miRNA Card

miRNA General Information
miRNA ID hsa-miR-3168
Description Homo sapiens miR-3168 stem-loop
Comment None
Experiment Illumina [1]
Sequence GAGUUCUACAGUCAGAC
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 2 (2 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr17:81510507|81510612 hsa-miR-3168 0 1 0
chr17:81510483|81510612 hsa-miR-3168 0 1 0
chr14:103686227|103686380 hsa-miR-3168 0 1 0
chr17:81510518|81510612 hsa-miR-3168 0 1 0
chr8:143368040|143368179 hsa-miR-3168 0 1 0
chr10:7561357|7561458 hsa-miR-3168 0 1 0
chr8:143368040|143368192 hsa-miR-3168 0 1 0
chr1:161209794|161209939 hsa-miR-3168 0 1 0
chr21:33558681|33558782 hsa-miR-3168 0 1 0
chrX:154398029|154398202 hsa-miR-3168 0 1 0
chr17:61965006|61965123 hsa-miR-3168 0 1 0
chr22:21922883|21923017 hsa-miR-3168 0 1 0
chr17:81510483|81510591 hsa-miR-3168 0 1 0
chrX:53551325|53551462 hsa-miR-3168 0 1 0
chr17:81510483~81510612 hsa-miR-3168 0 1 0
chr8:143368100~143368209 hsa-miR-3168 0 1 0
chr17:81510518~81510612 hsa-miR-3168 0 1 0
chr5:75360748~75360915 hsa-miR-3168 0 1 0
chr1:92843563~92843706 hsa-miR-3168 0 1 0
chr8:143368040~143368192 hsa-miR-3168 0 1 0
chr17:81510483~81510591 hsa-miR-3168 0 1 0
chr17:81510491~81510612 hsa-miR-3168 0 1 0
chr17:81510507~81510612 hsa-miR-3168 0 1 0
chr15:72199457~72199613 hsa-miR-3168 0 1 0
chr8:11802832|11802931 hsa-miR-3168 0 1 0
chr10:73553597|73553794 hsa-miR-3168 0 1 0
chr20:32052316|32071682 hsa-miR-3168 0 1 0
chr16:8850753|8850821 hsa-miR-3168 0 1 0
chr15:74800425|74800746 hsa-miR-3168 0 1 0
chr1:1669664|1734835 hsa-miR-3168 0 1 0
chr19:4448632|4448774 hsa-miR-3168 0 1 0
chr11:130143564|130143763 hsa-miR-3168 0 1 0
chr6:33303763|33303855 hsa-miR-3168 0 1 0
chr18:76358498|76358706 hsa-miR-3168 0 1 0
chr19:39408124|39408341 hsa-miR-3168 0 1 0
chr17:81510425|81510591 hsa-miR-3168 0 1 0
chr8:143368040|143368209 hsa-miR-3168 0 1 0
chr1:116989730|116989896 hsa-miR-3168 0 1 0
chr11:57606149|57606547 hsa-miR-3168 0 1 0
chr3:111885006|111885170 hsa-miR-3168 0 1 0
chr3:169285378|169285521 hsa-miR-3168 0 1 0
chr5:132761494|132761826 hsa-miR-3168 0 1 0
chr1:43975813|43976319 hsa-miR-3168 0 1 0
chr17:15966209|15966359 hsa-miR-3168 0 1 0
chr8:11802795|11802910 hsa-miR-3168 0 1 0
chr20:37518054|37518155 hsa-miR-3168 0 1 0
chr17:72643859|72643980 hsa-miR-3168 0 1 0
chr15:72199506|72199674 hsa-miR-3168 0 1 0
chr15:74800463|74800738 hsa-miR-3168 0 1 0
chr7:2960513|2960646 hsa-miR-3168 0 1 0
chr8:143368024|143368252 hsa-miR-3168 0 1 0
chr10:116889094|116889185 hsa-miR-3168 0 1 0
chr17:1591269|1591424 hsa-miR-3168 0 1 0
chr19:11549763|11549917 hsa-miR-3168 0 1 0
chr7:101211617|101211934 hsa-miR-3168 0 1 0
chr10:28595739|28595881 hsa-miR-3168 0 1 0
chr12:93408822|93409155 hsa-miR-3168 0 1 0
chr3:119828076|119828229 hsa-miR-3168 0 1 0
chr7:129167727|129167867 hsa-miR-3168 0 1 0
chr15:84631625|84631807 hsa-miR-3168 0 1 0
chr15:69447814|69447927 hsa-miR-3168 0 1 0
chr8:11802839|11802931 hsa-miR-3168 0 1 0
chr16:28963898|28964268 hsa-miR-3168 0 1 0
chr2:38302431|38302726 hsa-miR-3168 0 1 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-3168 TRNT1 tRNA nucleotidyl transferase 1 HGNC:17341 details
hsa-miR-3168 RBM24 RNA binding motif protein 24 HGNC:21539 details
hsa-miR-3168 details
hsa-miR-3168 CDCA4 cell division cycle associated 4 HGNC:14625 details
hsa-miR-3168 UBN2 ubinuclein 2 HGNC:21931 details
hsa-miR-3168 SCML2 Scm polycomb group protein like 2 HGNC:10581 details
hsa-miR-3168 CRIM1 cysteine rich transmembrane BMP regulator 1 HGNC:2359 details
hsa-miR-3168 KIF23 kinesin family member 23 HGNC:6392 details
hsa-miR-3168 TMEM117 transmembrane protein 117 HGNC:25308 details
hsa-miR-3168 ZNF264 zinc finger protein 264 HGNC:13057 details
hsa-miR-3168 FRAT2 FRAT regulator of WNT signaling pathway 2 HGNC:16048 details
hsa-miR-3168 UBR3 ubiquitin protein ligase E3 component n-recognin 3 HGNC:30467 details
hsa-miR-3168 SGO1 shugoshin 1 HGNC:25088 details
hsa-miR-3168 RCAN2 regulator of calcineurin 2 HGNC:3041 details
hsa-miR-3168 LANCL1 LanC like 1 HGNC:6508 details
hsa-miR-3168 ZNF763 zinc finger protein 763 HGNC:27614 details
hsa-miR-3168 ANP32E acidic nuclear phosphoprotein 32 family member E HGNC:16673 details
hsa-miR-3168 RPL41 ribosomal protein L41 HGNC:10354 details
hsa-miR-3168 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 HGNC:20363 details
hsa-miR-3168 TTPAL alpha tocopherol transfer protein like HGNC:16114 details
hsa-miR-3168 YY2 YY2 transcription factor HGNC:31684 details
hsa-miR-3168 ZNF175 zinc finger protein 175 HGNC:12964 details
hsa-miR-3168 CCDC93 coiled-coil domain containing 93 HGNC:25611 details
hsa-miR-3168 RBMXL1 RBMX like 1 HGNC:25073 details
hsa-miR-3168 UBQLN1 ubiquilin 1 HGNC:12508 details
hsa-miR-3168 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 HGNC:10833 details
hsa-miR-3168 ATRN attractin HGNC:885 details
hsa-miR-3168 AIFM2 apoptosis inducing factor mitochondria associated 2 HGNC:21411 details
hsa-miR-3168 SEC62 SEC62 homolog, preprotein translocation factor HGNC:11846 details
hsa-miR-3168 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 HGNC:7691 details
hsa-miR-3168 STMP1 short transmembrane mitochondrial protein 1 HGNC:41909 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab