miRNA Card

miRNA General Information
miRNA ID hsa-miR-3618
Description Homo sapiens miR-3618 stem-loop
Comment None
Experiment Illumina [1]
Sequence UGUCUACAUUAAUGAAAAGAGC
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 2 (2 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr20:36752169|36752302 hsa-miR-3618 0 1 0
chr16:11872819|11873022 hsa-miR-3618 0 1 0
chrX:12799231|12799390 hsa-miR-3618 0 1 0
chr14:77508062|77508289 hsa-miR-3618 0 1 0
chr16:2821376|2821496 hsa-miR-3618 0 1 0
chr1:161122180|161122383 hsa-miR-3618 0 1 0
chr14:73280488|73280622 hsa-miR-3618 0 1 0
chr14:77508117|77508282 hsa-miR-3618 0 1 0
chr5:157480154|157480359 hsa-miR-3618 0 1 0
chr5:113593830|113593962 hsa-miR-3618 0 1 0
chr6:5369029|5369182 hsa-miR-3618 0 1 0
chr21:33553603|33553816 hsa-miR-3618 0 1 0
chr11:66564887|66565003 hsa-miR-3618 0 1 0
chr6:122446859|122447237 hsa-miR-3618 0 1 0
chr15:65624636|65624747 hsa-miR-3618 0 1 0
chr1:44879818|44879901 hsa-miR-3618 0 1 0
chr15:39591293|39591588 hsa-miR-3618 0 1 0
chr7:100091064|100091278 hsa-miR-3618 0 1 0
chr7:16586405|16586500 hsa-miR-3618 0 1 0
chr11:62677781|62677964 hsa-miR-3618 0 1 0
chr16:1959661|1959738 hsa-miR-3618 0 1 0
chr4:25412254|25412425 hsa-miR-3618 0 1 0
chr20:5944805|5946447 hsa-miR-3618 0 1 0
chr16:11872819~11873022 hsa-miR-3618 0 1 0
chr17:64503533~64504087 hsa-miR-3618 0 1 0
chr2:207080336~207080511 hsa-miR-3618 0 1 0
chr20:36752169~36752302 hsa-miR-3618 0 1 0
chr11:66564887~66565003 hsa-miR-3618 0 1 0
chrX:12799225~12799390 hsa-miR-3618 0 1 0
chr19:49345507~49345688 hsa-miR-3618 0 1 0
chr7:100091064~100091278 hsa-miR-3618 0 1 0
chr1:150153339~150153482 hsa-miR-3618 0 1 0
chr1:166853737|166853895 hsa-miR-3618 0 1 0
chr12:284614~284757 hsa-miR-3618 0 1 0
chr1:161127551|161127693 hsa-miR-3618 0 1 0
chr15:90920942|90921192 hsa-miR-3618 0 1 0
chr10:5871901|5872207 hsa-miR-3618 0 1 0
chr17:1604524|1604739 hsa-miR-3618 0 1 0
chr1:17434234|17434385 hsa-miR-3618 0 1 0
chr6:52381240|52381426 hsa-miR-3618 0 1 0
chr14:55316350|55316489 hsa-miR-3618 0 1 0
chr6:20454329|20454477 hsa-miR-3618 0 1 0
chr13:29555947|29556098 hsa-miR-3618 0 1 0
chr16:46903397|46903607 hsa-miR-3618 0 1 0
chr2:130374559|130374693 hsa-miR-3618 0 1 0
chr11:121496869|121496983 hsa-miR-3618 0 1 0
chr2:85667106|85667702 hsa-miR-3618 0 1 0
chr20:17941645|17941787 hsa-miR-3618 0 1 0
chr2:85666678|85667159 hsa-miR-3618 0 1 0
chr8:42361096|42361365 hsa-miR-3618 0 1 0
chr15:90920972|90921211 hsa-miR-3618 0 1 0
chr2:207080336|207080518 hsa-miR-3618 0 1 0
chr6:41031274|41031393 hsa-miR-3618 0 1 0
chr13:75713182|75761038 hsa-miR-3618 0 1 0
chr8:130214556|130236994 hsa-miR-3618 0 1 0
chrX:12799207|12799390 hsa-miR-3618 0 1 0
chr8:94705988|94706069 hsa-miR-3618 0 1 0
chr11:119677834|119678559 hsa-miR-3618 0 1 0
chr1:32321920|32322235 hsa-miR-3618 0 1 0
chr7:103102495|103102664 hsa-miR-3618 0 1 0
chr8:94705880|94706069 hsa-miR-3618 0 1 0
chr1:36139760|36140121 hsa-miR-3618 0 1 0
chr1:151364612|151364708 hsa-miR-3618 0 1 0
chr2:61872145|61872299 hsa-miR-3618 0 1 0
chr19:14093052|14093237 hsa-miR-3618 0 1 0
chr9:133153955|133154084 hsa-miR-3618 0 1 0
chr1:62490185|62490320 hsa-miR-3618 0 1 0
chr12:121825207|121825366 hsa-miR-3618 0 1 0
chr5:113593625|113593962 hsa-miR-3618 0 1 0
chr2:27216972|27217132 hsa-miR-3618 -6 1 0
chr15:65664330|65664652 hsa-miR-3618 -5 1 0
chr6:106095615|106095734 hsa-miR-3618 -10 1 0
chr8:94705935|94706069 hsa-miR-3618 0 1 0
chr16:1959574|1959754 hsa-miR-3618 0 1 0
chr6:122446859|122447196 hsa-miR-3618 0 1 0
chr4:118280884|118281070 hsa-miR-3618 0 1 0
chr9:131499810|131499994 hsa-miR-3618 0 1 0
chr5:157480177|157480359 hsa-miR-3618 0 1 0
chr11:83184598|83184731 hsa-miR-3618 0 1 0
chr11:121496869|121513025 hsa-miR-3618 0 1 0
chr1:46009759|46009868 hsa-miR-3618 0 1 0
chr16:1959602|1959754 hsa-miR-3618 0 1 0
chr17:64503533|64504006 hsa-miR-3618 0 1 0
chr17:64503533|64504034 hsa-miR-3618 0 1 0
chr5:177090609|177090874 hsa-miR-3618 0 1 0
chr9:131499810|131500019 hsa-miR-3618 0 1 0
chr19:34401069|34401222 hsa-miR-3618 0 1 0
chr19:47344160|47344276 hsa-miR-3618 0 1 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-3618 GABARAP GABA type A receptor-associated protein HGNC:4067 details
hsa-miR-3618 PGAM4 phosphoglycerate mutase family member 4 HGNC:21731 details
hsa-miR-3618 PDZD8 PDZ domain containing 8 HGNC:26974 details
hsa-miR-3618 MRPL51 mitochondrial ribosomal protein L51 HGNC:14044 details
hsa-miR-3618 RBM33 RNA binding motif protein 33 HGNC:27223 details
hsa-miR-3618 TMPRSS12 transmembrane serine protease 12 HGNC:28779 details
hsa-miR-3618 ZNF527 zinc finger protein 527 HGNC:29385 details
hsa-miR-3618 ARL8B ADP ribosylation factor like GTPase 8B HGNC:25564 details
hsa-miR-3618 PDE4DIP phosphodiesterase 4D interacting protein HGNC:15580 details
hsa-miR-3618 CNBP CCHC-type zinc finger nucleic acid binding protein HGNC:13164 details
hsa-miR-3618 HSBP1 heat shock factor binding protein 1 HGNC:5203 details
hsa-miR-3618 AHI1 Abelson helper integration site 1 HGNC:21575 details
hsa-miR-3618 BBS5 Bardet-Biedl syndrome 5 HGNC:970 details
hsa-miR-3618 ASB16 ankyrin repeat and SOCS box containing 16 HGNC:19768 details
hsa-miR-3618 TRIM42 tripartite motif containing 42 HGNC:19014 details
hsa-miR-3618 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 HGNC:30483 details
hsa-miR-3618 details
hsa-miR-3618 IRF2BP2 interferon regulatory factor 2 binding protein 2 HGNC:21729 details
hsa-miR-3618 ARID1A AT-rich interaction domain 1A HGNC:11110 details
hsa-miR-3618 SOX4 SRY-box transcription factor 4 HGNC:11200 details
hsa-miR-3618 RPL37 ribosomal protein L37 HGNC:10347 details
hsa-miR-3618 KLHL3 kelch like family member 3 HGNC:6354 details
hsa-miR-3618 TIPRL TOR signaling pathway regulator HGNC:30231 details
hsa-miR-3618 SERPINC1 serpin family C member 1 HGNC:775 details
hsa-miR-3618 DDHD1 DDHD domain containing 1 HGNC:19714 details
hsa-miR-3618 FAM126B family with sequence similarity 126 member B HGNC:28593 details
hsa-miR-3618 FZD2 frizzled class receptor 2 HGNC:4040 details
hsa-miR-3618 PUM1 pumilio RNA binding family member 1 HGNC:14957 details
hsa-miR-3618 KLF10 Kruppel like factor 10 HGNC:11810 details
hsa-miR-3618 KLHL36 kelch like family member 36 HGNC:17844 details
hsa-miR-3618 FREM1 FRAS1 related extracellular matrix 1 HGNC:23399 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab