miRNA Card

miRNA General Information
miRNA ID hsa-miR-3146
Description Homo sapiens miR-3146 stem-loop
Comment None
Experiment Illumina [1-2]
Sequence CAUGCUAGGAUAGAAAGAAUGG
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr11:93181691|93185814 hsa-miR-3146 1 1 1

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr1:165683082|165695329 hsa-miR-3146 1 0 0
chr8:56978050|56978145 hsa-miR-3146 0 1 0
chr18:36126455|36126544 hsa-miR-3146 0 1 0
chr14:68789694|68789841 hsa-miR-3146 0 1 0
chr5:135572139|135572252 hsa-miR-3146 0 1 0
chr15:75020992|75021111 hsa-miR-3146 0 1 0
chr11:72098808|72099192 hsa-miR-3146 0 1 0
chr15:63323663|63323810 hsa-miR-3146 0 1 0
chr3:133826231|133826393 hsa-miR-3146 0 1 0
chrX:41343737|41344074 hsa-miR-3146 0 1 0
chr4:51914580|51914732 hsa-miR-3146 0 1 0
chr14:68789572|68789828 hsa-miR-3146 0 1 0
chr11:65423945|65424062 hsa-miR-3146 0 1 0
chr16:2598086|2598153 hsa-miR-3146 0 1 0
chr8:29070225|29070396 hsa-miR-3146 0 1 0
chr4:86812357|86812541 hsa-miR-3146 0 1 0
chr17:63820255|63820422 hsa-miR-3146 1 0 0
chr17:63820120|63820341 hsa-miR-3146 1 0 0
chr5:133105941|133106327 hsa-miR-3146 1 0 0
chr12:6375106|6375289 hsa-miR-3146 1 0 0
chr6:75089148|75090195 hsa-miR-3146 1 0 0
chr12:6375106|6375262 hsa-miR-3146 1 0 0
chr11:106097818|106097874 hsa-miR-3146 1 0 0
chr12:51383461|51383535 hsa-miR-3146 1 0 0
chr5:35727702|35727823 hsa-miR-3146 1 0 0
chr14:68789723|68789828 hsa-miR-3146 0 1 0
chr12:6333820|6334214 hsa-miR-3146 0 1 0
chr7:137876594|137876696 hsa-miR-3146 0 1 0
chr1:45514949|45515767 hsa-miR-3146 0 1 0
chr1:149944237|149944441 hsa-miR-3146 0 1 0
chr4:56990778|56990898 hsa-miR-3146 0 1 0
chr9:134771472|134771672 hsa-miR-3146 0 1 0
chr2:231795208|231795481 hsa-miR-3146 0 1 0
chr1:222652002|222652332 hsa-miR-3146 0 1 0
chr3:141946527|141946681 hsa-miR-3146 0 1 0
chr16:20924322|20924494 hsa-miR-3146 0 1 0
chr16:74447811|74447936 hsa-miR-3146 0 1 0
chr14:96565063|96565260 hsa-miR-3146 0 1 0
chr19:11837660|11837777 hsa-miR-3146 0 1 0
chr7:94668644|94668838 hsa-miR-3146 0 1 0
chr2:202206825|202206930 hsa-miR-3146 0 1 0
chr11:65423891|65424062 hsa-miR-3146 0 1 0
chr16:2766596~2766904 hsa-miR-3146 0 1 0
chr8:56978050~56978145 hsa-miR-3146 0 1 0
chr8:22620143~22620297 hsa-miR-3146 0 1 0
chr14:68789723~68789828 hsa-miR-3146 0 1 0
chr18:36126455~36126544 hsa-miR-3146 0 1 0
chr2:207080336~207080511 hsa-miR-3146 0 1 0
chr10:101039787~101040069 hsa-miR-3146 0 1 0
chr8:78724128~78729622 hsa-miR-3146 0 1 0
chr4:51914552~51914732 hsa-miR-3146 0 1 0
chr11:72098781~72099173 hsa-miR-3146 0 1 0
chr18:36126436~36126525 hsa-miR-3146 0 1 0
chr5:141939881~141940070 hsa-miR-3146 0 1 0
chr3:190629409~190629498 hsa-miR-3146 0 1 0
chr11:65423945~65424062 hsa-miR-3146 0 1 0
chr19:35005813|35005931 hsa-miR-3146 1 0 0
chr2:45687669|45687820 hsa-miR-3146 1 0 0
chr17:63820096|63820287 hsa-miR-3146 1 0 0
chr17:80269283|80269528 hsa-miR-3146 1 0 0
chr11:121632100|121632290 hsa-miR-3146 0 1 0
chr7:26198733|26198903 hsa-miR-3146 0 1 0
chr4:1723566|1723852 hsa-miR-3146 0 1 0
chr2:24729582|24729765 hsa-miR-3146 0 1 0
chr19:54588152|54588304 hsa-miR-3146 0 1 0
chr17:67597753|67597851 hsa-miR-3146 0 1 0
chr20:3902466|3902580 hsa-miR-3146 0 1 0
chr1:103575237|103575484 hsa-miR-3146 0 1 0
chr1:153952189|153952424 hsa-miR-3146 1 0 0
chr7:50392921|50393084 hsa-miR-3146 1 0 0
chr14:74013959|74014050 hsa-miR-3146 0 1 0
chr10:75472991|75473126 hsa-miR-3146 0 1 0
chr2:3297098|3297245 hsa-miR-3146 0 1 0
chr3:14487591|14487736 hsa-miR-3146 0 1 0
chr6:154737453|154737603 hsa-miR-3146 0 1 0
chr1:205148535|205148638 hsa-miR-3146 0 1 0
chr9:74522899|74523071 hsa-miR-3146 0 1 0
chr1:32659551|32659721 hsa-miR-3146 0 1 0
chr4:16245685|16245904 hsa-miR-3146 0 1 0
chr1:243245984|243246100 hsa-miR-3146 0 1 0
chr7:26198733|26198880 hsa-miR-3146 0 1 0
chr6:108598895|108598971 hsa-miR-3146 0 1 0
chr11:3119761|3120046 hsa-miR-3146 0 1 0
chr1:165683082|165695367 hsa-miR-3146 1 0 0
chr19:40947502|40947646 hsa-miR-3146 1 0 0
chr22:36266944|36267225 hsa-miR-3146 1 0 0
chr15:76338677|76338911 hsa-miR-3146 1 0 0
chr12:6375106|6375249 hsa-miR-3146 1 0 0
chr2:43304508|43304629 hsa-miR-3146 1 0 0
chr8:61623898|61624049 hsa-miR-3146 1 0 0
chr22:36266944|36267073 hsa-miR-3146 1 0 0
chr17:63820255|63820341 hsa-miR-3146 1 0 0
chr11:67049808|67049983 hsa-miR-3146 0 1 0
chr16:67230066|67230222 hsa-miR-3146 0 1 0
chr19:7114506|7114669 hsa-miR-3146 0 1 0
chr14:68789723|68789967 hsa-miR-3146 0 1 0
chr4:40348790|40349046 hsa-miR-3146 0 1 0
chr1:39388366|39388527 hsa-miR-3146 0 1 0
chr19:17219244|17219387 hsa-miR-3146 0 1 0
chr1:240144349|240144519 hsa-miR-3146 0 1 0
chr16:2766711|2766952 hsa-miR-3146 0 1 0
chr11:67049813|67049908 hsa-miR-3146 0 1 0
chr12:6333820|6334175 hsa-miR-3146 0 1 0
chr7:137876594|137876710 hsa-miR-3146 0 1 0
chrX:56569053|56569170 hsa-miR-3146 0 1 0
chr12:7137811|7138067 hsa-miR-3146 0 1 0
chr9:37909611|37909723 hsa-miR-3146 0 1 0
chr2:207080336|207080518 hsa-miR-3146 0 1 0
chr12:6333820|6334130 hsa-miR-3146 0 1 0
chr11:67049841|67049977 hsa-miR-3146 0 1 0
chr1:248849088|248849247 hsa-miR-3146 0 1 0
chr1:20918564|20918693 hsa-miR-3146 0 1 0
chr21:36005695|36005798 hsa-miR-3146 0 1 0
chr12:107659060|107659167 hsa-miR-3146 0 1 0
chr20:2964272|2965202 hsa-miR-3146 0 1 0
chr15:70682758|70684446 hsa-miR-3146 0 1 0
chr8:29070225|29070425 hsa-miR-3146 0 1 0
chr2:85537699|85537920 hsa-miR-3146 0 1 0
chr13:109755812|109756132 hsa-miR-3146 0 1 0
chr9:128730017|128730198 hsa-miR-3146 0 1 0
chr11:72098797|72099192 hsa-miR-3146 0 1 0
chr12:6968508|6968593 hsa-miR-3146 0 1 0
chr10:74083380|74083513 hsa-miR-3146 0 1 0
chr17:45160722|45160891 hsa-miR-3146 0 1 0
chr5:131429649|131429834 hsa-miR-3146 0 1 0
chr3:183811256|183811466 hsa-miR-3146 0 1 0
chr7:47514374|47514548 hsa-miR-3146 0 1 0
chr7:137876594|137876700 hsa-miR-3146 0 1 0
chr20:62944997|62945229 hsa-miR-3146 -8 1 0
chr3:124905978|124906135 hsa-miR-3146 -12 1 0
chr11:106097764|106097874 hsa-miR-3146 1 0 0
chr5:32125073|32125181 hsa-miR-3146 1 0 0
chr22:36266948|36267097 hsa-miR-3146 1 0 0
chr8:144684192|144684300 hsa-miR-3146 1 0 0
chrX:48925865|48926005 hsa-miR-3146 0 1 0
chr12:55980686|55980799 hsa-miR-3146 0 1 0
chr13:39751623|39751798 hsa-miR-3146 0 1 0
chr10:100994059|100994228 hsa-miR-3146 0 1 0
chr3:124905978|124906113 hsa-miR-3146 0 1 0
chr1:13818992|13819149 hsa-miR-3146 0 1 0
chr2:37232234|37236176 hsa-miR-3146 0 1 0
chr3:197510061|197510206 hsa-miR-3146 0 1 0
chr8:29067680|29067833 hsa-miR-3146 0 1 0
chr21:36005680|36005798 hsa-miR-3146 0 1 0
chr12:108649121|108649260 hsa-miR-3146 0 1 0
chr7:100856026|100856151 hsa-miR-3146 0 1 0
chr3:124905978|124906137 hsa-miR-3146 0 1 0
chr7:137876594|137876794 hsa-miR-3146 0 1 0
chr10:43386441|43386546 hsa-miR-3146 0 1 0
chr13:49309252|49309478 hsa-miR-3146 0 1 0
chr14:68789723|68789864 hsa-miR-3146 0 1 0
chr14:22839284|22839374 hsa-miR-3146 0 1 0
chr3:124905995|124906113 hsa-miR-3146 0 1 0
chr1:230682780|230682957 hsa-miR-3146 0 1 0
chr1:51823664|51823751 hsa-miR-3146 0 1 0
chr13:113557115|113557281 hsa-miR-3146 0 1 0
chr13:110659457|110659691 hsa-miR-3146 0 1 0
chr3:183811249|183811466 hsa-miR-3146 0 1 0
chr20:45381035|45381160 hsa-miR-3146 0 1 0
chr15:43432381|43432501 hsa-miR-3146 0 1 0
chr5:205205|205384 hsa-miR-3146 0 1 0
chr19:49450578|49450673 hsa-miR-3146 0 1 0
chr18:46459058|46459225 hsa-miR-3146 1 0 0
chr3:194686478|194686683 hsa-miR-3146 1 0 0
chr12:6375106|6375236 hsa-miR-3146 1 0 0
chr5:134926858|134927079 hsa-miR-3146 1 0 0
chr2:28412298|28412524 hsa-miR-3146 1 0 0
chr16:75412535|75412719 hsa-miR-3146 1 0 0
chr11:58618248|58618374 hsa-miR-3146 1 0 0
chr4:102789144|102789291 hsa-miR-3146 1 0 0
chr22:23296304|23296427 hsa-miR-3146 1 0 0
chr17:63819880|63820287 hsa-miR-3146 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-3146 details
hsa-miR-3146 PPP1R15B protein phosphatase 1 regulatory subunit 15B HGNC:14951 details
hsa-miR-3146 MRPS14 mitochondrial ribosomal protein S14 HGNC:14049 details
hsa-miR-3146 ARL6IP1 ADP ribosylation factor like GTPase 6 interacting protein 1 HGNC:697 details
hsa-miR-3146 details
hsa-miR-3146 PGBD1 piggyBac transposable element derived 1 HGNC:19398 details
hsa-miR-3146 NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 HGNC:29923 details
hsa-miR-3146 details
hsa-miR-3146 CNOT6 CCR4-NOT transcription complex subunit 6 HGNC:14099 details
hsa-miR-3146 WBP2 WW domain binding protein 2 HGNC:12738 details
hsa-miR-3146 XIRP2 xin actin binding repeat containing 2 HGNC:14303 details
hsa-miR-3146 details
hsa-miR-3146 TMX3 thioredoxin related transmembrane protein 3 HGNC:24718 details
hsa-miR-3146 SLC25A36 solute carrier family 25 member 36 HGNC:25554 details
hsa-miR-3146 IRF2BP2 interferon regulatory factor 2 binding protein 2 HGNC:21729 details
hsa-miR-3146 LHFPL5 LHFPL tetraspan subfamily member 5 HGNC:21253 details
hsa-miR-3146 TMEM47 transmembrane protein 47 HGNC:18515 details
hsa-miR-3146 ZNF704 zinc finger protein 704 HGNC:32291 details
hsa-miR-3146 MYLIP myosin regulatory light chain interacting protein HGNC:21155 details
hsa-miR-3146 KLHL15 kelch like family member 15 HGNC:29347 details
hsa-miR-3146 ZNF557 zinc finger protein 557 HGNC:28632 details
hsa-miR-3146 ZSWIM1 zinc finger SWIM-type containing 1 HGNC:16155 details
hsa-miR-3146 PNRC2 proline rich nuclear receptor coactivator 2 HGNC:23158 details
hsa-miR-3146 DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease HGNC:20604 details
hsa-miR-3146 COX6B1 cytochrome c oxidase subunit 6B1 HGNC:2280 details
hsa-miR-3146 IGF2R insulin like growth factor 2 receptor HGNC:5467 details
hsa-miR-3146 STRN striatin HGNC:11424 details
hsa-miR-3146 DMRTB1 DMRT like family B with proline rich C-terminal 1 HGNC:13913 details
hsa-miR-3146 COX6C cytochrome c oxidase subunit 6C HGNC:2285 details
hsa-miR-3146 B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 HGNC:28596 details
hsa-miR-3146 CYFIP2 cytoplasmic FMR1 interacting protein 2 HGNC:13760 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab