-3p 0 1 0
chr11:59207561|59207692 hsa-miR-181b-3p 0 1 0
chr19:50820290|50820584 hsa-miR-181b-3p 0 1 0
chr1:44651314|44651492 hsa-miR-181b-3p 0 1 0
chr4:82484867|82485040 hsa-miR-181b-3p 0 1 0
chr12:120579322|120579547 hsa-miR-181b-3p 0 1 0
chr6:2115771|2117556 hsa-miR-181b-3p 0 1 0
chr1:159713493|159713734 hsa-miR-181b-3p 0 1 0
chr1:155053934|155054190 hsa-miR-181b-3p 0 1 0
chr12:29333909|29333991 hsa-miR-181b-3p 0 1 0
chr18:57001376|57001503 hsa-miR-181b-3p 0 1 0
chr1:36300600|36300772 hsa-miR-181b-3p 0 1 0
chr15:65593460|65593561 hsa-miR-181b-3p 0 1 0
chr12:53214176|53214552 hsa-miR-181b-3p 0 1 0
chr10:102160299|102160544 hsa-miR-181b-3p 0 1 0
chr5:172690702|172690875 hsa-miR-181b-3p 0 1 0
chr17:4545301|4545678 hsa-miR-181b-3p 0 1 0
chr1:44651302|44651492 hsa-miR-181b-3p 0 1 0
chr11:117999726|117999843 hsa-miR-181b-3p 0 1 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-181b-3p SOWAHB sosondowah ankyrin repeat domain family member B HGNC:32958 details
hsa-miR-181b-3p OSMR oncostatin M receptor HGNC:8507 details
hsa-miR-181b-3p ASB4 ankyrin repeat and SOCS box containing 4 HGNC:16009 details
hsa-miR-181b-3p TSR1 TSR1 ribosome maturation factor HGNC:25542 details
hsa-miR-181b-3p SPPL3 signal peptide peptidase like 3 HGNC:30424 details
hsa-miR-181b-3p CSNK1G1 casein kinase 1 gamma 1 HGNC:2454 details
hsa-miR-181b-3p ZNF644 zinc finger protein 644 HGNC:29222 details
hsa-miR-181b-3p QKI QKI, KH domain containing RNA binding HGNC:21100 details
hsa-miR-181b-3p MAPK1 mitogen-activated protein kinase 1 HGNC:6871 details
hsa-miR-181b-3p ARL5B ADP ribosylation factor like GTPase 5B HGNC:23052 details
hsa-miR-181b-3p PPP1R14C protein phosphatase 1 regulatory inhibitor subunit 14C HGNC:14952 details
hsa-miR-181b-3p SCUBE1 signal peptide, CUB domain and EGF like domain containing 1 HGNC:13441 details
hsa-miR-181b-3p NRL neural retina leucine zipper HGNC:8002 details
hsa-miR-181b-3p IYD iodotyrosine deiodinase HGNC:21071 details
hsa-miR-181b-3p OTUB2 OTU deubiquitinase, ubiquitin aldehyde binding 2 HGNC:20351 details
hsa-miR-181b-3p MKNK2 MAPK interacting serine/threonine kinase 2 HGNC:7111 details
hsa-miR-181b-3p FBXO47 F-box protein 47 HGNC:31969 details
hsa-miR-181b-3p ADARB2 adenosine deaminase RNA specific B2 (inactive) HGNC:227 details
hsa-miR-181b-3p GFPT1 glutamine--fructose-6-phosphate transaminase 1 HGNC:4241 details
hsa-miR-181b-3p SRSF11 serine and arginine rich splicing factor 11 HGNC:10782 details
hsa-miR-181b-3p ZNF543 zinc finger protein 543 HGNC:25281 details
hsa-miR-181b-3p SKI SKI proto-oncogene HGNC:10896 details
hsa-miR-181b-3p RAP2C RAP2C, member of RAS oncogene family HGNC:21165 details
hsa-miR-181b-3p CLTA clathrin light chain A HGNC:2090 details
hsa-miR-181b-3p RPL7L1 ribosomal protein L7 like 1 HGNC:21370 details
hsa-miR-181b-3p LONRF2 LON peptidase N-terminal domain and ring finger 2 HGNC:24788 details
hsa-miR-181b-3p SLC35G3 solute carrier family 35 member G3 HGNC:26848 details
hsa-miR-181b-3p FAM124A family with sequence similarity 124 member A HGNC:26413 details
hsa-miR-181b-3p STYK1 serine/threonine/tyrosine kinase 1 HGNC:18889 details
hsa-miR-181b-3p ABCG8 ATP binding cassette subfamily G member 8 HGNC:13887 details
hsa-miR-181b-3p ZIC4 Zic family member 4 HGNC:20393 details
hsa-miR-181b-3p FBXL20 F-box and leucine rich repeat protein 20 HGNC:24679 details
hsa-miR-181b-3p GABRB1 gamma-aminobutyric acid type A receptor subunit beta1 HGNC:4081 details
hsa-miR-181b-3p CILP2 cartilage intermediate layer protein 2 HGNC:24213 details
hsa-miR-181b-3p DNAH8 dynein axonemal heavy chain 8 HGNC:2952 details
hsa-miR-181b-3p ZNF398 zinc finger protein 398 HGNC:18373 details
hsa-miR-181b-3p PLCG2 phospholipase C gamma 2 HGNC:9066 details
hsa-miR-181b-3p GLUL glutamate-ammonia ligase HGNC:4341 details
hsa-miR-181b-3p RHOBTB3 Rho related BTB domain containing 3 HGNC:18757 details
hsa-miR-181b-3p CNDP1 carnosine dipeptidase 1 HGNC:20675 details
hsa-miR-181b-3p C1orf158 chromosome 1 open reading frame 158 HGNC:28567 details
hsa-miR-181b-3p SLCO3A1 solute carrier organic anion transporter family member 3A1 HGNC:10952 details
hsa-miR-181b-3p RIMKLB ribosomal modification protein rimK like family member B HGNC:29228 details
hsa-miR-181b-3p MRPS25 mitochondrial ribosomal protein S25 HGNC:14511 details
hsa-miR-181b-3p details
hsa-miR-181b-3p EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 HGNC:16787 details
hsa-miR-181b-3p CLIC4 chloride intracellular channel 4 HGNC:13518 details
hsa-miR-181b-3p CD164 CD164 molecule HGNC:1632 details
hsa-miR-181b-3p details
hsa-miR-181b-3p PDIK1L PDLIM1 interacting kinase 1 like HGNC:18981 details
hsa-miR-181b-3p ZNF460 zinc finger protein 460 HGNC:21628 details
hsa-miR-181b-3p SLC2A11 solute carrier family 2 member 11 HGNC:14239 details
hsa-miR-181b-3p FSTL1 follistatin like 1 HGNC:3972 details
hsa-miR-181b-3p GPR132 G protein-coupled receptor 132 HGNC:17482 details
hsa-miR-181b-3p SLC5A12 solute carrier family 5 member 12 HGNC:28750 details
hsa-miR-181b-3p SH2D1A SH2 domain containing 1A HGNC:10820 details
hsa-miR-181b-3p SPOUT1 SPOUT domain containing methyltransferase 1 HGNC:26933 details
hsa-miR-181b-3p PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 HGNC:30483 details
hsa-miR-181b-3p YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma HGNC:12852 details
hsa-miR-181b-3p NFASC neurofascin HGNC:29866 details
hsa-miR-181b-3p GTF2F1 general transcription factor IIF subunit 1 HGNC:4652 details
hsa-miR-181b-3p RBM20 RNA binding motif protein 20 HGNC:27424 details
hsa-miR-181b-3p SLC37A2 solute carrier family 37 member 2 HGNC:20644 details
hsa-miR-181b-3p AGO2 argonaute RISC catalytic component 2 HGNC:3263 details
hsa-miR-181b-3p APOBEC4 apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 HGNC:32152 details
hsa-miR-181b-3p PHB2 prohibitin 2 HGNC:30306 details
hsa-miR-181b-3p NSL1 NSL1 component of MIS12 kinetochore complex HGNC:24548 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab