miRNA Card

miRNA General Information
miRNA ID hsa-miR-3117-3p
Description Homo sapiens miR-3117 stem-loop
Comment None
Experiment Illumina [1-3]
Sequence AUAGGACUCAUAUAGUGCCAG
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr1:35415632|35418486 hsa-miR-3117-3p 1 0 0
chr21:25891722|25891868 hsa-miR-3117-3p 1 0 0
chr12:54286165|54286286 hsa-miR-3117-3p 0 1 0
chr11:94619814|94620050 hsa-miR-3117-3p 0 1 0
chr12:55993165|55993345 hsa-miR-3117-3p 0 1 0
chr20:32237732|32237877 hsa-miR-3117-3p 0 1 0
chr22:36288832|36289130 hsa-miR-3117-3p 0 1 0
chr8:85216261|85216452 hsa-miR-3117-3p 0 1 0
chr19:58549985|58550210 hsa-miR-3117-3p 0 1 0
chr11:65423945|65424062 hsa-miR-3117-3p 0 1 0
chr13:110203589|110205538 hsa-miR-3117-3p 0 1 0
chr15:41837299|41837434 hsa-miR-3117-3p 1 0 0
chr15:67542961|67543061 hsa-miR-3117-3p 1 0 0
chr8:18528247|18528386 hsa-miR-3117-3p 1 0 0
chr2:219369704|219369786 hsa-miR-3117-3p 1 0 0
chr1:160214912|160215132 hsa-miR-3117-3p 0 1 0
chr5:147392645|147392826 hsa-miR-3117-3p 0 1 0
chr9:133363161|133363369 hsa-miR-3117-3p 0 1 0
chr17:43016106|43016402 hsa-miR-3117-3p 0 1 0
chr7:105040839|105041023 hsa-miR-3117-3p 0 1 0
chr14:21076409|21076643 hsa-miR-3117-3p 0 1 0
chr11:108473427|108473580 hsa-miR-3117-3p 0 1 0
chr5:5464272|5464420 hsa-miR-3117-3p 0 1 0
chr15:42723646|42723781 hsa-miR-3117-3p 0 1 0
chr3:128070528|128070723 hsa-miR-3117-3p 0 1 0
chr7:3041142|3041355 hsa-miR-3117-3p 0 1 0
chr19:37485202|37485291 hsa-miR-3117-3p 0 1 0
chr5:177371358|177371543 hsa-miR-3117-3p 0 1 0
chr11:65423891|65424062 hsa-miR-3117-3p 0 1 0
chr12:120689343|120689438 hsa-miR-3117-3p 0 1 0
chr5:147392702~147392808 hsa-miR-3117-3p 0 1 0
chr1:225841104~225841215 hsa-miR-3117-3p 0 1 0
chr5:147392645~147392826 hsa-miR-3117-3p 0 1 0
chr9:133363161~133363369 hsa-miR-3117-3p 0 1 0
chr1:66373438~66373560 hsa-miR-3117-3p 0 1 0
chr13:110205353~110205538 hsa-miR-3117-3p 0 1 0
chr5:81229584~81229793 hsa-miR-3117-3p 0 1 0
chr11:65423945~65424062 hsa-miR-3117-3p 0 1 0
chr2:186678804~186679013 hsa-miR-3117-3p 0 1 0
chr7:116507302~116507426 hsa-miR-3117-3p 0 1 0
chr4:6696959~6697079 hsa-miR-3117-3p 0 1 0
chr4:76003159~76003373 hsa-miR-3117-3p 0 1 0
chr17:43016106~43016402 hsa-miR-3117-3p 0 1 0
chr20:32237732~32237877 hsa-miR-3117-3p 0 1 0
chr3:128070504~128070670 hsa-miR-3117-3p 0 1 0
chr10:1180461|1180614 hsa-miR-3117-3p 1 0 0
chr9:113462337|113462443 hsa-miR-3117-3p 0 1 0
chr7:2369544|2369682 hsa-miR-3117-3p 0 1 0
chr1:145935361|145935453 hsa-miR-3117-3p 0 1 0
chr5:40692147|40692283 hsa-miR-3117-3p 0 1 0
chr3:121632375|121632563 hsa-miR-3117-3p 0 1 0
chr3:38532125|38532242 hsa-miR-3117-3p 0 1 0
chr21:15043495|15043574 hsa-miR-3117-3p 1 0 0
chr6:111112158|111112297 hsa-miR-3117-3p 0 1 0
chr5:177503462|177503637 hsa-miR-3117-3p 0 1 0
chr1:3498955|3499138 hsa-miR-3117-3p 0 1 0
chr1:12180556|12180730 hsa-miR-3117-3p 0 1 0
chr4:81147427|81147578 hsa-miR-3117-3p 0 1 0
chr20:2756505|2756630 hsa-miR-3117-3p 0 1 0
chr22:29203247|29203417 hsa-miR-3117-3p 0 1 0
chr3:45661034|45661158 hsa-miR-3117-3p 0 1 0
chr3:12591442|12591622 hsa-miR-3117-3p 0 1 0
chr19:39356079|39356373 hsa-miR-3117-3p 0 1 0
chr1:39396959|39397069 hsa-miR-3117-3p 1 0 0
chr5:72190751|72190850 hsa-miR-3117-3p 1 0 0
chr21:15014344|15043574 hsa-miR-3117-3p 1 0 0
chr10:99404457|99404595 hsa-miR-3117-3p 1 0 0
chr10:6221429|6221660 hsa-miR-3117-3p 1 0 0
chr9:133363161|133363339 hsa-miR-3117-3p 0 1 0
chr3:52487245|52487389 hsa-miR-3117-3p 0 1 0
chr9:7799589|7799762 hsa-miR-3117-3p 0 1 0
chr7:105107362|105107658 hsa-miR-3117-3p 0 1 0
chr17:4937822|4938064 hsa-miR-3117-3p 0 1 0
chr11:1261643|1261883 hsa-miR-3117-3p 0 1 0
chr3:128070583|128070741 hsa-miR-3117-3p 0 1 0
chr3:128070592|128070747 hsa-miR-3117-3p 0 1 0
chr9:7799598|7799781 hsa-miR-3117-3p 0 1 0
chr12:54286137|54286282 hsa-miR-3117-3p 0 1 0
chr16:766442|766757 hsa-miR-3117-3p 0 1 0
chr12:116662044|116662164 hsa-miR-3117-3p 0 1 0
chr7:105038126|105041023 hsa-miR-3117-3p 0 1 0
chr7:100355143|100355804 hsa-miR-3117-3p 0 1 0
chr5:38886394|38886514 hsa-miR-3117-3p 0 1 0
chr9:133363161|133363287 hsa-miR-3117-3p 0 1 0
chr9:72354886|72355033 hsa-miR-3117-3p 0 1 0
chr10:72954527|72954696 hsa-miR-3117-3p 0 1 0
chr20:5497718|5497932 hsa-miR-3117-3p 0 1 0
chr19:42295193|42295276 hsa-miR-3117-3p 0 1 0
chr17:4955204|4955584 hsa-miR-3117-3p 0 1 0
chr7:105107509|105107658 hsa-miR-3117-3p 0 1 0
chr2:27335598|27335945 hsa-miR-3117-3p 0 1 0
chr19:11980055|11980209 hsa-miR-3117-3p 0 1 0
chr1:150811126|150811387 hsa-miR-3117-3p 0 1 0
chr1:103561809|103561946 hsa-miR-3117-3p 0 1 0
chr7:44067024|44067272 hsa-miR-3117-3p 0 1 0
chr19:44175002|44175161 hsa-miR-3117-3p 0 1 0
chr3:128070504|128070723 hsa-miR-3117-3p 0 1 0
chr6:30988033|30988190 hsa-miR-3117-3p 0 1 0
chrX:136914660|136914886 hsa-miR-3117-3p 0 1 0
chr4:6696908|6697079 hsa-miR-3117-3p 0 1 0
chr19:12878561|12878783 hsa-miR-3117-3p 0 1 0
chr19:42295188|42295276 hsa-miR-3117-3p 0 1 0
chr19:37362573|37362740 hsa-miR-3117-3p 0 1 0
chr8:94664744|94665059 hsa-miR-3117-3p -14 1 0
chr16:766353|766724 hsa-miR-3117-3p -15 1 0
chr5:177485644|177485872 hsa-miR-3117-3p -8 1 0
chr7:99494246|99494427 hsa-miR-3117-3p 1 0 0
chr3:185519149|185519286 hsa-miR-3117-3p 1 0 0
chr17:41754953|41755309 hsa-miR-3117-3p 1 0 0
chr16:67541753|67542063 hsa-miR-3117-3p 1 0 0
chr19:54460146|54460277 hsa-miR-3117-3p 0 1 0
chr3:47849028|47849313 hsa-miR-3117-3p 0 1 0
chr4:6696893|6697079 hsa-miR-3117-3p 0 1 0
chr20:32237743|32237877 hsa-miR-3117-3p 0 1 0
chr20:36527734|36527894 hsa-miR-3117-3p 0 1 0
chr20:32237729|32237877 hsa-miR-3117-3p 0 1 0
chr2:54631228|54631428 hsa-miR-3117-3p 0 1 0
chr4:6696959|6697079 hsa-miR-3117-3p 0 1 0
chr13:43061895|43062008 hsa-miR-3117-3p 0 1 0
chr4:6696903|6697079 hsa-miR-3117-3p 0 1 0
chr16:11549610|11549745 hsa-miR-3117-3p 0 1 0
chr7:105107530|105107658 hsa-miR-3117-3p 0 1 0
chr8:22421826|22421977 hsa-miR-3117-3p 0 1 0
chr2:47799626|47799841 hsa-miR-3117-3p 0 1 0
chr3:53817602|53817726 hsa-miR-3117-3p 0 1 0
chr20:36527739|36527920 hsa-miR-3117-3p 0 1 0
chr14:58413822|58413905 hsa-miR-3117-3p 0 1 0
chr6:3271014|3271147 hsa-miR-3117-3p 0 1 0
chr7:139405756|139407350 hsa-miR-3117-3p 0 1 0
chr4:56911336|56911536 hsa-miR-3117-3p 0 1 0
chr15:43771201|43771352 hsa-miR-3117-3p 0 1 0
chr11:1261643|1261847 hsa-miR-3117-3p 0 1 0
chr15:41837291|41837434 hsa-miR-3117-3p 1 0 0
chr10:6221420|6221686 hsa-miR-3117-3p 1 0 0
chrX:101626663|101626771 hsa-miR-3117-3p 1 0 0
chr12:46184997|46185128 hsa-miR-3117-3p 1 0 0
chr22:31284276|31284520 hsa-miR-3117-3p 1 0 0
chr15:93026946|93027112 hsa-miR-3117-3p 1 0 0
chr8:94664736|94664958 hsa-miR-3117-3p 1 0 0
chr4:17486869|17487042 hsa-miR-3117-3p 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-3117-3p ZFYVE19 zinc finger FYVE-type containing 19 HGNC:20758 details
hsa-miR-3117-3p ZNF514 zinc finger protein 514 HGNC:25894 details
hsa-miR-3117-3p RPL22 ribosomal protein L22 HGNC:10315 details
hsa-miR-3117-3p ZNF740 zinc finger protein 740 HGNC:27465 details
hsa-miR-3117-3p AHR aryl hydrocarbon receptor HGNC:348 details
hsa-miR-3117-3p DR1 down-regulator of transcription 1 HGNC:3017 details
hsa-miR-3117-3p ABCD2 ATP binding cassette subfamily D member 2 HGNC:66 details
hsa-miR-3117-3p UBTF upstream binding transcription factor HGNC:12511 details
hsa-miR-3117-3p FEM1C fem-1 homolog C HGNC:16933 details
hsa-miR-3117-3p BTG2 BTG anti-proliferation factor 2 HGNC:1131 details
hsa-miR-3117-3p VSIG2 V-set and immunoglobulin domain containing 2 HGNC:17149 details
hsa-miR-3117-3p NONO non-POU domain containing octamer binding HGNC:7871 details
hsa-miR-3117-3p TRIM71 tripartite motif containing 71 HGNC:32669 details
hsa-miR-3117-3p MTFR1L mitochondrial fission regulator 1 like HGNC:28836 details
hsa-miR-3117-3p RAB5B RAB5B, member RAS oncogene family HGNC:9784 details
hsa-miR-3117-3p C2orf69 chromosome 2 open reading frame 69 HGNC:26799 details
hsa-miR-3117-3p TMEM19 transmembrane protein 19 HGNC:25605 details
hsa-miR-3117-3p TRIM2 tripartite motif containing 2 HGNC:15974 details
hsa-miR-3117-3p TCF7L2 transcription factor 7 like 2 HGNC:11641 details
hsa-miR-3117-3p LONRF1 LON peptidase N-terminal domain and ring finger 1 HGNC:26302 details
hsa-miR-3117-3p SLC7A2 solute carrier family 7 member 2 HGNC:11060 details
hsa-miR-3117-3p MTRNR2L1 MT-RNR2 like 1 HGNC:37155 details
hsa-miR-3117-3p MTRNR2L11 MT-RNR2 like 11 HGNC:37168 details
hsa-miR-3117-3p ZNF460 zinc finger protein 460 HGNC:21628 details
hsa-miR-3117-3p CAPRIN1 cell cycle associated protein 1 HGNC:6743 details
hsa-miR-3117-3p AZI2 5-azacytidine induced 2 HGNC:24002 details
hsa-miR-3117-3p XRCC2 X-ray repair cross complementing 2 HGNC:12829 details
hsa-miR-3117-3p SPOP speckle type BTB/POZ protein HGNC:11254 details
hsa-miR-3117-3p PPP2R3A protein phosphatase 2 regulatory subunit B''alpha HGNC:9307 details
hsa-miR-3117-3p SYNGR1 synaptogyrin 1 HGNC:11498 details
hsa-miR-3117-3p SMAD1 SMAD family member 1 HGNC:6767 details
hsa-miR-3117-3p MYLK4 myosin light chain kinase family member 4 HGNC:27972 details
hsa-miR-3117-3p ATP9A ATPase phospholipid transporting 9A (putative) HGNC:13540 details
hsa-miR-3117-3p details
hsa-miR-3117-3p CREM cAMP responsive element modulator HGNC:2352 details
hsa-miR-3117-3p ZBTB46 zinc finger and BTB domain containing 46 HGNC:16094 details
hsa-miR-3117-3p UGT8 UDP glycosyltransferase 8 HGNC:12555 details
hsa-miR-3117-3p LASP1 LIM and SH3 protein 1 HGNC:6513 details
hsa-miR-3117-3p SNAPC1 small nuclear RNA activating complex polypeptide 1 HGNC:11134 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab